; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G013960 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G013960
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMethionine--tRNA ligase
Genome locationCG_Chr06:27401971..27402577
RNA-Seq ExpressionClCG06G013960
SyntenyClCG06G013960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262018.1 unnamed protein product [Prunus armeniaca]1.6e-0755.88Show/hide
Query:  ETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEEEFLVL--VSFRAPKPKRE
        E KTSPP N+++V M SW LEKTSIS  DMLET  AETEVK   +  G +E  VL   + R PKP++E
Subjt:  ETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEEEFLVL--VSFRAPKPKRE

EEF40241.1 conserved hypothetical protein [Ricinus communis]6.5e-0657.38Show/hide
Query:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRS--FGEEEFLVL
        +P+ E KTSPP N++VV++ SW LEK SIS  DML+T  AETEVKKM  S    E+E +VL
Subjt:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRS--FGEEEFLVL

GER36159.1 methionine--tRNA ligase [Striga asiatica]2.6e-0752.11Show/hide
Query:  WNPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEE-EFLVLVSFRAPKPKR
        W+P+ E KTSPP N++ VM  +W+ EKTSIS  DMLET  AET+VK    S G +   L    FR PKPK+
Subjt:  WNPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEE-EFLVLVSFRAPKPKR

TKW06428.1 hypothetical protein SEVIR_7G242050v2 [Setaria viridis]2.7e-0459.57Show/hide
Query:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKM
        +PT++  TSPP NM  VM+RSW LE TSIS  DML+T  A+T VK M
Subjt:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKM

TrEMBL top hitse value%identityAlignment
A0A2P2NP09 Uncharacterized protein3.9e-0466.67Show/hide
Query:  ETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKK
        ET TSPPRNMR V   SW+ EKTSIS  DML+T  A+T+VKK
Subjt:  ETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKK

A0A4U6TTQ3 Uncharacterized protein1.3e-0459.57Show/hide
Query:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKM
        +PT++  TSPP NM  VM+RSW LE TSIS  DML+T  A+T VK M
Subjt:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKM

A0A5A7PTK5 Methionine--tRNA ligase1.3e-0752.11Show/hide
Query:  WNPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEE-EFLVLVSFRAPKPKR
        W+P+ E KTSPP N++ VM  +W+ EKTSIS  DMLET  AET+VK    S G +   L    FR PKPK+
Subjt:  WNPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEE-EFLVLVSFRAPKPKR

A0A6J5TH56 Uncharacterized protein7.5e-0855.88Show/hide
Query:  ETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEEEFLVL--VSFRAPKPKRE
        E KTSPP N+++V M SW LEKTSIS  DMLET  AETEVK   +  G +E  VL   + R PKP++E
Subjt:  ETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRSFGEEEFLVL--VSFRAPKPKRE

B9S7S5 Uncharacterized protein3.2e-0657.38Show/hide
Query:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRS--FGEEEFLVL
        +P+ E KTSPP N++VV++ SW LEK SIS  DML+T  AETEVKKM  S    E+E +VL
Subjt:  NPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLETETAETEVKKMLRS--FGEEEFLVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTAAACAAGAACCAACACCATTTGTCGTCAAAAGATATCCAATTATCGTACGACCCAAAAGCTTTGAACATGATTTTGAGATACTCAACTCATCAATG
GTGGCCGTCGTTGATGACGACGTCCCACTTTCCATCTCAATGGACCGAGCCGAATCGACTTGGTTTTTCTCGTTCAAGTATTTGAACCGGCGAGAGAGTTGGAAC
CCGACGGCAGAGACGAAGACTTCGCCGCCGAGGAACATGAGGGTGGTGATGATGAGGAGTTGGAAATTGGAAAAAACTTCCATTTCAATGACAGACATGCTTGAA
ACGGAGACGGCAGAGACGGAGGTGAAGAAAATGTTGAGGTCATTTGGGGAGGAGGAGTTTCTAGTTTTGGTGAGCTTTAGAGCTCCAAAGCCTAAGAGAGAGATG
ACAAGAAGGGGCTGGCGACCGGTAGCGGCAACCGGAGAAGAGAACGCGGAGGAGATCGGAGGATGTAGAGAGGTAAGTTCTTCATGTTGGGGTTTTGTGCGGCGG
TTGGAAGATGGCCGGCCGGGGAGATTTGGAGGAAGGAGAGTGGAGTGGAGGGGATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTAAACAAGAACCAACACCATTTGTCGTCAAAAGATATCCAATTATCGTACGACCCAAAAGCTTTGAACATGATTTTGAGATACTCAACTCATCAATG
GTGGCCGTCGTTGATGACGACGTCCCACTTTCCATCTCAATGGACCGAGCCGAATCGACTTGGTTTTTCTCGTTCAAGTATTTGAACCGGCGAGAGAGTTGGAAC
CCGACGGCAGAGACGAAGACTTCGCCGCCGAGGAACATGAGGGTGGTGATGATGAGGAGTTGGAAATTGGAAAAAACTTCCATTTCAATGACAGACATGCTTGAA
ACGGAGACGGCAGAGACGGAGGTGAAGAAAATGTTGAGGTCATTTGGGGAGGAGGAGTTTCTAGTTTTGGTGAGCTTTAGAGCTCCAAAGCCTAAGAGAGAGATG
ACAAGAAGGGGCTGGCGACCGGTAGCGGCAACCGGAGAAGAGAACGCGGAGGAGATCGGAGGATGTAGAGAGGTAAGTTCTTCATGTTGGGGTTTTGTGCGGCGG
TTGGAAGATGGCCGGCCGGGGAGATTTGGAGGAAGGAGAGTGGAGTGGAGGGGATTATAA
Protein sequenceShow/hide protein sequence
MKIKQEPTPFVVKRYPIIVRPKSFEHDFEILNSSMVAVVDDDVPLSISMDRAESTWFFSFKYLNRRESWNPTAETKTSPPRNMRVVMMRSWKLEKTSISMTDMLE
TETAETEVKKMLRSFGEEEFLVLVSFRAPKPKREMTRRGWRPVAATGEENAEEIGGCREVSSSCWGFVRRLEDGRPGRFGGRRVEWRGL