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ClCG06G009290 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G009290
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRibosomal protein S7
Genome locationCG_Chr06:15526000..15526522
RNA-Seq ExpressionClCG06G009290
SyntenyClCG06G009290
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9660742.1 hypothetical protein SADUNF_SadunfMtG0004900 [Salix dunnii]2.9e-2273.49Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
        A+T  DVIKLMVDAIENIKPICEVE           +YRISLEKCSFAEIL+AY KRGI RKKRENLH  A TNRSFAH RWW
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

MBA0790852.1 hypothetical protein [Gossypium harknessii]1.3e-2246.84Show/hide
Query:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------
        ASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPICEVE                          
Subjt:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------

Query:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
                   +YRISLEKCSFAEIL+AY KRGI RKKRENLH  + TNRSFAH RWW
Subjt:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

XP_021840260.1 uncharacterized protein LOC110780146 [Spinacia oleracea]1.1e-2145.91Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  A  NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

XP_023521058.1 uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo]2.3e-3552.97Show/hide
Query:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV
        MER ELADKDGQ RLRNINF AS SKAASNCSEILSYMGGLD                                  AQT  DVIKLMVDA++NIKPICEV
Subjt:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV

Query:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
        E                                     +YRISLEKCSFAEIL+AY KRGI R+KRENLHR A TNRSFAH RWW
Subjt:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

XP_038876459.1 ribosomal protein S7, mitochondrial [Benincasa hispida]3.7e-3351.89Show/hide
Query:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV
        MER ELADKDGQSRL NIN  AS SKAASNCSEILSYMGGLD                                  AQT  DVIKLMVDA+ENIKPICEV
Subjt:  MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEV

Query:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
        +                                     +YRISLEK SF EIL+AY KRGI RKKRENLHR A TNRSFAH RWW
Subjt:  E-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

TrEMBL top hitse value%identityAlignment
A0A142BZ01 Ribosomal protein S71.0e-2056.88Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN
        AQT  DVIKLMVDA+ENIKPICEVE                                     +YRISLEKCSFAEIL+AY KRGI RKKRENLHR A TN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

A0A7J9FZT5 Ribosomal_S7 domain-containing protein6.4e-2346.84Show/hide
Query:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------
        ASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPICEVE                          
Subjt:  ASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE--------------------------

Query:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
                   +YRISLEKCSFAEIL+AY KRGI RKKRENLH  + TNRSFAH RWW
Subjt:  -----------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

A0A803MBG4 Uncharacterized protein2.7e-2144.65Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVD+++NIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  A  NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

A0A803N7E0 Uncharacterized protein5.4e-2245.91Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  A  NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

A0A803N8Z9 Uncharacterized protein5.4e-2245.91Show/hide
Query:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------
        AASNCSEILSYMGGLD                                  A+T  DVIKLMVDA+ENIKPIC+VE                         
Subjt:  AASNCSEILSYMGGLD----------------------------------AQTGCDVIKLMVDAIENIKPICEVE-------------------------

Query:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW
                    +YRISLEKCSF EIL+AY KRGI RKKRENLH  A  NRSFAH RWW
Subjt:  ------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAHCRWW

SwissProt top hitse value%identityAlignment
A7HM56 30S ribosomal protein S71.8e-0634.58Show/hide
Query:  LDAQTGCDVIKLMVDAIENIKPICEVE-------NYRISLE-----KCSFA----------------------EILNAYGKRGIGRKKRENLHRPACTNR
        L  +TG D I++   AIEN+KPI EV         Y++ +E     K + A                      E+LNAY   G   KKRE++H+ A  NR
Subjt:  LDAQTGCDVIKLMVDAIENIKPICEVE-------NYRISLE-----KCSFA----------------------EILNAYGKRGIGRKKRENLHRPACTNR

Query:  SFAHCRW
        +FAH RW
Subjt:  SFAHCRW

P26867 Ribosomal protein S7, mitochondrial2.0e-1341.9Show/hide
Query:  DVIKLMVDAIENIKPICEVENYR--------------------------------------ISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFA
        DVIKL+V+AIEN+KPICEV+  R                                      ISL++C +AEIL A  K GI RKKR++LH+ A  NRSF+
Subjt:  DVIKLMVDAIENIKPICEVENYR--------------------------------------ISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFA

Query:  HCRWW
        H RWW
Subjt:  HCRWW

P92557 Ribosomal protein S7, mitochondrial2.8e-2052.29Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN
        A+T  DVIKLMVDA+ENIKPICEV                                      +YRISLEKCSFAEIL+AY KRG  R+KRENLH  A TN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

Q01902 Ribosomal protein S7, mitochondrial1.7e-2052.29Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN
        A+T  DVIKLMVDA++NIKPICEV                                      +YRISLEKCSFAEIL+AY KRGI RK+RENLH  A TN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

Q9MF82 Ribosomal protein S7, mitochondrial1.8e-1950.46Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN
        A+T  DVIKLM+DA+ENIKPIC+VE                                     +YRISLEKC F EIL+AY KRGI RKKRENLH  A  N
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein2.0e-2152.29Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN
        A+T  DVIKLMVDA+ENIKPICEV                                      +YRISLEKCSFAEIL+AY KRG  R+KRENLH  A TN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW

ATMG01270.1 mitochondrial ribosomal protein S72.0e-2152.29Show/hide
Query:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN
        A+T  DVIKLMVDA+ENIKPICEV                                      +YRISLEKCSFAEIL+AY KRG  R+KRENLH  A TN
Subjt:  AQTGCDVIKLMVDAIENIKPICEVE-------------------------------------NYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTN

Query:  RSFAHCRWW
        RSFAH RWW
Subjt:  RSFAHCRWW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTA
TATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAG
AGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTGCACCAATCGAAGTTTCGCGCAT
TGTAGATGGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAGAGGAGTTGGCTGATAAAGATGGACAGTCACGATTGCGTAATATCAATTTCTTGGCCTCGCCATCGAAAGCAGCTTCCAATTGTTCAGAAATTCTAAGCTA
TATGGGGGGGTTGGATGCTCAAACTGGATGCGATGTAATCAAACTTATGGTTGATGCCATAGAGAATATAAAGCCCATATGCGAAGTCGAAAACTACAGGATAAGCTTAG
AGAAATGTTCATTTGCTGAGATACTGAATGCTTACGGAAAGAGGGGAATTGGACGTAAGAAAAGGGAGAATCTTCATAGACCTGCTTGCACCAATCGAAGTTTCGCGCAT
TGTAGATGGTGGTAA
Protein sequenceShow/hide protein sequence
MEREELADKDGQSRLRNINFLASPSKAASNCSEILSYMGGLDAQTGCDVIKLMVDAIENIKPICEVENYRISLEKCSFAEILNAYGKRGIGRKKRENLHRPACTNRSFAH
CRWW