; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G013435 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G013435
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionU4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Genome locationCG_Chr06:26784341..26785045
RNA-Seq ExpressionClCG06G013435
SyntenyClCG06G013435
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR013957 - U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587747.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]9.4e-9288.03Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERD          R+RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRS DRHR+RSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

KAG6589703.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]2.0e-9490.6Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRY DRERD D+RERDRRRDRED     RDRDRERRR+++DRD ERERGR KRSHTP+R RSRHTRSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRS RRRHRSPSPDH RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKDSVGGGE VEEAMADEDEIEMMKKLGIPVGFDSTKGKPV G
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_004146322.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus]1.9e-10095.3Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERDRRRDREDRDHRERDRDRERRRDQ+DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+VGGGEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_008453595.1 PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo]3.8e-10195.73Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERDRRRDREDRDHRERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_023530476.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo]1.9e-9288.03Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERD          R+RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRSPDRHR+RSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

TrEMBL top hitse value%identityAlignment
A0A0A0LU61 SNRNP27 domain-containing protein9.1e-10195.3Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERDRRRDREDRDHRERDRDRERRRDQ+DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR SRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+VGGGEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A1S3BW27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.8e-10195.73Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERDRRRDREDRDHRERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A5D3CK71 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.8e-10195.73Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERDRRRDREDRDHRERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A6J1EW85 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like1.3e-9187.61Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERD            RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRS DRHR+RSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A6J1L1Y6 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like7.7e-9287.18Show/hide
Query:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDR RDRDKDRDRDRYKDRERD DHRERD          R+RDR+RERRRD++DRDRERERGRSKRSHTPDR RSRHTRSRTRSPD+HR+RSL
Subjt:  MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRS RRRHRSPSP+HARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

SwissProt top hitse value%identityAlignment
Q6DDA4 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.6e-0639.38Show/hide
Query:  RRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKE
        R R R     RER R R   R++E R RER R R +R            RSR+RSP R RSR          S RRHRS S    R + RRD   DD+K+
Subjt:  RRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKE

Query:  RQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
         +++       IA E  + K                  E+EIEMMK +G    FD++KGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  RQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q6DH74 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.8e-0841.34Show/hide
Query:  RERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSR--RRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAK
        R R R    R+R R R  S+     DR R R  R R+RS DR R RS SR+P  R SR  RRHRS S    R++ RRD    D KE+   V      I+ 
Subjt:  RERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSR--RRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAK

Query:  EQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        E  + K                  E+EIEMMK +G    F+++KGK   G+     V V  KR+ RQYMNR+GGFNRPL
Subjt:  EQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q6GLZ8 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.5e-0739.7Show/hide
Query:  RRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKE
        R R R     RER R R   R++E R RER R R +R            RSR+RSP R RSR          S RRHRS S   +R + RRD   DD+KE
Subjt:  RRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTADDEKE

Query:  RQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMAD------EDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
                              K+S GGG    +  A+      E+EIEMMK +G    FDS+KGK   G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  RQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMAD------EDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein6.1e-0941.12Show/hide
Query:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD
        R R R   RE R  R   RDRERRR +  R RER+R                 RSR+RSP R RSR          S RRHRS SP  +R + RR    D
Subjt:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD

Query:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        +EK+  K +        K + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein5.1e-0840.61Show/hide
Query:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD
        R R R   RE R  R   R+RERRR +  R RER+R                 RSR+RSP R RSR          S RRHRS SP  +R + RR    D
Subjt:  RERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRRDLTAD

Query:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        +EK+  K          K + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Arabidopsis top hitse value%identityAlignment
AT5G57370.1 unknown protein1.4e-3756.6Show/hide
Query:  DRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERG---RSKRSHTPD-RARSRHTRSRTRSPDRHRSRSLS---RTPE
        +RD+ R+R+R KDRE D     RDRRR R+DRD R+RDRDRER     DR+R+R+RG   +  RS TPD  AR+RH     RSP+R+RSRS S       
Subjt:  DRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERG---RSKRSHTPD-RARSRHTRSRTRSPDRHRSRSLS---RTPE

Query:  DRSSRRRHRSPSPDHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVP
        DR    R RSPSPD   ++  R  + DDEKE  R++ V+D VD     I K++ KQ ++    GGGE  +E   D +EIEMMK LGIP GFDSTKGKPV 
Subjt:  DRSSRRRHRSPSPDHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVP

Query:  GADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        GADVSG+R VTKRQPRQYMNRRGGFNRPLPAER R
Subjt:  GADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACCGTGAACGAGATAGAGATAGAGTCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGTGACCATGACCACCGTGAACGT
GACCGGCGTAGGGATCGAGAAGATCGCGACCACCGTGAACGTGACCGGGACCGTGAACGGCGTAGGGATCAAGAAGACCGTGACCGTGAAAGGGAGCGTGGCCGG
AGTAAAAGGTCACACACTCCCGACCGCGCCAGATCCCGCCACACACGCTCTCGTACCCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAG
GACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACGGGATTTGACTGCGGACGATGAAAAGGAGCGGCAGAAAGCA
GTTTCTGACTTCGTTGATGGCATTGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAA
GATGAAATTGAGATGATGAAGAAATTAGGCATTCCAGTGGGTTTCGATTCAACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACC
AAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGACCGTGAACGAGATAGAGATAGAGTCCGCGACAGAGATAAAGATCGGGACCGTGATAGATACAAAGACCGGGAGCGTGACCATGACCACCGTGAACGT
GACCGGCGTAGGGATCGAGAAGATCGCGACCACCGTGAACGTGACCGGGACCGTGAACGGCGTAGGGATCAAGAAGACCGTGACCGTGAAAGGGAGCGTGGCCGG
AGTAAAAGGTCACACACTCCCGACCGCGCCAGATCCCGCCACACACGCTCTCGTACCCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAG
GACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACGGGATTTGACTGCGGACGATGAAAAGGAGCGGCAGAAAGCA
GTTTCTGACTTCGTTGATGGCATTGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAA
GATGAAATTGAGATGATGAAGAAATTAGGCATTCCAGTGGGTTTCGATTCAACCAAGGGCAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACC
AAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGGTAG
Protein sequenceShow/hide protein sequence
MVDRERDRDRVRDRDKDRDRDRYKDRERDHDHRERDRRRDREDRDHRERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPE
DRSSRRRHRSPSPDHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVT
KRQPRQYMNRRGGFNRPLPAERTR