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ClCG06G009200 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G009200
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCholine-phosphate cytidylyltransferase
Genome locationCG_Chr06:15175222..15179474
RNA-Seq ExpressionClCG06G009200
SyntenyClCG06G009200
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035255.1 choline-phosphate cytidylyltransferase [Cucumis melo var. makuwa]8.3e-0754.55Show/hide
Query:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK
        +GW I+Y+RN +E EFE W+ALM++L  V   ++RDKW WN DK
Subjt:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK

KAA0057629.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]1.8e-0948.39Show/hide
Query:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK
        Y LAT+KLS V+N W++  GW    +RN +E+E E  +ALMN++  +   S+RDKW WN DK
Subjt:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK

KAE8649124.1 hypothetical protein Csa_014630 [Cucumis sativus]6.8e-0969.57Show/hide
Query:  TLATHKLSTVNNCWDEQQG--WTITYKRNFKEDEFEGWMALMNILD
        TLA +K STVNN WDEQ G  WTITY+RNFKEDEFE WMAL+ +++
Subjt:  TLATHKLSTVNNCWDEQQG--WTITYKRNFKEDEFEGWMALMNILD

KGN44355.1 hypothetical protein Csa_016666 [Cucumis sativus]4.3e-1153.45Show/hide
Query:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK
        T+ L+TV+N W+++ GW I+Y+RN KE+EFE W+ L N+L  V    TRDKW WN DK
Subjt:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK

TrEMBL top hitse value%identityAlignment
A0A0A0K3T0 Uncharacterized protein2.1e-1153.45Show/hide
Query:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK
        T+ L+TV+N W+++ GW I+Y+RN KE+EFE W+ L N+L  V    TRDKW WN DK
Subjt:  THKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK

A0A5A7T1C2 Choline-phosphate cytidylyltransferase4.0e-0754.55Show/hide
Query:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK
        +GW I+Y+RN +E EFE W+ALM++L  V   ++RDKW WN DK
Subjt:  QGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK

A0A5A7UVQ5 Retrotransposon protein, putative, unclassified8.7e-1048.39Show/hide
Query:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK
        Y LAT+KLS V+N W++  GW    +RN +E+E E  +ALMN++  +   S+RDKW WN DK
Subjt:  YTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCTACTCCTACACATTGGCCACTCACAAGCTGTCCACCGTTAACAATTGTTGGGATGAACAACAAGGATGGACCATCACATACAAAAGGAACTTTAAAGAAGA
TGAATTTGAAGGTTGGATGGCTCTCATGAACATTCTTGATGGAGTTCGGCTGGCCTCCACAAGAGATAAATGGGTTTGGAATCCTGACAAAAAAGTTTTTCTCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCTACTCCTACACATTGGCCACTCACAAGCTGTCCACCGTTAACAATTGTTGGGATGAACAACAAGGATGGACCATCACATACAAAAGGAACTTTAAAGAAGA
TGAATTTGAAGGTTGGATGGCTCTCATGAACATTCTTGATGGAGTTCGGCTGGCCTCCACAAGAGATAAATGGGTTTGGAATCCTGACAAAAAAGTTTTTCTCCACTAA
Protein sequenceShow/hide protein sequence
MKLYSYTLATHKLSTVNNCWDEQQGWTITYKRNFKEDEFEGWMALMNILDGVRLASTRDKWVWNPDKKVFLH