; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G010330 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G010330
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCG_Chr06:21896075..21905427
RNA-Seq ExpressionClCG06G010330
SyntenyClCG06G010330
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036163 - Heavy metal-associated domain superfamily
IPR043502 - DNA/RNA polymerase superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.4e-18447.2Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------
        IWGPAP  TV+GYRYFV+                                                                                  
Subjt:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------

Query:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------
                          P+ F  E ALTSVYVINRLPS V +N+SPFERLY          V      V+     +  L P                  
Subjt:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------

Query:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----
                      V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P  EPE  P+RRST    
Subjt:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----

Query:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------
                                 A TNPLWQQAM+ ELQAL KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER                     
Subjt:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------

Query:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ
                    LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQ
Subjt:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ

Query:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL
        T +                                                                                   D NVRLTPFDGVPL
Subjt:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL

Query:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI
        EDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPTDRRSTTGYCFYLG++LI
Subjt:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI

Query:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        S RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DMGAPQ S TILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

KAA0041166.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.8e-17852.15Show/hide
Query:  MIGMGRKVGRLFELTSFQPPN-LPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  +  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQPPN-LPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSPVT---NNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPS
        IWGPAP  TV+          F   L     + +   P T   N  +  +  ++L+         S+   L     P +      L    T+++  N   
Subjt:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSPVT---NNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPS

Query:  SDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDL
        S          QL +S    A  DL S P  EPE  PIRRST                             A TNPLW+QAM+ ELQAL KTHTWDY+DL
Subjt:  SDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDL

Query:  PPGKKPIGCNWIYKIKTHSDGSIER---------------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPP
        PPGKKPIGC WI+KIKTHSDGSIER                                 LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPP
Subjt:  PPGKKPIGCNWIYKIKTHSDGSIER---------------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPP

Query:  QKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTTH---------------------------------------------------
        QKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQT +                                                   
Subjt:  QKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTTH---------------------------------------------------

Query:  --------------------------------DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK-
                                        D NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP IAYA+H+V+QFMAAPRTIHFTVVLRILRY+K 
Subjt:  --------------------------------DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK-

Query:  -------------------------GDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNR
                                 GDPTDRRSTTGYCFYLG++LIS RSKKQ+VVSRSSTESEY AL D T+EL+WLRWLL DMGAPQ S TILHCDN 
Subjt:  -------------------------GDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNR

Query:  SAIQIDHNDVFHERTKHIEND
        SAIQI HNDVFHERTKHIEND
Subjt:  SAIQIDHNDVFHERTKHIEND

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.4e-18447.2Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------
        IWGPAP  TV+GYRYFV+                                                                                  
Subjt:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------

Query:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------
                          P+ F  E ALTSVYVINRLPS V +N+SPFERLY          V      V+     +  L P                  
Subjt:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------

Query:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----
                      V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P  EPE  P+RRST    
Subjt:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----

Query:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------
                                 A TNPLWQQAM+ ELQAL KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER                     
Subjt:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------

Query:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ
                    LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQ
Subjt:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ

Query:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL
        T +                                                                                   D NVRLTPFDGVPL
Subjt:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL

Query:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI
        EDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPTDRRSTTGYCFYLG++LI
Subjt:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI

Query:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        S RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DMGAPQ S TILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.0e-17949.49Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSP-------------------VTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP-
        IWGPAP  TV+          F   L     + +   P                   V +N+SPFERLY          V      V+     +  L P 
Subjt:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSP-------------------VTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP-

Query:  -------------------------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAP
                                       V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P
Subjt:  -------------------------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAP

Query:  SAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER----
          EPE  P+RRST                             A TNPLWQQAM+ ELQAL+KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER    
Subjt:  SAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER----

Query:  -----------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTIT
                                     LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTIT
Subjt:  -----------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTIT

Query:  QLGFTSSSHDSTFFTRQTTH--------------------------------------------------------------------------------
        QLGFTSSSHDS  FTRQT +                                                                                
Subjt:  QLGFTSSSHDSTFFTRQTTH--------------------------------------------------------------------------------

Query:  ---DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPT
           D NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPT
Subjt:  ---DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPT

Query:  DRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        DRRSTTGYCFYLG++LIS RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DM APQ S  ILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  DRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.4e-18447.2Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------
        IWGPAP  TV+GYRYFV+                                                                                  
Subjt:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------

Query:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------
                          P+ F  E ALTSVYVINRLPS V +N+SPFERLY          V      V+     +  L P                  
Subjt:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------

Query:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----
                      V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P  EPE  P+RRST    
Subjt:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----

Query:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------
                                 A TNPLWQQAM+ ELQAL KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER                     
Subjt:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------

Query:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ
                    LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQ
Subjt:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ

Query:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL
        T +                                                                                   D NVRLTPFDGVPL
Subjt:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL

Query:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI
        EDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPTDRRSTTGYCFYLG++LI
Subjt:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI

Query:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        S RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DMGAPQ S TILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-18447.2Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------
        IWGPAP  TV+GYRYFV+                                                                                  
Subjt:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------

Query:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------
                          P+ F  E ALTSVYVINRLPS V +N+SPFERLY          V      V+     +  L P                  
Subjt:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------

Query:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----
                      V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P  EPE  P+RRST    
Subjt:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----

Query:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------
                                 A TNPLWQQAM+ ELQAL KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER                     
Subjt:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------

Query:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ
                    LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQ
Subjt:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ

Query:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL
        T +                                                                                   D NVRLTPFDGVPL
Subjt:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL

Query:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI
        EDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPTDRRSTTGYCFYLG++LI
Subjt:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI

Query:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        S RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DMGAPQ S TILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

A0A5A7TGJ6 Putative mitochondrial protein8.7e-17952.15Show/hide
Query:  MIGMGRKVGRLFELTSFQPPN-LPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  +  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQPPN-LPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSPVT---NNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPS
        IWGPAP  TV+          F   L     + +   P T   N  +  +  ++L+         S+   L     P +      L    T+++  N   
Subjt:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSPVT---NNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPS

Query:  SDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDL
        S          QL +S    A  DL S P  EPE  PIRRST                             A TNPLW+QAM+ ELQAL KTHTWDY+DL
Subjt:  SDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDL

Query:  PPGKKPIGCNWIYKIKTHSDGSIER---------------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPP
        PPGKKPIGC WI+KIKTHSDGSIER                                 LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPP
Subjt:  PPGKKPIGCNWIYKIKTHSDGSIER---------------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPP

Query:  QKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTTH---------------------------------------------------
        QKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQT +                                                   
Subjt:  QKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTTH---------------------------------------------------

Query:  --------------------------------DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK-
                                        D NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP IAYA+H+V+QFMAAPRTIHFTVVLRILRY+K 
Subjt:  --------------------------------DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK-

Query:  -------------------------GDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNR
                                 GDPTDRRSTTGYCFYLG++LIS RSKKQ+VVSRSSTESEY AL D T+EL+WLRWLL DMGAPQ S TILHCDN 
Subjt:  -------------------------GDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNR

Query:  SAIQIDHNDVFHERTKHIEND
        SAIQI HNDVFHERTKHIEND
Subjt:  SAIQIDHNDVFHERTKHIEND

A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-943.9e-17949.49Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSP-------------------VTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP-
        IWGPAP  TV+          F   L     + +   P                   V +N+SPFERLY          V      V+     +  L P 
Subjt:  IWGPAPTTTVHGYRYFVVPKNFEVALTSVYVINRLPSP-------------------VTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP-

Query:  -------------------------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAP
                                       V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P
Subjt:  -------------------------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAP

Query:  SAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER----
          EPE  P+RRST                             A TNPLWQQAM+ ELQAL+KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER    
Subjt:  SAEPEPTPIRRST----------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER----

Query:  -----------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTIT
                                     LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTIT
Subjt:  -----------------------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTIT

Query:  QLGFTSSSHDSTFFTRQTTH--------------------------------------------------------------------------------
        QLGFTSSSHDS  FTRQT +                                                                                
Subjt:  QLGFTSSSHDSTFFTRQTTH--------------------------------------------------------------------------------

Query:  ---DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPT
           D NVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPT
Subjt:  ---DSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPT

Query:  DRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        DRRSTTGYCFYLG++LIS RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DM APQ S  ILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  DRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-18447.2Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------
        IWGPAP  TV+GYRYFV+                                                                                  
Subjt:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------

Query:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------
                          P+ F  E ALTSVYVINRLPS V +N+SPFERLY          V      V+     +  L P                  
Subjt:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------

Query:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----
                      V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P  EPE  P+RRST    
Subjt:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----

Query:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------
                                 A TNPLWQQAM+ ELQAL KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER                     
Subjt:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------

Query:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ
                    LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQ
Subjt:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ

Query:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL
        T +                                                                                   D NVRLTPFDGVPL
Subjt:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL

Query:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI
        EDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPTDRRSTTGYCFYLG++LI
Subjt:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI

Query:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        S RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DMGAPQ S TILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-18447.2Show/hide
Query:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD
        +IG GRKVGRLFELTS Q  P  P+I+A   D  L+QWHL LGHASS KLR+L S G LN+VS+F+ FDC HCK+AKQPALSFP S SLCD PFGLIH D
Subjt:  MIGMGRKVGRLFELTSFQ-PPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFD

Query:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------
        IWGPAP  TV+GYRYFV+                                                                                  
Subjt:  IWGPAPTTTVHGYRYFVV----------------------------------------------------------------------------------

Query:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------
                          P+ F  E ALTSVYVINRLPS V +N+SPFERLY          V      V+     +  L P                  
Subjt:  ------------------PKNF--EVALTSVYVINRLPSPVTNNLSPFERLY----------VLNIKAIVVGIPSLNVYLAP------------------

Query:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----
                      V        S L   H S           ST LFPT D  S+  +  P   +L +S    A  +L S P  EPE  P+RRST    
Subjt:  --------------VMLPSRNTHSPL--LHQS-----------STNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSDLSSAPSAEPEPTPIRRST----

Query:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------
                                 A TNPLWQQAM+ ELQAL KTHTWDY+DLPPGKKPIGC WI+KIKTHSDGSIER                     
Subjt:  ------------------------WACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------

Query:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ
                    LLA+AAAKQWPLLQMD+KNAFLNGTLSEEV++KPPP TTPPPQKVCLLRRALY LKQAPRAWFATFSSTITQLGFTSSSHDS  FTRQ
Subjt:  ------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ

Query:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL
        T +                                                                                   D NVRLTPFDGVPL
Subjt:  TTH-----------------------------------------------------------------------------------DSNVRLTPFDGVPL

Query:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI
        EDPTLYRQLVGSLIYLTVTRP IAYAVH+V+QFMAAPRTIHFT VLRILRY+K                          GDPTDRRSTTGYCFYLG++LI
Subjt:  EDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK--------------------------GDPTDRRSTTGYCFYLGNSLI

Query:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        S RSKKQ+VVSRSSTESEY ALAD TSEL+WLRWLL DMGAPQ S TILHCDN SAIQI HNDVFHERTKHIEND
Subjt:  SRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.9e-2623.71Show/hide
Query:  WQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDG---------------------------------SIERLLAVAAAKQWPLLQMDMKN
        W++A+N EL A +  +TW     P  K  +   W++ +K +  G                                 S   +L++       + QMD+K 
Subjt:  WQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDG---------------------------------SIERLLAVAAAKQWPLLQMDMKN

Query:  AFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFF-----------------------TRQTTHDSNVR
        AFLNGTL EE++++ P   +     VC L +A+Y LKQA R WF  F   + +  F +SS D   +                       T   T  +N +
Subjt:  AFLNGTLSEEVHIKPPPDTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFF-----------------------TRQTTHDSNVR

Query:  --------------LTPFDGVPLE--DPTLY---------------------------------------------RQLVGSLIYLTV-TRPGIAYAVHV
                      +  F G+ +E  +  +Y                                             R L+G L+Y+ + TRP +  AV++
Subjt:  --------------LTPFDGVPLE--DPTLY---------------------------------------------RQLVGSLIYLTV-TRPGIAYAVHV

Query:  VNQFMAAPRTIHFTVVLRILRYVK----------------------------GDPTDRRSTTGYCFYLGN-SLISRRSKKQTVVSRSSTESEYCALADTT
        ++++ +   +  +  + R+LRY+K                            G   DR+STTGY F + + +LI   +K+Q  V+ SSTE+EY AL +  
Subjt:  VNQFMAAPRTIHFTVVLRILRYVK----------------------------GDPTDRRSTTGYCFYLGN-SLISRRSKKQTVVSRSSTESEYCALADTT

Query:  SELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIE
         E LWL++LL  +     +   ++ DN+  I I +N   H+R KHI+
Subjt:  SELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIE

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-3426.16Show/hide
Query:  QAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSD---------------------------------GSIERLLAVAAAKQWPLLQMDMKNAF
        +AM EE+++L+K  T+  ++LP GK+P+ C W++K+K   D                                  SI  +L++AA+    + Q+D+K AF
Subjt:  QAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSD---------------------------------GSIERLLAVAAAKQWPLLQMDMKNAF

Query:  LNGTLSEEVHIKPPP--DTTPPPQKVCLLRRALYELKQAPRAWFATFSSTI-TQLGFTSSSHDSTFFTRQTTHDSNVRLTPFDGV---------------
        L+G L EE++++ P   +       VC L ++LY LKQAPR W+  F S + +Q    + S    +F R + ++  + L   D +               
Subjt:  LNGTLSEEVHIKPPP--DTTPPPQKVCLLRRALYELKQAPRAWFATFSSTI-TQLGFTSSSHDSTFFTRQTTHDSNVRLTPFDGV---------------

Query:  ----------------------------------------------------PLEDPTL------------------------YRQLVGSLIYLTV-TRP
                                                            P+  P                          Y   VGSL+Y  V TRP
Subjt:  ----------------------------------------------------PLEDPTL------------------------YRQLVGSLIYLTV-TRP

Query:  GIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK-------------------------GDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCAL
         IA+AV VV++F+  P   H+  V  ILRY++                         GD  +R+S+TGY F      IS +SK Q  V+ S+TE+EY A 
Subjt:  GIAYAVHVVNQFMAAPRTIHFTVVLRILRYVK-------------------------GDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCAL

Query:  ADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIE
         +T  E++WL+  L ++G  Q    +++CD++SAI +  N ++H RTKHI+
Subjt:  ADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIE

P92519 Uncharacterized mitochondrial protein AtMg008108.7e-1943.85Show/hide
Query:  DPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGD--------------------------PTDRRSTTGYCFYLGNSLIS
        DP+ +R +VG+L YLT+TRP I+YAV++V Q M  P    F ++ R+LRYVKG                            + RRSTTG+C +LG ++IS
Subjt:  DPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGD--------------------------PTDRRSTTGYCFYLGNSLIS

Query:  RRSKKQTVVSRSSTESEYCALADTTSELLW
          +K+Q  VSRSSTE+EY ALA T +EL W
Subjt:  RRSKKQTVVSRSSTESEYCALADTTSELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-4930.93Show/hide
Query:  LSSAPSAEPEPTPIRRSTWACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPI-GCNWIYKIKTHSDGSIER--------------------------
        L+ + +AE EP   R +  A  +  W+ AM  E+ A    HTWD +  PP    I GC WI+  K +SDGS+ R                          
Subjt:  LSSAPSAEPEPTPIRRSTWACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPI-GCNWIYKIKTHSDGSIER--------------------------

Query:  -------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPD--TTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ---
               +L VA  + WP+ Q+D+ NAFL GTL+++V++  PP       P  VC LR+ALY LKQAPRAW+    + +  +GF +S  D++ F  Q   
Subjt:  -------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPD--TTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQ---

Query:  --------------TTHDSNV------------------------------------------------------------------RLTPFDGVPLEDP
                      T +D  +                                                                  +L+ + G  L DP
Subjt:  --------------TTHDSNV------------------------------------------------------------------RLTPFDGVPLEDP

Query:  TLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGDPT--------------------------DRRSTTGYCFYLGNSLISRR
        T YR +VGSL YL  TRP I+YAV+ ++QFM  P   H   + RILRY+ G P                           D  ST GY  YLG+  IS  
Subjt:  TLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGDPT--------------------------DRRSTTGYCFYLGNSLISRR

Query:  SKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
        SKKQ  V RSSTE+EY ++A+T+SE+ W+  LL ++G       +++CDN  A  +  N VFH R KHI  D
Subjt:  SKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.3e-5028.72Show/hide
Query:  SPVTNNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPSSD--------PETHIPPAPQLNQSTFIDASSDLSSAPSA
        SP+ NN +P                PS N       LP     SP +   ST++   N PSS         P    PP  Q+N    ++  S  + A   
Subjt:  SPVTNNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPSSD--------PETHIPPAPQLNQSTFIDASSDLSSAPSA

Query:  EPEP-------------TPIRRSTWACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPI-GCNWIYKIKTHSDGSIER--------------------
          +P             +  R +  A  +  W+QAM  E+ A    HTWD +  PP    I GC WI+  K +SDGS+ R                    
Subjt:  EPEP-------------TPIRRSTWACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPI-GCNWIYKIKTHSDGSIER--------------------

Query:  -------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPP--PQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFF
                     +L VA  + WP+ Q+D+ NAFL GTL++EV++  PP       P  VC LR+A+Y LKQAPRAW+    + +  +GF +S  D++ F
Subjt:  -------------LLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPDTTPP--PQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFF

Query:  TRQ-----------------------------------------------------------------------------------TTHDSNVRLTPFDG
          Q                                                                                   T   ++ +LT   G
Subjt:  TRQ-----------------------------------------------------------------------------------TTHDSNVRLTPFDG

Query:  VPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGDP--------------------------TDRRSTTGYCFYLGN
          L DPT YR +VGSL YL  TRP ++YAV+ ++Q+M  P   H+  + R+LRY+ G P                           D  ST GY  YLG+
Subjt:  VPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGDP--------------------------TDRRSTTGYCFYLGN

Query:  SLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
          IS  SKKQ  V RSSTE+EY ++A+T+SEL W+  LL ++G       +++CDN  A  +  N VFH R KHI  D
Subjt:  SLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

Arabidopsis top hitse value%identityAlignment
AT2G28660.1 Chloroplast-targeted copper chaperone protein5.3e-1968.66Show/hide
Query:  KMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS
        ++V LRVS+HCKGC  KV KHISKMEGV+SYTIDL TK V ++G I P  +VES+SKVK AQLW SS
Subjt:  KMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS

AT3G24450.1 Heavy metal transport/detoxification superfamily protein4.0e-2752.5Show/hide
Query:  SSYFANSIGIVMGKLKKMAKPLIATNNNKDNQLLTLKDVV--NGNQTLAFQLKPKMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDI
        S +  N++G    + +K  +PLI ++  K  +++ LKDVV  +  QTLAF LKPK+V L+VSMHC GCA+KVEKHISK++GV+ Y ++LE+K V++ G+I
Subjt:  SSYFANSIGIVMGKLKKMAKPLIATNNNKDNQLLTLKDVV--NGNQTLAFQLKPKMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDI

Query:  LPFEVVESVSKVKNAQLWQS
        LP +V+ES+ KVKNAQLW S
Subjt:  LPFEVVESVSKVKNAQLWQS

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.0e-6233.48Show/hide
Query:  LWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------------------LLAVAAAKQWPLLQMDMK
        +W  AM++E+ A+E THTW+   LPP KKPIGC W+YKIK +SDG+IER                                 +LA++A   + L Q+D+ 
Subjt:  LWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIER---------------------------------LLAVAAAKQWPLLQMDMK

Query:  NAFLNGTLSEEVHIKPPP------DTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTT----------------------
        NAFLNG L EE+++K PP        + PP  VC L++++Y LKQA R WF  FS T+   GF  S  D T+F + T                       
Subjt:  NAFLNGTLSEEVHIKPPP------DTTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTT----------------------

Query:  -------------------------------------------------------------HDSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIA
                                                                      D +V  +   G    D   YR+L+G L+YL +TR  I+
Subjt:  -------------------------------------------------------------HDSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIA

Query:  YAVHVVNQFMAAPRTIHFTVVLRILRYVKGD--------------------------PTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALAD
        +AV+ ++QF  APR  H   V++IL Y+KG                              RRST GYC +LG SLIS +SKKQ VVS+SS E+EY AL+ 
Subjt:  YAVHVVNQFMAAPRTIHFTVVLRILRYVKGD--------------------------PTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALAD

Query:  TTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND
         T E++WL     ++  P    T+L CDN +AI I  N VFHERTKHIE+D
Subjt:  TTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIEND

AT5G02600.2 Heavy metal transport/detoxification superfamily protein1.1e-1659.38Show/hide
Query:  KMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V LRVS+HCKGCA KV+KH+SK++GV+SY ID   K V + GD+ P  V+ S+SKVKNAQ W
Subjt:  KMVTLRVSMHCKGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

ATMG00810.1 DNA/RNA polymerases superfamily protein6.2e-2043.85Show/hide
Query:  DPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGD--------------------------PTDRRSTTGYCFYLGNSLIS
        DP+ +R +VG+L YLT+TRP I+YAV++V Q M  P    F ++ R+LRYVKG                            + RRSTTG+C +LG ++IS
Subjt:  DPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHFTVVLRILRYVKGD--------------------------PTDRRSTTGYCFYLGNSLIS

Query:  RRSKKQTVVSRSSTESEYCALADTTSELLW
          +K+Q  VSRSSTE+EY ALA T +EL W
Subjt:  RRSKKQTVVSRSSTESEYCALADTTSELLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTATGGGACGCAAAGTGGGAAGATTATTTGAGCTCACATCCTTTCAGCCACCCAACCTTCCATCTATTGCTGCTACTGCCATTGATACCAATCTATATCAATG
GCATCTTTGTCTTGGTCATGCATCATCGGAAAAACTTCGTACTTTAGTTTCTGTTGGTAATTTAAATCATGTCTCTAAATTTCACCCCTTTGATTGTTCGCATTGTAAAC
TTGCAAAACAACCTGCCTTATCATTTCCTATTTCTACATCATTATGTGATACACCATTTGGTCTAATTCATTTTGATATTTGGGGTCCTGCTCCTACGACTACAGTTCAT
GGTTATCGATACTTTGTTGTCCCGAAAAATTTTGAAGTTGCCCTCACATCTGTTTACGTCATCAATCGCCTTCCTTCCCCCGTTACCAATAATTTATCTCCTTTTGAACG
ACTATACGTTCTGAACATAAAGGCTATCGTTGTTGGGATCCCATCTCTCAACGTTTACTTAGCTCCCGTCATGTTACCTTCTAGGAACACTCACTCACCCCTTCTTCACC
AATCCTCCACTAATCTATTCCCCACTAATGACCCTTCATCTGACCCTGAAACTCACATCCCACCAGCCCCTCAGCTCAATCAATCTACTTTCATTGATGCGTCATCGGAT
TTGTCATCTGCTCCTAGTGCTGAACCTGAACCGACACCTATTCGCCGATCCACTTGGGCTTGTACTAACCCTTTGTGGCAGCAAGCAATGAATGAGGAACTTCAGGCATT
GGAAAAGACTCACACATGGGATTATATTGATCTACCCCCTGGCAAGAAACCCATTGGTTGTAACTGGATTTATAAAATCAAAACTCACTCTGATGGGTCTATTGAACGTC
TGTTAGCAGTAGCAGCTGCCAAACAATGGCCCCTTCTTCAGATGGATATGAAAAATGCATTTCTCAATGGCACTCTATCTGAAGAAGTACATATAAAGCCACCTCCTGAC
ACCACTCCACCTCCACAGAAAGTATGTCTTCTTCGTCGTGCTCTATACGAACTGAAACAAGCTCCACGAGCTTGGTTTGCAACTTTCAGCTCTACCATCACTCAACTTGG
ATTTACCTCCAGTTCGCATGACTCTACATTTTTTACTCGACAGACCACTCATGACTCGAATGTTCGTCTGACTCCCTTTGATGGTGTTCCTCTCGAAGACCCCACTTTGT
ATAGGCAACTTGTGGGCAGTTTAATCTACTTGACTGTTACTCGCCCAGGTATTGCTTATGCTGTCCATGTTGTTAATCAATTCATGGCAGCTCCTCGCACTATACATTTC
ACTGTTGTGCTTCGCATTTTACGATATGTCAAAGGAGATCCTACTGATCGTCGCTCCACCACCGGTTATTGCTTTTATTTAGGGAATTCTCTTATCTCTCGGCGTAGCAA
GAAACAAACTGTTGTTTCACGTTCTAGCACAGAATCTGAATATTGTGCACTTGCTGATACAACTTCGGAATTATTATGGCTTCGTTGGCTCCTTGCAGATATGGGGGCCC
CTCAACTCTCTGCTACCATTCTTCATTGTGACAATCGTAGTGCCATTCAGATAGATCATAATGATGTATTTCATGAACGAACAAAACACATTGAGAATGATATTGTCACT
TTATTCGCCATCATCTCCAAAGCTCCACTCTGCAATTATAGTCCATATCCACCACAGAACAACCAGCAGATGTTTTCGCCAAAATTCTCTCTCCTGCTCGCTTCATCCAG
TTACTTCGCAAACTCAATTGGGATTGTGATGGGGAAGCTGAAGAAAATGGCAAAGCCACTCATTGCCACCAACAATAACAAGGACAACCAATTGCTCACTTTGAAGGATG
TTGTCAATGGAAACCAGACCTTAGCCTTTCAACTCAAGCCCAAGATGGTGACACTGAGGGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACACATTTCA
AAGATGGAAGGAGTGAGCTCGTACACAATAGACTTGGAGACGAAGATGGTGATTATTATTGGAGACATTCTGCCGTTTGAAGTGGTGGAGAGCGTTTCTAAAGTCAAAAA
CGCACAGCTTTGGCAGTCTTCCCTAGCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTATGGGACGCAAAGTGGGAAGATTATTTGAGCTCACATCCTTTCAGCCACCCAACCTTCCATCTATTGCTGCTACTGCCATTGATACCAATCTATATCAATG
GCATCTTTGTCTTGGTCATGCATCATCGGAAAAACTTCGTACTTTAGTTTCTGTTGGTAATTTAAATCATGTCTCTAAATTTCACCCCTTTGATTGTTCGCATTGTAAAC
TTGCAAAACAACCTGCCTTATCATTTCCTATTTCTACATCATTATGTGATACACCATTTGGTCTAATTCATTTTGATATTTGGGGTCCTGCTCCTACGACTACAGTTCAT
GGTTATCGATACTTTGTTGTCCCGAAAAATTTTGAAGTTGCCCTCACATCTGTTTACGTCATCAATCGCCTTCCTTCCCCCGTTACCAATAATTTATCTCCTTTTGAACG
ACTATACGTTCTGAACATAAAGGCTATCGTTGTTGGGATCCCATCTCTCAACGTTTACTTAGCTCCCGTCATGTTACCTTCTAGGAACACTCACTCACCCCTTCTTCACC
AATCCTCCACTAATCTATTCCCCACTAATGACCCTTCATCTGACCCTGAAACTCACATCCCACCAGCCCCTCAGCTCAATCAATCTACTTTCATTGATGCGTCATCGGAT
TTGTCATCTGCTCCTAGTGCTGAACCTGAACCGACACCTATTCGCCGATCCACTTGGGCTTGTACTAACCCTTTGTGGCAGCAAGCAATGAATGAGGAACTTCAGGCATT
GGAAAAGACTCACACATGGGATTATATTGATCTACCCCCTGGCAAGAAACCCATTGGTTGTAACTGGATTTATAAAATCAAAACTCACTCTGATGGGTCTATTGAACGTC
TGTTAGCAGTAGCAGCTGCCAAACAATGGCCCCTTCTTCAGATGGATATGAAAAATGCATTTCTCAATGGCACTCTATCTGAAGAAGTACATATAAAGCCACCTCCTGAC
ACCACTCCACCTCCACAGAAAGTATGTCTTCTTCGTCGTGCTCTATACGAACTGAAACAAGCTCCACGAGCTTGGTTTGCAACTTTCAGCTCTACCATCACTCAACTTGG
ATTTACCTCCAGTTCGCATGACTCTACATTTTTTACTCGACAGACCACTCATGACTCGAATGTTCGTCTGACTCCCTTTGATGGTGTTCCTCTCGAAGACCCCACTTTGT
ATAGGCAACTTGTGGGCAGTTTAATCTACTTGACTGTTACTCGCCCAGGTATTGCTTATGCTGTCCATGTTGTTAATCAATTCATGGCAGCTCCTCGCACTATACATTTC
ACTGTTGTGCTTCGCATTTTACGATATGTCAAAGGAGATCCTACTGATCGTCGCTCCACCACCGGTTATTGCTTTTATTTAGGGAATTCTCTTATCTCTCGGCGTAGCAA
GAAACAAACTGTTGTTTCACGTTCTAGCACAGAATCTGAATATTGTGCACTTGCTGATACAACTTCGGAATTATTATGGCTTCGTTGGCTCCTTGCAGATATGGGGGCCC
CTCAACTCTCTGCTACCATTCTTCATTGTGACAATCGTAGTGCCATTCAGATAGATCATAATGATGTATTTCATGAACGAACAAAACACATTGAGAATGATATTGTCACT
TTATTCGCCATCATCTCCAAAGCTCCACTCTGCAATTATAGTCCATATCCACCACAGAACAACCAGCAGATGTTTTCGCCAAAATTCTCTCTCCTGCTCGCTTCATCCAG
TTACTTCGCAAACTCAATTGGGATTGTGATGGGGAAGCTGAAGAAAATGGCAAAGCCACTCATTGCCACCAACAATAACAAGGACAACCAATTGCTCACTTTGAAGGATG
TTGTCAATGGAAACCAGACCTTAGCCTTTCAACTCAAGCCCAAGATGGTGACACTGAGGGTGTCCATGCACTGTAAAGGCTGTGCAAGAAAAGTGGAGAAACACATTTCA
AAGATGGAAGGAGTGAGCTCGTACACAATAGACTTGGAGACGAAGATGGTGATTATTATTGGAGACATTCTGCCGTTTGAAGTGGTGGAGAGCGTTTCTAAAGTCAAAAA
CGCACAGCTTTGGCAGTCTTCCCTAGCTTCATAA
Protein sequenceShow/hide protein sequence
MIGMGRKVGRLFELTSFQPPNLPSIAATAIDTNLYQWHLCLGHASSEKLRTLVSVGNLNHVSKFHPFDCSHCKLAKQPALSFPISTSLCDTPFGLIHFDIWGPAPTTTVH
GYRYFVVPKNFEVALTSVYVINRLPSPVTNNLSPFERLYVLNIKAIVVGIPSLNVYLAPVMLPSRNTHSPLLHQSSTNLFPTNDPSSDPETHIPPAPQLNQSTFIDASSD
LSSAPSAEPEPTPIRRSTWACTNPLWQQAMNEELQALEKTHTWDYIDLPPGKKPIGCNWIYKIKTHSDGSIERLLAVAAAKQWPLLQMDMKNAFLNGTLSEEVHIKPPPD
TTPPPQKVCLLRRALYELKQAPRAWFATFSSTITQLGFTSSSHDSTFFTRQTTHDSNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPGIAYAVHVVNQFMAAPRTIHF
TVVLRILRYVKGDPTDRRSTTGYCFYLGNSLISRRSKKQTVVSRSSTESEYCALADTTSELLWLRWLLADMGAPQLSATILHCDNRSAIQIDHNDVFHERTKHIENDIVT
LFAIISKAPLCNYSPYPPQNNQQMFSPKFSLLLASSSYFANSIGIVMGKLKKMAKPLIATNNNKDNQLLTLKDVVNGNQTLAFQLKPKMVTLRVSMHCKGCARKVEKHIS
KMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLAS