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ClCG06G012500 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G012500
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUPF0057 membrane protein
Genome locationCG_Chr06:25670938..25673758
RNA-Seq ExpressionClCG06G012500
SyntenyClCG06G012500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146673.1 UPF0057 membrane protein At4g30660 [Cucumis sativus]6.4e-3496Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGY+PGIIYALYAIVFIDR+EYFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

XP_008443846.1 PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]1.7e-3497.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGY+PGIIYALYAIVFIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

XP_018828305.1 UPF0057 membrane protein At4g30660-like [Juglans regia]1.9e-3393.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAIL+PPLGVC RHGCC+VEFCICLLLTILGYIPGIIYALYAIVF+DRD+YFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

XP_021814013.1 UPF0057 membrane protein At4g30660-like [Prunus avium]4.1e-3394.52Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA
        MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT+LGYIPGIIYALYAIVF+DRDEYFDEYRRPLYA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA

XP_038879686.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]5.8e-3598.67Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGY+PGIIYALYAIVFIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

TrEMBL top hitse value%identityAlignment
A0A0A0LTR2 Uncharacterized protein3.1e-3496Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGY+PGIIYALYAIVFIDR+EYFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

A0A1S3B9R0 UPF0057 membrane protein At4g306608.1e-3597.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLT LGY+PGIIYALYAIVFIDRDEYFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

A0A2I4F9J0 UPF0057 membrane protein At4g30660-like9.0e-3493.33Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA
        MPSRCEIFCEILIAIL+PPLGVC RHGCC+VEFCICLLLTILGYIPGIIYALYAIVF+DRD+YFDEYRRPLYAPA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA

A0A6J5VL24 Uncharacterized protein2.6e-3393.15Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA
        MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT+LGY+PGIIYALYAIVF+DRDEYFDEYRRPLYA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA

A0A6P5SJT5 UPF0057 membrane protein At4g30660-like2.0e-3394.52Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA
        MPSRCEIFCEILIA+LIPPLGVCLRHGCCT+EFCICLLLT+LGYIPGIIYALYAIVF+DRDEYFDEYRRPLYA
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA

SwissProt top hitse value%identityAlignment
O82232 UPF0057 membrane protein At2g240409.3e-2877.78Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLY
        M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ RDEYFDEYRRP+Y
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLY

Q9LRI7 Hydrophobic protein OSR87.9e-1968.75Show/hide
Query:  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEY
        RC  F EIL+AI++PPLGV LR GCC++EFCICLLLTILGY+PGIIYA+Y +V +D D+Y  EY
Subjt:  RCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEY

Q9M095 UPF0057 membrane protein At4g306501.4e-2078.69Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRD
        M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LTILGYIPGIIYALY IVF +R+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRD

Q9SUI0 UPF0057 membrane protein At4g306602.4e-2878.08Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA
        MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGY+PGIIYA+Y IVF  R+EYFDEYRRP+Y+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA

Q9ZNQ7 Hydrophobic protein RCI2A3.0e-1070.83Show/hide
Query:  FCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAI
        F +I+IAIL+PPLGV LR G C VEF ICL+LT+LGYIPGIIYA+Y +
Subjt:  FCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAI

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family6.6e-2977.78Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLY
        M S CE+ CEI IAIL+PP+GVCLRHGCCTVEF ICL+LT LGY+PGIIYA+YAI F+ RDEYFDEYRRP+Y
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLY

AT4G28088.1 Low temperature and salt responsive protein family5.9e-3079.17Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLY
        M + CEI CEI+IAILIPPLGVCLRHGCCT EF ICL+LT+LGY+PGIIYALYAIV++DRD++FDEYRRPL+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family1.0e-2178.69Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRD
        M S  E+FCEILIAIL+PPLGVCL+ GCCTVEF ICL+LTILGYIPGIIYALY IVF +R+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRD

AT4G30660.1 Low temperature and salt responsive protein family1.7e-2978.08Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA
        MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGY+PGIIYA+Y IVF  R+EYFDEYRRP+Y+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA

AT4G30660.2 Low temperature and salt responsive protein family1.7e-2978.08Show/hide
Query:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA
        MPS CEI CEI+IAIL+PPLGVC R GCCTVEF ICL+LTILGY+PGIIYA+Y IVF  R+EYFDEYRRP+Y+
Subjt:  MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTCGCTGTGAGATCTTCTGCGAGATTCTCATTGCTATTTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCATGGATGTTGCACCGTTGAGTTTTGCATATGCCT
TCTTTTGACGATACTTGGTTATATTCCTGGAATTATCTATGCTTTGTATGCCATAGTTTTCATTGATCGCGATGAGTATTTCGATGAATACAGGCGTCCTCTTTATGCGC
CGGCCTAG
mRNA sequenceShow/hide mRNA sequence
AAGCCGCGCCAAGAACCGGAGTCCACAGGCACTATTTATGGTCGTCTTCAACTTCGTTATTATTTATCTTCTTTTTCCTTTTAATTTCTTTCCCCATTCTGGATCTGTCG
TTACCTACCATCGTCTTCCTCTTCTCTTTCATCTTGTTTTTCTTCTCTCTTTTCTGACTTCTTCAGACGCCATTAAAACATGCCATCTCGCTGTGAGATCTTCTGCGAGA
TTCTCATTGCTATTTTGATTCCTCCTTTGGGCGTCTGCCTCAGGCATGGATGTTGCACCGTTGAGTTTTGCATATGCCTTCTTTTGACGATACTTGGTTATATTCCTGGA
ATTATCTATGCTTTGTATGCCATAGTTTTCATTGATCGCGATGAGTATTTCGATGAATACAGGCGTCCTCTTTATGCGCCGGCCTAGATTCTTTAGATAGGCAAAATGGA
AGGAGATAGAGGCAAAGAAGGGAGATGAGGAACAAAATCAAAAGTCCTTTCCTCATTTAGATTAATCTTGATGTTGAAATTCAATCTTGTACGATAAATGGAGGGTTGAG
CCTGCCTGTTTTTAAACCACTAAAAAGAAACAACAGTGGCCCCTATAAAGTGTATGGGTTATAGAGACATATAGATTGGAATATATACTCACAAATCATGTTATTTAATT
CAGAAAAGAATTTAAAACTTACTTCTTAGATAAATTGAACGTGTGGCTTAAAATGGACTCCCTTTTGTAATTCC
Protein sequenceShow/hide protein sequence
MPSRCEIFCEILIAILIPPLGVCLRHGCCTVEFCICLLLTILGYIPGIIYALYAIVFIDRDEYFDEYRRPLYAPA