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ClCG06G014670 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G014670
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionATP synthase subunit a
Genome locationCG_Chr06:28122224..28124041
RNA-Seq ExpressionClCG06G014670
SyntenyClCG06G014670
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domainsIPR035908 - ATP synthase, F0 complex, subunit A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABI74638.2 ATPase subunit 6 [Tripsacum dactyloides]8.2e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
ACD02155.1 ATPase subunit 6, partial [Celastrus scandens]3.7e-0688.89Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        MPLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
AUD39149.1 ATP synthase F0 subunit 6, partial [Cinchona pubescens]8.2e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
AUD39157.1 ATP synthase F0 subunit 6, partial [Guettarda scabra]8.2e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
QFO90905.1 ATPase subunit 6 [Cynodon dactylon x Cynodon transvaalensis]8.2e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
TrEMBL top hitse value%identityAlignment
A0A2I8BIH3 ATP synthase subunit a4.0e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
A0A4Y5QHU9 ATP synthase subunit a4.0e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
B2VPT7 ATP synthase subunit a (Fragment)1.8e-0688.89Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        MPLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
H5ZXG8 ATP synthase subunit a4.0e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
Q2F976 ATP synthase subunit a4.0e-0686.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
SwissProt top hitse value%identityAlignment
P05499 ATP synthase subunit a6.9e-0883.33Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI +CFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
P07925 ATP synthase subunit a1.1e-0886.11Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
        +PLAPFLVLLELI HCFRALSS I LFAN+MAGHSS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSS
P92547 ATP synthase subunit a-27.7e-0780Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
        +PLAPFLVLLELI +CFRALS  I LFAN+MAGHS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
P93298 ATP synthase subunit a-17.7e-0780Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
        +PLAPFLVLLELI +CFRALS  I LFAN+MAGHS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
Q31720 ATP synthase subunit a7.7e-0780Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
        +PLAPFLVLLELI +CFRALS  I LFAN+MAGHS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
Arabidopsis top hitse value%identityAlignment
AT2G07741.1 ATPase, F0 complex, subunit A protein5.5e-0880Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
        +PLAPFLVLLELI +CFRALS  I LFAN+MAGHS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
ATMG00410.1 ATPase subunit 6-15.5e-0880Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
        +PLAPFLVLLELI +CFRALS  I LFAN+MAGHS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
ATMG01170.1 ATPase, F0 complex, subunit A protein5.5e-0880Show/hide
Query:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS
        +PLAPFLVLLELI +CFRALS  I LFAN+MAGHS
Subjt:  MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTAGCACCTTTTTTAGTACTCCTTGAGCTAATCCTTCATTGTTTTCGCGCATTAAGCTCAAGAATACATTTATTTGCTAATATAATGGCCGGTCATAGT
TCAGAGTTTGGGGGCACACAAGAGGTGCGTGCTGAGTATGCCACCGTCAATGTTGGCACGAAAAAGGCTCGCTTGGGCCTTGGCTTAATGGGCATGCCTTATGCA
TGCCCTAACCGAAATGATCATCTAAGACCAGAGATATGGCTAAAGAAATGTGCTCGGCCTTGGCCTTGGCTGAAGCCGATCCTAGAAAAATACCAAACGAGGTAC
GCCCCGACTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATTAGCACCTTTTTTAGTACTCCTTGAGCTAATCCTTCATTGTTTTCGCGCATTAAGCTCAAGAATACATTTATTTGCTAATATAATGGCCGGTCATAGT
TCAGAGTTTGGGGGCACACAAGAGGTGCGTGCTGAGTATGCCACCGTCAATGTTGGCACGAAAAAGGCTCGCTTGGGCCTTGGCTTAATGGGCATGCCTTATGCA
TGCCCTAACCGAAATGATCATCTAAGACCAGAGATATGGCTAAAGAAATGTGCTCGGCCTTGGCCTTGGCTGAAGCCGATCCTAGAAAAATACCAAACGAGGTAC
GCCCCGACTCAATAG
Protein sequenceShow/hide protein sequence
MPLAPFLVLLELILHCFRALSSRIHLFANIMAGHSSEFGGTQEVRAEYATVNVGTKKARLGLGLMGMPYACPNRNDHLRPEIWLKKCARPWPWLKPILEKYQTRY
APTQ