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ClCG06G012810 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G012810
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationCG_Chr06:26009257..26009700
RNA-Seq ExpressionClCG06G012810
SyntenyClCG06G012810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443812.1 PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo]3.9e-3583.67Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG
        MASIR   +  FLLGVSVIVSESRVAR DLGLDLGG+GLGVGTGVGLGL GSGSG GSG G  SSS SSS SSSSSSGSDAGSEAGSYAGSYAGSRAGSG
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG

Query:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN
        SGRNRNGGSGSGSG+G        GGEGYGEGHGYGEGHGYGNGGEN
Subjt:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN

XP_022135238.1 putative glycine-rich cell wall structural protein 1 [Momordica charantia]2.2e-3077.03Show/hide
Query:  MASIRAFTIAAFLLGVS-VIVSESRVARMDLGLDLGGVGLGVGTGVGLGLG---GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSR
        MA+IR F + AF+LG+S  IVSE+RVAR DLG+DLGGVG+G+G G+GLG G   GSG+G+GSGSGS SSS SSS SSSSSSGS AGSEAGSYAGSYAGSR
Subjt:  MASIRAFTIAAFLLGVS-VIVSESRVARMDLGLDLGGVGLGVGTGVGLGLG---GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG
        AGSGSG NR    GSGSGSGYG GSGRG GEGYGEGHGYGEGHGYG G
Subjt:  AGSGSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG

XP_022921884.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]3.1e-3280.27Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG
        MASIRA +I A LL +SVIVSESRVARMDLGLDLGGVG+G+GTGVGLGLGGSGSGSGSGSGS S S SSS+SSS SS S +GS+AGS AGSYAGS AGSG
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG

Query:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN
        SGRNRNGGSGSGSGSG G G+G G G G G G GYGEGHGYGN GEN
Subjt:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN

XP_023515818.1 putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo]1.1e-3275.31Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSY------------
        MASIRA +I A LL +SVIVSESR+ARMDLGLDLGGVG+G+GTGVGLGLGGSGSGSGSGS SASSSHSSSSSS S +GS+AGS AGSY            
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSY------------

Query:  ----AGSYAGSRAGSGSGRNRNGGSGSGS--GSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG
            AGSYAGSRAGS SGRNRNGGSGSGS  G G G GSG GGGEGYGEGHGYGEG GYG G
Subjt:  ----AGSYAGSRAGSGSGRNRNGGSGSGS--GSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG

XP_038879815.1 putative per-hexamer repeat protein 5 [Benincasa hispida]4.6e-4492.05Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLG----GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSR
        MASIRA TI AFLLGVSVIVSE RVARM+LGLDLGGVGLGVGTGVGLGLG    GSGSGSGSGSGS SSS SSS SSSSSSGSDAGSEAGSYAGSYAGSR
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLG----GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN
        AGSGSGRNRNGGSGSGSGSGYGAGSGRG GEGYGEGHGYGEGHGYGNGGEN
Subjt:  AGSGSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN

TrEMBL top hitse value%identityAlignment
A0A0A0LTK9 Uncharacterized protein2.9e-2874.68Show/hide
Query:  MASIRAFTI-AAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSS----SSSSSSGSDAGSEAGSYAGSYAGS
        MASI++  I    LL  S I+SE RVAR DLG+DLGGVG+G+GTG+GLG+GGSGSGSGSGSGS S S SSSS    SSSSSSGS AGSEAGSYAGSYAGS
Subjt:  MASIRAFTI-AAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSS----SSSSSSGSDAGSEAGSYAGSYAGS

Query:  RAGSGSGRNRNGGSGSGSGSGYGAGSGRGG-----GEGYGEGHGYGEGHGYGNG
        RAGSGSG NRNG  GSG GSGYG GSGRGG     GEGYGEGHGYGEG GYG G
Subjt:  RAGSGSGRNRNGGSGSGSGSGYGAGSGRGG-----GEGYGEGHGYGEGHGYGNG

A0A1S3B8Y8 putative glycine-rich cell wall structural protein 11.9e-3583.67Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG
        MASIR   +  FLLGVSVIVSESRVAR DLGLDLGG+GLGVGTGVGLGL GSGSG GSG G  SSS SSS SSSSSSGSDAGSEAGSYAGSYAGSRAGSG
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG

Query:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN
        SGRNRNGGSGSGSG+G        GGEGYGEGHGYGEGHGYGNGGEN
Subjt:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN

A0A6J1C497 putative glycine-rich cell wall structural protein 11.1e-3077.03Show/hide
Query:  MASIRAFTIAAFLLGVS-VIVSESRVARMDLGLDLGGVGLGVGTGVGLGLG---GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSR
        MA+IR F + AF+LG+S  IVSE+RVAR DLG+DLGGVG+G+G G+GLG G   GSG+G+GSGSGS SSS SSS SSSSSSGS AGSEAGSYAGSYAGSR
Subjt:  MASIRAFTIAAFLLGVS-VIVSESRVARMDLGLDLGGVGLGVGTGVGLGLG---GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSR

Query:  AGSGSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG
        AGSGSG NR    GSGSGSGYG GSGRG GEGYGEGHGYGEGHGYG G
Subjt:  AGSGSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG

A0A6J1E1T0 glycine-rich cell wall structural protein 2-like1.5e-3280.27Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG
        MASIRA +I A LL +SVIVSESRVARMDLGLDLGGVG+G+GTGVGLGLGGSGSGSGSGSGS S S SSS+SSS SS S +GS+AGS AGSYAGS AGSG
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSG

Query:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN
        SGRNRNGGSGSGSGSG G G+G G G G G G GYGEGHGYGN GEN
Subjt:  SGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN

A0A6J1E521 putative glycine-rich cell wall structural protein 1 isoform X37.6e-2975.68Show/hide
Query:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSS--SSGSDAGSEAGSYAGSYAGSRAG
        MASI +  +  FLL  SVI+S++RVAR DLGLDLGG+G+G+GTG+GLGLGGSGSGSGSGSGS S S SSSSSSSS  SS S +GS AGS AGSYAGSRAG
Subjt:  MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSS--SSGSDAGSEAGSYAGSYAGSRAG

Query:  SGSGRNRNGGSGSGS--GSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG
        SGSG NRNGGSGSGS  G G G GSG GGGEGYGEGHGYGEG GYG G
Subjt:  SGSGRNRNGGSGSGS--GSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein8.1e-1566.67Show/hide
Query:  FLLGVSVI-----VSESRVARMDLGLDLGGVGLGVGTGVGLGLG---GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG
        FLLG+ VI     ++ESR+AR DLG+DLGG+G+G+G G+G+GLG   GSG+G+GSGSGS S S SSSSSSSSSS S +G  AGS AGS+AGSRAGSGSG
Subjt:  FLLGVSVI-----VSESRVARMDLGLDLGGVGLGVGTGVGLGLG---GSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG

AT4G30460.1 glycine-rich protein4.0e-2266.21Show/hide
Query:  IAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGS----ASSSHSSSSSSSSSS---GSDAGSEAGSYAGSYAGSRAG--S
        +   +L  SV+VSESRVAR DLGLDLGG+G G+G G+G+G GGSGSG+G+GSGS    +SSS SSSSSSSSSS   G DAGSEAGSYAGS+AGS +G  S
Subjt:  IAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGS----ASSSHSSSSSSSSSS---GSDAGSEAGSYAGSYAGSRAG--S

Query:  GSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG
        GSGR R  G G G G G G G GRGGG G G G GYGEG GYG G
Subjt:  GSGRNRNGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCAGGGCCTTTACCATTGCCGCTTTCCTACTTGGTGTGTCCGTCATTGTATCAGAAAGCCGTGTTGCCAGGATGGACTTGGGCCTCGACCTTGGA
GGAGTGGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGCTTAGGTGGAAGTGGCTCTGGCTCCGGCTCCGGCTCCGGTTCTGCTTCCTCATCACACTCCTCAAGC
TCCAGCTCCAGCTCCAGCTCCGGCTCCGACGCTGGGTCGGAAGCCGGTTCGTACGCTGGGTCTTATGCCGGGTCTCGGGCTGGATCCGGTTCGGGTAGGAACAGA
AACGGTGGTTCCGGTTCTGGTTCCGGTTCAGGTTATGGTGCGGGTTCTGGGAGGGGTGGCGGTGAAGGATATGGAGAAGGCCATGGATACGGCGAGGGGCATGGT
TATGGCAATGGCGGCGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATCAGGGCCTTTACCATTGCCGCTTTCCTACTTGGTGTGTCCGTCATTGTATCAGAAAGCCGTGTTGCCAGGATGGACTTGGGCCTCGACCTTGGA
GGAGTGGGCCTCGGTGTTGGCACGGGAGTGGGCTTGGGCTTAGGTGGAAGTGGCTCTGGCTCCGGCTCCGGCTCCGGTTCTGCTTCCTCATCACACTCCTCAAGC
TCCAGCTCCAGCTCCAGCTCCGGCTCCGACGCTGGGTCGGAAGCCGGTTCGTACGCTGGGTCTTATGCCGGGTCTCGGGCTGGATCCGGTTCGGGTAGGAACAGA
AACGGTGGTTCCGGTTCTGGTTCCGGTTCAGGTTATGGTGCGGGTTCTGGGAGGGGTGGCGGTGAAGGATATGGAGAAGGCCATGGATACGGCGAGGGGCATGGT
TATGGCAATGGCGGCGAAAACTGA
Protein sequenceShow/hide protein sequence
MASIRAFTIAAFLLGVSVIVSESRVARMDLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGSGSASSSHSSSSSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNR
NGGSGSGSGSGYGAGSGRGGGEGYGEGHGYGEGHGYGNGGEN