| GenBank top hits | e value | %identity | Alignment |
|---|
| PIM97577.1 DNA-directed DNA polymerase [Handroanthus impetiginosus] | 1.3e-130 | 56.28 | Show/hide |
Query: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
S PWYADIVNYL C P +L+AQQKKK ++++ Y WD+P+L++ G D+ILRRCVPE E + IL CH +PYGGHF G
Subjt: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
Query: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
++ QRT NIS ++EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V F+KK IF+RFGTPRAIISD
Subjt: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
Query: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
GT F NR LL+K+ V H+++T YHPQT+GQ E++NREIK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Subjt: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
Query: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
A+GE R LQLNEL E+R AYENAK+YKE+ K+WH+K I ++ GQ VLLFNS+L+LFPGKLKSRWSGPF I EV PHGAV+L N++
Subjt: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
Query: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
FKVN QR+K Y E ++ + SI L++
Subjt: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
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| PIN14790.1 DNA-directed DNA polymerase [Handroanthus impetiginosus] | 7.0e-129 | 56.05 | Show/hide |
Query: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
S PWYADIVNYL C P +L+AQQKKK+ ++++ Y WD+ +L++ G D+ILRRCVPE E + IL CH +PYGGHF G
Subjt: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
Query: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
++ QRT NIS ++EMPLN++LEVELFDVWGIDFMG F PS GN YILVAVDYVSKWVEA A ND+ V F+KK IF+RFGTPRAIIS+
Subjt: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
Query: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
GT F NR LL+K+ V H+++T YHPQT+GQ E++NREIK ILEK VS++RKDW +RLDEALWAYRTAFKTPIGMSPY L
Subjt: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
Query: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
A+GE R LQLNEL E+R AYENAK+YKE+TK+WHDK I ++ GQ VLLFNS+L+LFPGKLKSRWSGPF + EV HGAV+L NE+
Subjt: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
Query: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
FKVN QR+K Y ++ TSI L+E
Subjt: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
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| PNY03357.1 hypothetical protein L195_g026684, partial [Trifolium pratense] | 2.3e-127 | 55.29 | Show/hide |
Query: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
PW+AD NY+V P + +QQ+KK ++ KFY WDEP+LY+ G D +LRRCVPE E +L CH++ YGGHF G
Subjt: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
Query: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
++ QRT NIS +NEMP N +LEVE+FDVWGIDFMGPFP S YILVAVDYVSKWVEA A NDA V FLKK IFSRFG PRA+ISDEGT
Subjt: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
Query: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYA----------------------
F+NR + LL K+NV HR+AT YHPQT+GQ E++NR+IK ILEK V++SRKDW +LD+ALWAYRTAFKTPIGMSP+
Subjt: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYA----------------------
Query: -----LDASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
L +GE+R LQL+EL E+R+ AYENAK++KE+TKKWHDK I + GQ VLLFNS+L+LFPGKLKSRWSGPF IK+V PHGAV+L + D +
Subjt: -----LDASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
Query: FKVNGQRVKPYHIEELEIEKTSIDL
FKVNGQR+KPY +E + + SI L
Subjt: FKVNGQRVKPYHIEELEIEKTSIDL
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| WP_217833161.1 DDE-type integrase/transposase/recombinase, partial [Synechococcus sp. PCC 7002] | 8.0e-149 | 77.62 | Show/hide |
Query: MNAESQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR---------------
M A+SQEPWY DIVNYLVCNQWPEE NA QKKKL++ESKFYCWDEPYLYRLG DHILRRCVPEYETHSIL+SCHEAPYGGHFGG+
Subjt: MNAESQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR---------------
Query: ------------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI
++ QRT NISN+NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI
Subjt: ------------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI
Query: ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL--------------
ISDEGT FINRIITNLLTKFNVSHRVAT YHPQTN QAEITN+EIKSILEKVVSTSRKDW ERLDEALWAYRT FKTPIGMSPYAL
Subjt: ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL--------------
Query: -------------DASGEARKLQLNELLEWRHSAYENAKLYKER
DASGEARKLQLNEL+EWRHSAYENAKLYKE+
Subjt: -------------DASGEARKLQLNELLEWRHSAYENAKLYKER
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| XP_012842899.1 PREDICTED: uncharacterized protein LOC105963074 [Erythranthe guttata] | 1.7e-127 | 55.83 | Show/hide |
Query: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
PWYAD+ N+L P++L+ QKKK ++S+FY WDEP L+R G D ++RRCVPE E IL CH +P GGH G
Subjt: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
Query: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
++ QRT N+SN+++MPLN+M EVELFDVWGIDFMGPFP S G YIL+AVDYVSKWVEA A NDA TV KF K IFSRFGTPRAIISDEG+
Subjt: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
Query: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL---------------------
F N+++TNL K + H++A YHPQTNG AE++NREIK ILEK VST+RKDW +LD+ALWAYRTAFKTPIGMSPY L
Subjt: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL---------------------
Query: ------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
A+G+ R LQLNE+ E+R+ AYENAK+YKE+TKKWHDK I+K+ G +VLLFNS+LRLFPGKLKSRWSGPF++ V+P G +++ DG S
Subjt: ------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
Query: FKVNGQRVKPYH
FKVNGQRVK Y+
Subjt: FKVNGQRVKPYH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2G9FWY3 Reverse transcriptase | 6.2e-131 | 56.28 | Show/hide |
Query: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
S PWYADIVNYL C P +L+AQQKKK ++++ Y WD+P+L++ G D+ILRRCVPE E + IL CH +PYGGHF G
Subjt: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
Query: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
++ QRT NIS ++EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V F+KK IF+RFGTPRAIISD
Subjt: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
Query: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
GT F NR LL+K+ V H+++T YHPQT+GQ E++NREIK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Subjt: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
Query: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
A+GE R LQLNEL E+R AYENAK+YKE+ K+WH+K I ++ GQ VLLFNS+L+LFPGKLKSRWSGPF I EV PHGAV+L N++
Subjt: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
Query: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
FKVN QR+K Y E ++ + SI L++
Subjt: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
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| A0A2G9G6G2 Reverse transcriptase | 2.4e-127 | 55.09 | Show/hide |
Query: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
S PWYADIVNYL C P +L+ QQKKK+ ++++ Y W++P+L + G D+ILRRCVPE E + IL CH +PYGGHF G
Subjt: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
Query: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
++ QRT NIS ++EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V F+KK IF+RFGTPRAIISD
Subjt: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
Query: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
T F NR LL+K+ V H++ T YHPQT+G E++NREIK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Subjt: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
Query: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
A+GE R LQLNEL E+R AYENAK+YKE+TK+WHDK I ++ GQ VLLFNS+L+LFPGKLKSRW G F I EV PHGAV+L NE+
Subjt: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
Query: TTSFKVNGQRVKPYHIEELEIEKTSIDLHECN
FK+N +R+K Y ++ + TSI L++ N
Subjt: TTSFKVNGQRVKPYHIEELEIEKTSIDLHECN
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| A0A2G9HBV9 DNA-directed DNA polymerase | 3.4e-129 | 56.05 | Show/hide |
Query: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
S PWYADIVNYL C P +L+AQQKKK+ ++++ Y WD+ +L++ G D+ILRRCVPE E + IL CH +PYGGHF G
Subjt: SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR-------------------
Query: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
++ QRT NIS ++EMPLN++LEVELFDVWGIDFMG F PS GN YILVAVDYVSKWVEA A ND+ V F+KK IF+RFGTPRAIIS+
Subjt: --------EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDE
Query: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
GT F NR LL+K+ V H+++T YHPQT+GQ E++NREIK ILEK VS++RKDW +RLDEALWAYRTAFKTPIGMSPY L
Subjt: GTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------
Query: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
A+GE R LQLNEL E+R AYENAK+YKE+TK+WHDK I ++ GQ VLLFNS+L+LFPGKLKSRWSGPF + EV HGAV+L NE+
Subjt: ---------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDG
Query: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
FKVN QR+K Y ++ TSI L+E
Subjt: TTSFKVNGQRVKPYHIEELEIEKTSIDLHE
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| A0A2K3NJZ5 Integrase catalytic domain-containing protein (Fragment) | 1.1e-127 | 55.29 | Show/hide |
Query: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
PW+AD NY+V P + +QQ+KK ++ KFY WDEP+LY+ G D +LRRCVPE E +L CH++ YGGHF G
Subjt: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
Query: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
++ QRT NIS +NEMP N +LEVE+FDVWGIDFMGPFP S YILVAVDYVSKWVEA A NDA V FLKK IFSRFG PRA+ISDEGT
Subjt: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
Query: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYA----------------------
F+NR + LL K+NV HR+AT YHPQT+GQ E++NR+IK ILEK V++SRKDW +LD+ALWAYRTAFKTPIGMSP+
Subjt: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYA----------------------
Query: -----LDASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
L +GE+R LQL+EL E+R+ AYENAK++KE+TKKWHDK I + GQ VLLFNS+L+LFPGKLKSRWSGPF IK+V PHGAV+L + D +
Subjt: -----LDASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
Query: FKVNGQRVKPYHIEELEIEKTSIDL
FKVNGQR+KPY +E + + SI L
Subjt: FKVNGQRVKPYHIEELEIEKTSIDL
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| A0A4Y1RSJ3 Transposable element protein | 1.6e-126 | 54.57 | Show/hide |
Query: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
PWYAD VNYL C P +++ QKKK K Y WD+PYL++ G D ++RRCVPE E IL CH GGH+G
Subjt: PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETHSILRSCHEAPYGGHFGGR----------------------
Query: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
+ QRT NIS++N+MPLN++LEVELFDVWGIDFMGPFP S GN YILVAVDYVSKWVEAAA NDA V +FL+K IF+RFG PRAIISD GT
Subjt: -----EQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTD
Query: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL---------------------
F NR +LL K+ ++H+V+T YHPQT+GQ E++NRE+K ILEK VS SRKDW +LD+ALWAYRTAFK PIGMSPY L
Subjt: FINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL---------------------
Query: ------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
++GE RKLQLNEL E R+ +YENAK+YK+RTKKWHDK+I KK YVGQ VLL+NS+L+LFPGKL+SRWSGPF + V P+G V++ N+ T+
Subjt: ------DASGEARKLQLNELLEWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDGTTS
Query: FKVNGQRVKPYHIEELEIEKTSIDLHE
FKVNG R+KPY E+T+I L +
Subjt: FKVNGQRVKPYHIEELEIEKTSIDLHE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P08361 Gag-Pol polyprotein | 1.1e-18 | 35.37 | Show/hide |
Query: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
W IDF P G +Y+LV VD S W+EA K A V+K L ++IF RFG P+ + +D G F++++ + + ++ Y PQ++GQ E
Subjt: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
Query: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
NR IK L K+ ++T +DW+ L AL+ R P G++PY +
Subjt: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
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| P26808 Gag-Pol polyprotein | 6.2e-19 | 36.73 | Show/hide |
Query: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
W IDF P G +Y+LV VD S WVEA K A V+K L ++IF RFG P+ + +D G F++++ + V ++ Y PQ++GQ E
Subjt: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
Query: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
NR IK L K+ ++T +DW+ L AL+ R P G++PY +
Subjt: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
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| P26809 Gag-Pol polyprotein | 8.1e-19 | 36.05 | Show/hide |
Query: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
W IDF P G +Y+LV +D S WVEA K A V+K L ++IF RFG P+ + +D G F++++ + V ++ Y PQ++GQ E
Subjt: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
Query: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
NR IK L K+ ++T +DW+ L AL+ R P G++PY +
Subjt: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
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| P26810 Gag-Pol polyprotein | 6.2e-19 | 36.73 | Show/hide |
Query: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
W IDF P G +Y+LV VD S WVEA K A V+K L ++IF RFG P+ + +D G F++++ + V ++ Y PQ++GQ E
Subjt: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
Query: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
NR IK L K+ ++T +DW+ L AL+ R P G++PY +
Subjt: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
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| P31792 Pol polyprotein (Fragment) | 1.8e-18 | 36.73 | Show/hide |
Query: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
W IDF P G +Y+LV VD S WVEA + A+ V+K + ++IF RFG P+ I SD G F++++ L ++ ++ Y PQ++GQ E
Subjt: WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI
Query: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
NR IK L K+ + T KDW L AL R G++PY +
Subjt: TNREIKSILEKV-VSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL
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