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ClCG06G011850 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G011850
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr06:24947934..24950178
RNA-Seq ExpressionClCG06G011850
SyntenyClCG06G011850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050069.1 hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa]6.1e-2569.32Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+ DVIKFPIAPHP CCKAI KLNDCAPEI++KIP  DMDVIKKIC+L
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

KAA0050072.1 hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa]3.6e-2567.82Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICA
        A+LA   TA     +     S+SQNLSF SCAPFI D TLC+VDV KFPI+PHP CCKAIFKLNDCAP +F+ IPP DMDVIKKICA
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICA

KAE8653020.1 hypothetical protein Csa_004576, partial [Cucumis sativus]5.7e-2371.95Show/hide
Query:  AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDV
        A+LA  ATA RTV  +     SISQ+LSF SC PFILDATLC+VDV KFPIAPHPFCCKAIFKLNDCAP +F+ IP  DMDV
Subjt:  AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDV

KAE8653023.1 hypothetical protein Csa_023561, partial [Cucumis sativus]3.2e-2671.91Show/hide
Query:  AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        A+LA  ATA RTV  +     SISQ+LSF SC PFILDATLC+VDV KFPIAPHPFCCKAIFKLNDCAP +F+ IP  DMDV+K ICAL
Subjt:  AVLARPATA-RTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

TYK10334.1 hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]6.3e-2263.64Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+  VIKFPIAPHP CCKAI KL DCAP+I++KIP  DM+VIKK C+L
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

TrEMBL top hitse value%identityAlignment
A0A5A7U2L3 Uncharacterized protein1.7e-2567.82Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICA
        A+LA   TA     +     S+SQNLSF SCAPFI D TLC+VDV KFPI+PHP CCKAIFKLNDCAP +F+ IPP DMDVIKKICA
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICA

A0A5A7U475 Uncharacterized protein1.3e-2063.64Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        A+LA  ATA TVA A  PS    ++LSF +C PFILDAT+C+V VIKFP+APHP CCKAI  LNDC+PE+++ IP   MDVIKKIC+L
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

A0A5A7U9A1 Uncharacterized protein3.0e-2569.32Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+ DVIKFPIAPHP CCKAI KLNDCAPEI++KIP  DMDVIKKIC+L
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

A0A5D3CGK9 Uncharacterized protein3.1e-2263.64Show/hide
Query:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        A+LA P+T      A  PS S+ QN  FL CAPFIL+ATLC+  VIKFPIAPHP CCKAI KL DCAP+I++KIP  DM+VIKK C+L
Subjt:  AVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

A0A5D3CGL7 Uncharacterized protein2.4e-1962.5Show/hide
Query:  VLARPATARTVAVAVEP-SSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL
        +LA   TA T+A A  P    + Q+ SF +CAPFIL+AT+CMVDVIK P+APHP CCKAI  LNDCAPEI++ IP   MDVIKKIC L
Subjt:  VLARPATARTVAVAVEP-SSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPHPFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAA
TTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAG
AACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCAT
CCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCACCATCAAGGAGGCCTGGAATGAAGAAGAGAGAGCATGGAATCCTACCTTTCGCAGAATTCTTCTCCCTCGAAAGATGGAAGACCGGGCACACTTGACAACCAA
TTGGTCGACTCTTCGAGAAAACAATAGGGACGACTTAACCAGATGGACGCTTAATCCTGAAGCCGTTTTAGCACGACCGGCGACAGCCCGCACGGTGGCAGTGGCGGTAG
AACCCAGTTCATCAATATCACAAAATCTCTCTTTCTTAAGTTGTGCTCCATTTATCCTGGATGCGACATTGTGTATGGTCGATGTGATCAAGTTTCCAATTGCTCCTCAT
CCTTTTTGTTGCAAAGCCATTTTTAAGCTCAATGACTGTGCTCCTGAAATTTTCGAAAAGATTCCCCCGGTTGACATGGATGTTATTAAGAAGATTTGTGCTTTGTAA
Protein sequenceShow/hide protein sequence
MITIKEAWNEEERAWNPTFRRILLPRKMEDRAHLTTNWSTLRENNRDDLTRWTLNPEAVLARPATARTVAVAVEPSSSISQNLSFLSCAPFILDATLCMVDVIKFPIAPH
PFCCKAIFKLNDCAPEIFEKIPPVDMDVIKKICAL