; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G012890 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G012890
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptiontranscription factor IBH1-like 1
Genome locationCG_Chr06:26137234..26140208
RNA-Seq ExpressionClCG06G012890
SyntenyClCG06G012890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149880.1 transcription factor IBH1-like 1 [Cucumis sativus]5.9e-7383.24Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        M+N +SLK+EF KKWMMGLQIYTT+NENMTVTERKTAIKLSADIALASSRNCATRWSRAVIA +SVDNRS  VA+G+LGR +CERVKQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS
        SGKI+KRSRRV RRR +  K +AA ++A+RLVQKRTKVLRGLVPGGEFMDEISL EETLDY+SALQAQVDVMR L TAYNPSSSS
Subjt:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS

XP_008443801.1 PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo]2.0e-7383.24Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        M+NP+SLK+EFLKKWMMGLQIYTT+NENMTV ERKTAIKLSADIALASSRNCATRWSRAVIA +SVDNRS LVA+G+LGR +CERVKQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS
        SGKI+KRSRRV RRR +  K +AA ++A+RLVQ+RTKVLRGLVPGGEFMDEISL EETLDY+SALQAQVDVMR L +AYNPSSSS
Subjt:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS

XP_022988593.1 transcription factor IBH1-like 1 [Cucurbita maxima]6.3e-6781.82Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        MRNPSSLKR+FLKKW+MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA  SV + S LVA+GLLGRAVCER+KQ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET
        SGKILKRSRRV RR KC+K  AAE +A+RLVQKRT+ LRGLVPGGEFMDE+SL EETLDYI ALQ QVDVMRCL T
Subjt:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET

XP_023515816.1 transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo]7.7e-6578.98Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        M NP+SLKR+FLKKW+MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA  SV + S LVA+G+LGRAVCER+K+ S+SKITRSSW 
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET
        SGKILKRSRRV RR KC+K   AE +AKRLVQKRT++LRGLVPGGEFMDE+SL EETLDYI ALQ QVDVMRCL T
Subjt:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET

XP_038879866.1 transcription factor IBH1-like 1 [Benincasa hispida]1.0e-8091.94Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTT-SNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSW
        MRNPSSLKREFLKKWM GLQIYTT SNENMTV ERKTAIKLSADIALASSRNCATRWSRAVIAS+SVDNRSR VADG+LGRAVCERVKQISNSK+TRSSW
Subjt:  MRNPSSLKREFLKKWMMGLQIYTT-SNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSW

Query:  SSGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS
        SSG ILKRSRRV RRRNKC K +AAESVAKRLV KRTKVLRGLVPGGEFMDEISL EETLDYISALQAQVDVMRCL TAYNPSSSS
Subjt:  SSGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ3 Uncharacterized protein2.9e-7383.24Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        M+N +SLK+EF KKWMMGLQIYTT+NENMTVTERKTAIKLSADIALASSRNCATRWSRAVIA +SVDNRS  VA+G+LGR +CERVKQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS
        SGKI+KRSRRV RRR +  K +AA ++A+RLVQKRTKVLRGLVPGGEFMDEISL EETLDY+SALQAQVDVMR L TAYNPSSSS
Subjt:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS

A0A1S3B8V1 uncharacterized protein LOC1034873059.8e-7483.24Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        M+NP+SLK+EFLKKWMMGLQIYTT+NENMTV ERKTAIKLSADIALASSRNCATRWSRAVIA +SVDNRS LVA+G+LGR +CERVKQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS
        SGKI+KRSRRV RRR +  K +AA ++A+RLVQ+RTKVLRGLVPGGEFMDEISL EETLDY+SALQAQVDVMR L +AYNPSSSS
Subjt:  SGKILKRSRRV-RRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSSSS

A0A6J1E715 transcription factor IBH1-like 18.3e-6580.11Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        MRNPS LKR+FLKKW MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA  SV + S LVA+G+LGRAVCER+K+ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET
        S KILKRSRRV RR KC+K  AAE +AKRLVQKRT+ LRGLVPGGEFMDE+SL EETLDYI ALQ QVDVMRCL T
Subjt:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET

A0A6J1HUQ3 transcription factor IBH1-like 12.4e-6474.13Show/hide
Query:  TIFFILSLLLLYHTFPRMRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVC
        ++F  LS+L     F RMRNPS LKREFLKKWMMGL+IYTTSN+NMTVT+RK AIKLSADIALASSRNCATRWS+A+IA+ SVD+ SRLVAD LLGR   
Subjt:  TIFFILSLLLLYHTFPRMRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVC

Query:  ERVKQISNSKITRSSWSSGKILKRSRRVRR-RNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSS
              +N KITR  WSS KI+KRSRRV+R R KCKK  AAE +AK L +KR KVLRGLVPGGEFMDEISL EETLDYISALQAQVDVMRCL TAY PSS
Subjt:  ERVKQISNSKITRSSWSSGKILKRSRRVRR-RNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNPSS

Query:  S
        S
Subjt:  S

A0A6J1JMR3 transcription factor IBH1-like 13.1e-6781.82Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS
        MRNPSSLKR+FLKKW+MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA  SV + S LVA+GLLGRAVCER+KQ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWS

Query:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET
        SGKILKRSRRV RR KC+K  AAE +A+RLVQKRT+ LRGLVPGGEFMDE+SL EETLDYI ALQ QVDVMRCL T
Subjt:  SGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLET

SwissProt top hitse value%identityAlignment
Q9M0B9 Transcription factor IBH1-like 13.5e-2844.44Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVK--QISNSKITRSS
        M+  SS+  EFLKKW MGLQI+  S +N +V ERK AIKLSAD+A+AS R   T WSRA+I   + +       D  L R +   +K   + N K+ + +
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVK--QISNSKITRSS

Query:  WSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFM-DEISLFEETLDYISALQAQVDVMRCLETA
            KI++RS+++ RR        A + AKRLV++RT+ LR +VPGGE M +++ L +ETLDYI +LQ QV+VMR +  A
Subjt:  WSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFM-DEISLFEETLDYISALQAQVDVMRCLETA

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 11.2e-0429.73Show/hide
Query:  RKTAIKLSADIALASSRNCATR-WSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQ
        R   IK +A +++A +   ++R WSRA++  A  D                       ++KI R S    KI  + RR  +R               +V+
Subjt:  RKTAIKLSADIALASSRNCATR-WSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQ

Query:  KRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNP
        +  + LR LVPGG  M+   L EET  YI  L  QV VM+CL    +P
Subjt:  KRTKVLRGLVPGGEFMDEISLFEETLDYISALQAQVDVMRCLETAYNP

AT4G30410.1 sequence-specific DNA binding transcription factors2.5e-2944.44Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVK--QISNSKITRSS
        M+  SS+  EFLKKW MGLQI+  S +N +V ERK AIKLSAD+A+AS R   T WSRA+I   + +       D  L R +   +K   + N K+ + +
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVK--QISNSKITRSS

Query:  WSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFM-DEISLFEETLDYISALQAQVDVMRCLETA
            KI++RS+++ RR        A + AKRLV++RT+ LR +VPGGE M +++ L +ETLDYI +LQ QV+VMR +  A
Subjt:  WSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFM-DEISLFEETLDYISALQAQVDVMRCLETA

AT4G30410.2 sequence-specific DNA binding transcription factors2.5e-2944.44Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVK--QISNSKITRSS
        M+  SS+  EFLKKW MGLQI+  S +N +V ERK AIKLSAD+A+AS R   T WSRA+I   + +       D  L R +   +K   + N K+ + +
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVK--QISNSKITRSS

Query:  WSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFM-DEISLFEETLDYISALQAQVDVMRCLETA
            KI++RS+++ RR        A + AKRLV++RT+ LR +VPGGE M +++ L +ETLDYI +LQ QV+VMR +  A
Subjt:  WSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFM-DEISLFEETLDYISALQAQVDVMRCLETA

AT5G57780.1 EXPRESSED IN: 18 plant structures1.2e-1838.86Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNEN-MTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSW
        M   + +K+EF+KKW+  L +  +S E+ + VTERK AI+LS+D+A+A++RN +T WSRA+I+ +                       + +N  + R   
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNEN-MTVTERKTAIKLSADIALASSRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSW

Query:  SSGKILKRSRRVRRRNKCKKVVA-AESVAKRLVQKRTKVLRGLVPGGEFMDEIS-LFEETLDYISALQAQVDVMR
           +ILK++R  R +N+C  +       AK  V+KRT +L+ LVPGGE +D+   L  ETLDYI  L+AQVDVMR
Subjt:  SSGKILKRSRRVRRRNKCKKVVA-AESVAKRLVQKRTKVLRGLVPGGEFMDEIS-LFEETLDYISALQAQVDVMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTAGCACATAAATTGGTTTGTGCACATTCTTCTATCTCTCTCTATAAACTCTCTTGGATCTGTAAATCTTCTGCTTCTGTCTGCACACAACTAATCCTT
TTCTCTCTCAATTTTACAATTTTCTTCATTTTATCTCTTCTCTTATTATACCACACATTTCCCAGAATGCGAAACCCCAGTTCGTTAAAACGAGAATTTTTGAAG
AAATGGATGATGGGTCTTCAAATATACACAACCTCCAACGAAAACATGACCGTCACCGAGAGAAAAACCGCCATTAAATTATCTGCAGACATAGCTTTAGCCTCC
TCTCGAAACTGCGCCACCCGGTGGAGCCGAGCGGTAATCGCCAGCGCCTCCGTCGATAACCGAAGCCGTCTAGTGGCCGACGGCTTACTGGGCCGGGCCGTATGC
GAGAGGGTGAAGCAAATCAGCAATTCCAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTCTGAAAAGAAGCCGCCGTGTGCGGCGGAGGAATAAATGTAAG
AAAGTGGTGGCGGCGGAGTCGGTTGCAAAAAGATTGGTGCAAAAAAGAACGAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTG
TTTGAAGAAACCCTAGATTATATATCGGCTCTTCAAGCTCAAGTTGATGTAATGAGGTGTCTTGAAACTGCATACAATCCATCATCATCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTAGCACATAAATTGGTTTGTGCACATTCTTCTATCTCTCTCTATAAACTCTCTTGGATCTGTAAATCTTCTGCTTCTGTCTGCACACAACTAATCCTT
TTCTCTCTCAATTTTACAATTTTCTTCATTTTATCTCTTCTCTTATTATACCACACATTTCCCAGAATGCGAAACCCCAGTTCGTTAAAACGAGAATTTTTGAAG
AAATGGATGATGGGTCTTCAAATATACACAACCTCCAACGAAAACATGACCGTCACCGAGAGAAAAACCGCCATTAAATTATCTGCAGACATAGCTTTAGCCTCC
TCTCGAAACTGCGCCACCCGGTGGAGCCGAGCGGTAATCGCCAGCGCCTCCGTCGATAACCGAAGCCGTCTAGTGGCCGACGGCTTACTGGGCCGGGCCGTATGC
GAGAGGGTGAAGCAAATCAGCAATTCCAAAATCACGCGAAGTTCATGGAGTAGTGGGAAGATTCTGAAAAGAAGCCGCCGTGTGCGGCGGAGGAATAAATGTAAG
AAAGTGGTGGCGGCGGAGTCGGTTGCAAAAAGATTGGTGCAAAAAAGAACGAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCGTTG
TTTGAAGAAACCCTAGATTATATATCGGCTCTTCAAGCTCAAGTTGATGTAATGAGGTGTCTTGAAACTGCATACAATCCATCATCATCATCATGAAAATCCCAA
ATTTTAATTATAATTAATCCCCTTTTTTTGTTTATTTATTTTCTTTTTTGGCCAACATTCGTATGATGAATGTGGAGGGAGAAAGTTATGGGCCC
Protein sequenceShow/hide protein sequence
MPLAHKLVCAHSSISLYKLSWICKSSASVCTQLILFSLNFTIFFILSLLLLYHTFPRMRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKTAIKLSADIALAS
SRNCATRWSRAVIASASVDNRSRLVADGLLGRAVCERVKQISNSKITRSSWSSGKILKRSRRVRRRNKCKKVVAAESVAKRLVQKRTKVLRGLVPGGEFMDEISL
FEETLDYISALQAQVDVMRCLETAYNPSSSS