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ClCG06G014660 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G014660
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReticulon family protein
Genome locationCG_Chr06:28098100..28098483
RNA-Seq ExpressionClCG06G014660
SyntenyClCG06G014660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER32793.1 reticulon family protein [Striga asiatica]2.8e-1344.53Show/hide
Query:  SIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGV----VLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVD
        S P+PL+++     +DE   V     PVDP +  VGV       E  + EG +VVLV V R L    E  E   VGDDL    +V  EPLGALAP+ E +
Subjt:  SIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGV----VLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVD

Query:  CGAHFWAVTAAAHWAWKVVGLNESGFGA
           H   V AAAHWAW+VVGL+E   GA
Subjt:  CGAHFWAVTAAAHWAWKVVGLNESGFGA

KAA0058092.1 hypothetical protein E6C27_scaffold274G004000 [Cucumis melo var. makuwa]1.1e-4676.42Show/hide
Query:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG
        MA+ P+ LKQ NGDIGSDEPG +RAASGPVDPS+GPVGV L E DSD+G +VVLVHVTR   EFLEDGE  L+GDDLGGDGSVHFEPLG L PLME+D G
Subjt:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG

Query:  AHFWAVTAAAHWAWKVVGLNESG
        AHFWAV A+AHWAWKV+GL+E G
Subjt:  AHFWAVTAAAHWAWKVVGLNESG

KAG7023305.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-4068.5Show/hide
Query:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG
        +A+ P+ L+Q+N DI S E GGV AA GPVDPS+GPVG+  GE DSDEGGEVVLVHVTRGL    EDGE FLVGD+LGG+GSV+ EPLGALAPL+EVDCG
Subjt:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG

Query:  AHFWAVTAAAHWAWKVVGLNESGFGAH
        AH   V A  HW+W+VVGL+E G G H
Subjt:  AHFWAVTAAAHWAWKVVGLNESGFGAH

PKA54109.1 hypothetical protein AXF42_Ash018119 [Apostasia shenzhenica]2.1e-1345.08Show/hide
Query:  PEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLV-HVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF
        P PL+Q +GD  +++P  + AA GPVDP E PVG    E D   GG+VVLV           EDGEE +VG+D+ G+ +   EPLGALAP    +  +H 
Subjt:  PEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLV-HVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF

Query:  WAVTAAAHWAWKVVGLNESGFG
         AV AAA  A  VV + E G G
Subjt:  WAVTAAAHWAWKVVGLNESGFG

PKA54256.1 hypothetical protein AXF42_Ash000089 [Apostasia shenzhenica]9.5e-0644Show/hide
Query:  PVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF
        P+D S+ P+   +  FD + GGEVVL+H+TR L E  E+     V ++   +  V  EPL ALAPL EVD   HF
Subjt:  PVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ5 Uncharacterized protein1.0e-4574.19Show/hide
Query:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG
        +A+IP+PLKQ  GDIGS+EPG V AASGP+DPS+GPVGV L E DS++GGEVVLVHV R   +FLEDGE  LVGDDLGGDGSVHFEPLG LAPLME+D  
Subjt:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG

Query:  AHFWAVTAAAHWAWKVVGLNESGF
         HFW V A+AHWAWKV+GLNE GF
Subjt:  AHFWAVTAAAHWAWKVVGLNESGF

A0A2I0AEY0 Uncharacterized protein1.0e-1345.08Show/hide
Query:  PEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLV-HVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF
        P PL+Q +GD  +++P  + AA GPVDP E PVG    E D   GG+VVLV           EDGEE +VG+D+ G+ +   EPLGALAP    +  +H 
Subjt:  PEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLV-HVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF

Query:  WAVTAAAHWAWKVVGLNESGFG
         AV AAA  A  VV + E G G
Subjt:  WAVTAAAHWAWKVVGLNESGFG

A0A2I0AFI3 Uncharacterized protein4.6e-0644Show/hide
Query:  PVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF
        P+D S+ P+   +  FD + GGEVVL+H+TR L E  E+     V ++   +  V  EPL ALAPL EVD   HF
Subjt:  PVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHF

A0A5A7PIV6 Reticulon family protein1.3e-1344.53Show/hide
Query:  SIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGV----VLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVD
        S P+PL+++     +DE   V     PVDP +  VGV       E  + EG +VVLV V R L    E  E   VGDDL    +V  EPLGALAP+ E +
Subjt:  SIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGV----VLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVD

Query:  CGAHFWAVTAAAHWAWKVVGLNESGFGA
           H   V AAAHWAW+VVGL+E   GA
Subjt:  CGAHFWAVTAAAHWAWKVVGLNESGFGA

A0A5D3DYP5 Uncharacterized protein5.4e-4776.42Show/hide
Query:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG
        MA+ P+ LKQ NGDIGSDEPG +RAASGPVDPS+GPVGV L E DSD+G +VVLVHVTR   EFLEDGE  L+GDDLGGDGSVHFEPLG L PLME+D G
Subjt:  MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCG

Query:  AHFWAVTAAAHWAWKVVGLNESG
        AHFWAV A+AHWAWKV+GL+E G
Subjt:  AHFWAVTAAAHWAWKVVGLNESG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTCCTGAGCCTCTGAAGCAATCCAACGGTGACATCGGTTCTGATGAACCGGGTGGGGTGCGCGCCGCCTCTGGACCAGTCGACCCAAGTGAGGGTCCGGT
TGGAGTTGTTCTTGGAGAATTTGATTCCGACGAAGGTGGGGAGGTAGTGCTCGTCCATGTAACAAGAGGGCTTACAGAATTTCTGGAAGACGGGGAAGAATTTCTGGTCG
GAGACGACTTGGGAGGCGATGGTTCGGTCCATTTCGAACCATTGGGAGCCCTTGCGCCATTGATGGAGGTTGATTGTGGGGCGCATTTTTGGGCTGTAACGGCCGCGGCC
CACTGGGCCTGGAAGGTCGTAGGCCTCAATGAAAGTGGATTTGGAGCCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTCCTGAGCCTCTGAAGCAATCCAACGGTGACATCGGTTCTGATGAACCGGGTGGGGTGCGCGCCGCCTCTGGACCAGTCGACCCAAGTGAGGGTCCGGT
TGGAGTTGTTCTTGGAGAATTTGATTCCGACGAAGGTGGGGAGGTAGTGCTCGTCCATGTAACAAGAGGGCTTACAGAATTTCTGGAAGACGGGGAAGAATTTCTGGTCG
GAGACGACTTGGGAGGCGATGGTTCGGTCCATTTCGAACCATTGGGAGCCCTTGCGCCATTGATGGAGGTTGATTGTGGGGCGCATTTTTGGGCTGTAACGGCCGCGGCC
CACTGGGCCTGGAAGGTCGTAGGCCTCAATGAAAGTGGATTTGGAGCCCATTAA
Protein sequenceShow/hide protein sequence
MASIPEPLKQSNGDIGSDEPGGVRAASGPVDPSEGPVGVVLGEFDSDEGGEVVLVHVTRGLTEFLEDGEEFLVGDDLGGDGSVHFEPLGALAPLMEVDCGAHFWAVTAAA
HWAWKVVGLNESGFGAH