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ClCG06G009705 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G009705
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionFerredoxin--NADP reductase, chloroplastic
Genome locationCG_Chr06:18968664..18974885
RNA-Seq ExpressionClCG06G009705
SyntenyClCG06G009705
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0004324 - ferredoxin-NADP+ reductase activity (molecular function)
InterPro domainsIPR015701 - Ferredoxin--NADP reductase
IPR017938 - Riboflavin synthase-like beta-barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004231567.1 ferredoxin--NADP reductase, root-type isozyme, chloroplastic [Solanum lycopersicum]7.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

XP_006363650.1 PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [Solanum tuberosum]7.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

XP_008439552.1 PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic [Cucumis melo]5.9e-1983.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNGICS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

XP_015162905.1 PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic isoform X2 [Solanum tuberosum]7.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

XP_026450338.1 ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Papaver somniferum]7.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

TrEMBL top hitse value%identityAlignment
A0A0V0I3K7 Ferredoxin--NADP reductase, chloroplastic3.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

A0A1S3AZN4 Ferredoxin--NADP reductase, chloroplastic2.8e-1983.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNGICS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

A0A2G2XDK9 Ferredoxin--NADP reductase, chloroplastic3.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

A0A4Y7IZA4 Ferredoxin--NADP reductase, chloroplastic3.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

M1AUU9 Ferredoxin--NADP reductase, chloroplastic3.7e-1981.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

SwissProt top hitse value%identityAlignment
O04397 Ferredoxin--NADP reductase, root-type isozyme, chloroplastic1.1e-2078.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LY IASTRY  SFDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

P41345 Ferredoxin--NADP reductase, root isozyme, chloroplastic1.5e-2076.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY  SFDG+T SLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

Q41014 Ferredoxin--NADP reductase, root isozyme, chloroplastic5.0e-2180Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP SP NV LYSIASTRY  +FDGKTASLCV RAVYYDP TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

Q9M0V6 Ferredoxin--NADP reductase, root isozyme 1, chloroplastic2.5e-2076.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY  SFDGKTASLCV RA+YYDP+TGK+DPSK G+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

Q9S9P8 Ferredoxin--NADP reductase, root isozyme 2, chloroplastic1.1e-2078.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

Arabidopsis top hitse value%identityAlignment
AT1G30510.1 root FNR 27.9e-2278.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

AT1G30510.2 root FNR 27.9e-2278.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

AT1G30510.3 root FNR 27.9e-2278.33Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY   FDGKTASLCV RAVYYDP+TGK+DPSKNG+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

AT4G05390.1 root FNR 11.8e-2176.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY  SFDGKTASLCV RA+YYDP+TGK+DPSK G+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS

AT4G05390.2 root FNR 11.8e-2176.67Show/hide
Query:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS
        P GEN KKP +P NV LYSIASTRY  SFDGKTASLCV RA+YYDP+TGK+DPSK G+CS
Subjt:  PKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGTGCAACAAGCAAGTGCACCAAAGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTCTCTACTCAATTGCGTCAACTAGGTATAAAGCTTCTTT
TGATGGAAAGACTGCTAGTTTATGTGTTCCCCGTGCCGTTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGCAGCAAAGAACGGAATATGT
TGAAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGTGCAACAAGCAAGTGCACCAAAGGGTGAAAACCTGAAGAAACCTAAGAGTCCACGCAATGTTTGTCTCTACTCAATTGCGTCAACTAGGTATAAAGCTTCTTT
TGATGGAAAGACTGCTAGTTTATGTGTTCCCCGTGCCGTTTATTATGACCCTAAAACTGGAAAGGATGATCCTTCAAAGAACGGAATATGCAGCAAAGAACGGAATATGT
TGAAGTTCTAA
Protein sequenceShow/hide protein sequence
MSVQQASAPKGENLKKPKSPRNVCLYSIASTRYKASFDGKTASLCVPRAVYYDPKTGKDDPSKNGICSKERNMLKF