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ClCG06G013880 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G013880
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr06:27292084..27292570
RNA-Seq ExpressionClCG06G013880
SyntenyClCG06G013880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589671.1 hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3674.07Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        M SSHF+FF LLF +FYLL V  L SPP    S G PARKYLG+S SNP+SE+ +VKVHEDEF+RPSAKDI+SN PEYEASI+ +GELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

KGN65505.1 hypothetical protein Csa_019778 [Cucumis sativus]7.5e-3675Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        MRSSHFIFFCLLFT FYL  +D LHSPP  F SEG  ARKYLGTS S+        +VHEDEF+RPS KD +SNTPEYEASI SLGELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_022921360.1 uncharacterized protein LOC111429652 [Cucurbita moschata]7.5e-3673.15Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        M SSHF+FF LLF +FYLL V  L SPP    S G PARKYLG+S SNP+SE+ +V+VHEDEF+RPSAKDI+SN PEYEASI+ +GELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_022987350.1 uncharacterized protein LOC111484929 [Cucurbita maxima]1.4e-3471.3Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        M SSHF+FF LLF +FYLL V  L SPP   +S G PARKYLG+  SNP+SE+ +V+VHEDE +RPSAKDI+SN PEYEASI+ +GELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_023515382.1 uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo]8.3e-3572.22Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        M SSHF+FF LLF +FYLL V  L SPP P+   G PARKYLG+S SNP+SE+ +V+VH+DEF+RPSAKDI+SN PEYEASI+ +GELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

TrEMBL top hitse value%identityAlignment
A0A0A0LUD6 Uncharacterized protein3.6e-3675Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        MRSSHFIFFCLLFT FYL  +D LHSPP  F SEG  ARKYLGTS S+        +VHEDEF+RPS KD +SNTPEYEASI SLGELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

A0A438CZ59 Uncharacterized protein2.1e-1244.74Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEG---TPARKY---LGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDY
        M+SS  +  CLL T FYLL   H HS      S      P R++   L  S SN K+EY  ++  +DE  +PS     S   E+ +S E+L E+VYH DY
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEG---TPARKY---LGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDY

Query:  HGVTTHPNPTPKHP
        HGV THP PTPKHP
Subjt:  HGVTTHPNPTPKHP

A0A5D3DYI5 Uncharacterized protein1.6e-3178.65Show/hide
Query:  VDHLHSPPQPFVSEGTPARKYLGTSISN-PKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTHPNPTPKHP
        +D LHSPP+ F SEG PARKYLGTS SN PKSEYH  +VHEDEF+RPS KD++SNTPE+EASI SLGEL+YH DYHGVTTHPNPTPKHP
Subjt:  VDHLHSPPQPFVSEGTPARKYLGTSISN-PKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTHPNPTPKHP

A0A6J1E5F1 uncharacterized protein LOC1114296523.6e-3673.15Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        M SSHF+FF LLF +FYLL V  L SPP    S G PARKYLG+S SNP+SE+ +V+VHEDEF+RPSAKDI+SN PEYEASI+ +GELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

A0A6J1JGL7 uncharacterized protein LOC1114849296.9e-3571.3Show/hide
Query:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH
        M SSHF+FF LLF +FYLL V  L SPP   +S G PARKYLG+  SNP+SE+ +V+VHEDE +RPSAKDI+SN PEYEASI+ +GELVYH DYHGVTTH
Subjt:  MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTGTCTTCTATCTTCTTTTAGTGGATCATTTGCATTCTCCACCTCAACCTTTCGTCTCCGAAGGAACACC
TGCAAGAAAGTACCTTGGTACATCAATTTCCAATCCCAAATCTGAATACCACAGAGTCAAGGTTCATGAAGATGAGTTTAGTAGACCGTCTGCAAAAGACATTACCTCCA
ACACACCTGAATATGAAGCAAGTATCGAGAGTTTGGGTGAACTTGTCTACCACACCGACTATCATGGAGTGACAACACATCCAAACCCAACGCCAAAACACCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTGTCTTCTATCTTCTTTTAGTGGATCATTTGCATTCTCCACCTCAACCTTTCGTCTCCGAAGGAACACC
TGCAAGAAAGTACCTTGGTACATCAATTTCCAATCCCAAATCTGAATACCACAGAGTCAAGGTTCATGAAGATGAGTTTAGTAGACCGTCTGCAAAAGACATTACCTCCA
ACACACCTGAATATGAAGCAAGTATCGAGAGTTTGGGTGAACTTGTCTACCACACCGACTATCATGGAGTGACAACACATCCAAACCCAACGCCAAAACACCCATAG
Protein sequenceShow/hide protein sequence
MRSSHFIFFCLLFTVFYLLLVDHLHSPPQPFVSEGTPARKYLGTSISNPKSEYHRVKVHEDEFSRPSAKDITSNTPEYEASIESLGELVYHTDYHGVTTHPNPTPKHP