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ClCG06G012790 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G012790
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionglycine-rich cell wall structural protein-like
Genome locationCG_Chr06:25984103..25984507
RNA-Seq ExpressionClCG06G012790
SyntenyClCG06G012790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443814.1 PREDICTED: glycine-rich protein DOT1-like [Cucumis melo]2.0e-3888.24Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGA--GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS
        M SIKAI VLCLVLCMSVIES+AGRVARK+LGLDLGG+GVGLGLGLGLG+GGGSGSGAGA  GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGA--GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        YAGSRAGSG+ R N   GGE HGYGEG GYGEGGNN
Subjt:  YAGSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN

XP_011656027.1 glycine-rich protein DOT1 [Cucumis sativus]8.7e-4291.79Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
        M SIKAI+VLCLVLCMSVIES+AGRVARKDLGLDLGG+GVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA

Query:  GSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        GSRAGSG+G  N   GGEGHGYGEG GYGEGGNN
Subjt:  GSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN

XP_022921885.1 glycine-rich protein DOT1-like [Cucurbita moschata]1.4e-3181.29Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSS--SSSHSSSSSYGGSGAGSEAGSYAGS
        M SI+AI+VLC V+CMS IESQ GRVARKDLGLDLGG+GVGLG+GLGLGLGGGSGSG+G+GSGSGSGSGS S   SSS SSSSSYGGSGAGSEAGSYAGS
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSS--SSSHSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRAGSGAGRGNRGGG---GEGHGYGEGRGYGEGGNN
        YAGSR GS +GR  R GG   GEG GYGEGRGYGEGGNN
Subjt:  YAGSRAGSGAGRGNRGGG---GEGHGYGEGRGYGEGGNN

XP_023515820.1 putative glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]1.5e-3077.86Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
        M SI++I+VLC V+CMS IESQ GRVARKDLGLDLGG+GVGLG+GLGLGLGGGSGSG+G+GSGSGSGSGSY  SSS SSSSSYGGSGAGSEAGSYAGSYA
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA

Query:  GSRAGS---------GAGRGNRGGGGEGHGYGEGRGYGEG
        GSR GS         G+G G  GGGG G GYGEGRGYGEG
Subjt:  GSRAGS---------GAGRGNRGGGGEGHGYGEGRGYGEG

XP_038880102.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]1.2e-4394.03Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
        M +IKAI+VLCLVLCMSVIES AGRVARKDLGLDLGG+GVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA

Query:  GSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        GSRAGSG+GRGN  GGGEGHGYGEGRGYGEGGNN
Subjt:  GSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN

TrEMBL top hitse value%identityAlignment
A0A0A0LW94 Uncharacterized protein4.2e-4291.79Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
        M SIKAI+VLCLVLCMSVIES+AGRVARKDLGLDLGG+GVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA

Query:  GSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        GSRAGSG+G  N   GGEGHGYGEG GYGEGGNN
Subjt:  GSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN

A0A1S3B9P9 glycine-rich protein DOT1-like9.7e-3988.24Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGA--GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS
        M SIKAI VLCLVLCMSVIES+AGRVARK+LGLDLGG+GVGLGLGLGLG+GGGSGSGAGA  GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGA--GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        YAGSRAGSG+ R N   GGE HGYGEG GYGEGGNN
Subjt:  YAGSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN

A0A5A7SV53 Glycine-rich protein DOT1-like9.7e-3988.24Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGA--GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS
        M SIKAI VLCLVLCMSVIES+AGRVARK+LGLDLGG+GVGLGLGLGLG+GGGSGSGAGA  GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGA--GSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        YAGSRAGSG+ R N   GGE HGYGEG GYGEGGNN
Subjt:  YAGSRAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN

A0A6J1C269 glycine-rich cell wall structural protein 2-like2.8e-3073.03Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
        M SI+AI+ +C V+C   IESQA RVARKDLGLDLGG+G+GLG G+GLG+GGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGS A
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA

Query:  GSRAGS-----------------GAGRGNRGGGGEGHGYGEGRGY-GEGGNN
        GS +GS                 G+GRGN  G GEGHGYGEGRGY GEGGNN
Subjt:  GSRAGS-----------------GAGRGNRGGGGEGHGYGEGRGY-GEGGNN

A0A6J1E720 glycine-rich protein DOT1-like6.7e-3281.29Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSS--SSSHSSSSSYGGSGAGSEAGSYAGS
        M SI+AI+VLC V+CMS IESQ GRVARKDLGLDLGG+GVGLG+GLGLGLGGGSGSG+G+GSGSGSGSGS S   SSS SSSSSYGGSGAGSEAGSYAGS
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSS--SSSHSSSSSYGGSGAGSEAGSYAGS

Query:  YAGSRAGSGAGRGNRGGG---GEGHGYGEGRGYGEGGNN
        YAGSR GS +GR  R GG   GEG GYGEGRGYGEGGNN
Subjt:  YAGSRAGSGAGRGNRGGG---GEGHGYGEGRGYGEGGNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein3.2e-1866.06Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA
        M   + + +L LV+  S++     R+ARKDLG+DLGG+G+GLG+GLG+GLGGGSGSGAGAGSGSGSGS S SSSSS SSSSS   SG+G  AGS AGS+A
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYA

Query:  GSRAGSGAG
        GSRAGSG+G
Subjt:  GSRAGSGAG

AT4G30460.1 glycine-rich protein1.9e-1862.14Show/hide
Query:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSG--AGSEAGSYAGS
        + +  ++ ++ L+L  SV+ S++ RVARKDLGLDLGG+G G+G+G+G+G GGGSGSGAGAGSGSG G  S SSSSS SSSSS GG G  AGSEAGSYAGS
Subjt:  MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSG--AGSEAGSYAGS

Query:  YAGS----RAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN
        +AGS    R+GSG GRG+ GGGG G G G G G G GG +
Subjt:  YAGS----RAGSGAGRGNRGGGGEGHGYGEGRGYGEGGNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCCATCAAAGCTATTTCTGTTCTTTGTTTAGTACTGTGTATGTCTGTGATTGAATCACAAGCGGGGCGTGTGGCCAGGAAGGACCTAGGCCTTGATCTT
GGTGGAGTGGGAGTTGGCCTTGGCCTTGGCTTAGGCTTGGGCTTAGGCGGTGGAAGTGGGTCGGGTGCTGGAGCCGGGTCTGGATCCGGATCCGGGTCTGGTTCA
TATTCGTCATCGTCGTCACACTCATCAAGCTCTAGCTATGGAGGCTCCGGTGCAGGCTCTGAAGCTGGTTCGTACGCTGGGTCTTATGCAGGGTCACGTGCTGGC
TCAGGAGCCGGGAGAGGAAACCGCGGCGGCGGTGGAGAGGGCCATGGCTACGGCGAGGGACGTGGTTACGGTGAAGGTGGCAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCCATCAAAGCTATTTCTGTTCTTTGTTTAGTACTGTGTATGTCTGTGATTGAATCACAAGCGGGGCGTGTGGCCAGGAAGGACCTAGGCCTTGATCTT
GGTGGAGTGGGAGTTGGCCTTGGCCTTGGCTTAGGCTTGGGCTTAGGCGGTGGAAGTGGGTCGGGTGCTGGAGCCGGGTCTGGATCCGGATCCGGGTCTGGTTCA
TATTCGTCATCGTCGTCACACTCATCAAGCTCTAGCTATGGAGGCTCCGGTGCAGGCTCTGAAGCTGGTTCGTACGCTGGGTCTTATGCAGGGTCACGTGCTGGC
TCAGGAGCCGGGAGAGGAAACCGCGGCGGCGGTGGAGAGGGCCATGGCTACGGCGAGGGACGTGGTTACGGTGAAGGTGGCAACAACTAA
Protein sequenceShow/hide protein sequence
MGSIKAISVLCLVLCMSVIESQAGRVARKDLGLDLGGVGVGLGLGLGLGLGGGSGSGAGAGSGSGSGSGSYSSSSSHSSSSSYGGSGAGSEAGSYAGSYAGSRAG
SGAGRGNRGGGGEGHGYGEGRGYGEGGNN