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ClCG06G013370 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G013370
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionOxysterol-binding protein-related protein 4B-like
Genome locationCG_Chr06:26707060..26707572
RNA-Seq ExpressionClCG06G013370
SyntenyClCG06G013370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058273.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa]6.9e-6078.67Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQ----PKPKKNPCPLDHDNSNERPR
        MSRSSRFYYRRTTEGVPFQWE QPGTPK+NPPLTEV+PPPISPPPA LSLG SKP VRVVQNKQ +F+LFGPWRKQ    PKPKKNPCPLD + +NER R
Subjt:  MSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQ----PKPKKNPCPLDHDNSNERPR

Query:  FDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        FDSCGS CE M +SSCK +S P  ESSG  R+GCGPWRINPIKI +GRRV
Subjt:  FDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

XP_004146363.1 uncharacterized protein LOC101210202 [Cucumis sativus]1.6e-7283.24Show/hide
Query:  MKEEKN-GELFVLPLDNNFPSRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK
        MKEEKN  ELFVLPLD NFPSRNSSMSRSSRFYYRRTTEGVPFQWE QPGTPKNNPPLTEV+ PPISPPPA LSLGLSKP VR VQNKQP+F+LFGPWRK
Subjt:  MKEEKN-GELFVLPLDNNFPSRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK

Query:  Q--PKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        Q  PKPKKNPCPLD +N NER RFDSCGS CE M +SSCK KS PA  SSGH R+GCGPWRINPIKI +GRRV
Subjt:  Q--PKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

XP_023007086.1 uncharacterized protein LOC111499680 [Cucurbita maxima]1.3e-4260.89Show/hide
Query:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK
        MK+EK+   FVL LD N PSR SS+  SSR +YYRRTTEGVPFQWE QPGTPK +PP TE V   I+PPPAALSL   KPA      KQ +FLLF PWRK
Subjt:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK

Query:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAK--------SLPATESSGHLRVGCGPWRINPIKIAIGRRV
        Q K KK+ C L  +  + R RF SCGS CEF++ S C+ K        SLPA ESS H R+GCGPWRINP++IAIGRRV
Subjt:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAK--------SLPATESSGHLRVGCGPWRINPIKIAIGRRV

XP_023530969.1 uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]2.0e-4360.89Show/hide
Query:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK
        MK+EK+   FVLPLD N PSR SS+  SSR +YYRRTTEGVPFQWE QPGTPK+  P TE V   I+PPPAALSL   KPA    Q KQ +FLLF PWRK
Subjt:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK

Query:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFME--------KSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        Q K KK+ C L  +  + R RF SCGS CEF++         SS    SLPA ESS H R+GCGPWRINP++IAIGRRV
Subjt:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFME--------KSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

XP_038878338.1 uncharacterized protein LOC120070597 [Benincasa hispida]3.2e-6585.62Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQPKPKKNPCPLDHDNSNERPRFDSC
        MSRSSRFYYRRTTEGVPFQWE QPGTPKN PPLT+VVPPPISPPPA LSL LSKP  R VQNKQP+F+LFGPW KQ KPKKNPCPLDH+N  ER RFDSC
Subjt:  MSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQPKPKKNPCPLDHDNSNERPRFDSC

Query:  GSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        GSHCEFME+SSCKAKSL A ESSGH RVGCGPWRINPIKIA GRRV
Subjt:  GSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

TrEMBL top hitse value%identityAlignment
A0A0A0LUL8 Uncharacterized protein7.6e-7383.24Show/hide
Query:  MKEEKN-GELFVLPLDNNFPSRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK
        MKEEKN  ELFVLPLD NFPSRNSSMSRSSRFYYRRTTEGVPFQWE QPGTPKNNPPLTEV+ PPISPPPA LSLGLSKP VR VQNKQP+F+LFGPWRK
Subjt:  MKEEKN-GELFVLPLDNNFPSRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK

Query:  Q--PKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        Q  PKPKKNPCPLD +N NER RFDSCGS CE M +SSCK KS PA  SSGH R+GCGPWRINPIKI +GRRV
Subjt:  Q--PKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

A0A2N9IW61 Uncharacterized protein1.3e-1942.33Show/hide
Query:  DNNFP---SRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQ-----PIFLLFGPWRKQPKPKKN
        D NF    SRNSS+  SSR YY R  EGVPF WE QPG  K  PP  EV+ PPISPPPA LSLGL KP + V  +KQ     P  L F    K+ K  KN
Subjt:  DNNFP---SRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQ-----PIFLLFGPWRKQPKPKKN

Query:  -----PCPL-DHDNSNERPRFDSCGSHCEFMEK----------SSCKAKSLPATESSG---------HLRVGCGPWRINPIKIAIGRRV
              C    HD S++  RF+ C S CEFM            SS    + P  +SS          H  + C PW I+ I ++I RR+
Subjt:  -----PCPL-DHDNSNERPRFDSCGSHCEFMEK----------SSCKAKSLPATESSG---------HLRVGCGPWRINPIKIAIGRRV

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like3.3e-6078.67Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQ----PKPKKNPCPLDHDNSNERPR
        MSRSSRFYYRRTTEGVPFQWE QPGTPK+NPPLTEV+PPPISPPPA LSLG SKP VRVVQNKQ +F+LFGPWRKQ    PKPKKNPCPLD + +NER R
Subjt:  MSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQ----PKPKKNPCPLDHDNSNERPR

Query:  FDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        FDSCGS CE M +SSCK +S P  ESSG  R+GCGPWRINPIKI +GRRV
Subjt:  FDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

A0A6J1EQV3 uncharacterized protein LOC1114366861.8e-4260.11Show/hide
Query:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK
        MK+EK+   FVL LD N PSR SS+  SSR +YYRRTTEGVPFQWE QPGTPK +PP TE V   I+PPPAALSL   KPA      KQ +FLLF PWRK
Subjt:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK

Query:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFME-------KSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV
        Q K +K+ C L  +  + R RF SCGS CEF++        SS    SLPA ESS H R+GCGPWRINP++IAIGRRV
Subjt:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFME-------KSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV

A0A6J1KZJ1 uncharacterized protein LOC1114996806.3e-4360.89Show/hide
Query:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK
        MK+EK+   FVL LD N PSR SS+  SSR +YYRRTTEGVPFQWE QPGTPK +PP TE V   I+PPPAALSL   KPA      KQ +FLLF PWRK
Subjt:  MKEEKNGELFVLPLDNNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRK

Query:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAK--------SLPATESSGHLRVGCGPWRINPIKIAIGRRV
        Q K KK+ C L  +  + R RF SCGS CEF++ S C+ K        SLPA ESS H R+GCGPWRINP++IAIGRRV
Subjt:  QPKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAK--------SLPATESSGHLRVGCGPWRINPIKIAIGRRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)2.6e-1256.34Show/hide
Query:  SSMSRSSR--FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIF
        SS+SR+S   +Y  R  EGVPF+WE QPGTP N  P  EVV PP+SPPPA LSLGL KP++ + + K  +F
Subjt:  SSMSRSSR--FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIF

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B2.6e-1256.34Show/hide
Query:  SSMSRSSR--FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIF
        SS+SR+S   +Y  R  EGVPF+WE QPGTP N  P  EVV PP+SPPPA LSLGL KP++ + + K  +F
Subjt:  SSMSRSSR--FYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAGAAAAAAATGGTGAATTGTTTGTTCTTCCTTTGGATAATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTCGTTTCTACTACAGAAGAACCAC
TGAAGGAGTTCCATTTCAGTGGGAGAAACAACCGGGGACTCCCAAGAATAATCCACCGCTCACGGAGGTCGTTCCGCCGCCGATCAGCCCTCCACCGGCCGCGCTCAGCC
TTGGTTTGTCGAAGCCGGCCGTCAGAGTTGTTCAGAATAAACAACCGATTTTTTTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTG
GATCATGATAATAGCAACGAACGTCCGAGATTTGACTCTTGTGGGTCCCACTGTGAGTTTATGGAAAAATCATCGTGCAAAGCAAAATCTCTACCGGCGACGGAATCTTC
CGGTCACTTACGGGTGGGATGCGGTCCGTGGAGGATCAACCCGATTAAAATTGCAATAGGAAGGCGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAGAAAAAAATGGTGAATTGTTTGTTCTTCCTTTGGATAATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTCGTTTCTACTACAGAAGAACCAC
TGAAGGAGTTCCATTTCAGTGGGAGAAACAACCGGGGACTCCCAAGAATAATCCACCGCTCACGGAGGTCGTTCCGCCGCCGATCAGCCCTCCACCGGCCGCGCTCAGCC
TTGGTTTGTCGAAGCCGGCCGTCAGAGTTGTTCAGAATAAACAACCGATTTTTTTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTG
GATCATGATAATAGCAACGAACGTCCGAGATTTGACTCTTGTGGGTCCCACTGTGAGTTTATGGAAAAATCATCGTGCAAAGCAAAATCTCTACCGGCGACGGAATCTTC
CGGTCACTTACGGGTGGGATGCGGTCCGTGGAGGATCAACCCGATTAAAATTGCAATAGGAAGGCGAGTTTAA
Protein sequenceShow/hide protein sequence
MKEEKNGELFVLPLDNNFPSRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQPKPKKNPCPL
DHDNSNERPRFDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV