; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G018280 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G018280
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAcyl carrier protein
Genome locationCG_Chr06:31220047..31221014
RNA-Seq ExpressionClCG06G018280
SyntenyClCG06G018280
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
GO:0031177 - phosphopantetheine binding (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR006162 - Phosphopantetheine attachment site
IPR009081 - Phosphopantetheine binding ACP domain
IPR020806 - Polyketide synthase, phosphopantetheine-binding domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138024.1 acyl carrier protein 4, chloroplastic [Cucumis sativus]3.8e-5087.69Show/hide
Query:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS
        SATSLRFC+P+N A KMNHNQL LRRS   RG LNNN     RVSCAAKPET+DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS
Subjt:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS

Query:  INIEEDNAQNITTVQEAADLIEDLVVKQQS
        INIEEDNAQNITTVQEAADLIE+LVVKQQS
Subjt:  INIEEDNAQNITTVQEAADLIEDLVVKQQS

XP_008464386.1 PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo]2.0e-5191.6Show/hide
Query:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
        SATSLRFCIP+N A KMNHNQL LRRS   +GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
Subjt:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF

Query:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS
        SINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS

XP_022987144.1 acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]8.7e-4782.27Show/hide
Query:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV
        S+T LRF IPLN A K N NQ  VLRRSSA   GLL +NGFHL         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTV
Subjt:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV

Query:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
        EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS

XP_023516582.1 acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]3.3e-4681.56Show/hide
Query:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV
        S+T LRF IPLN A K + NQ  VLRRSSA   GLL +NGFHL         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTV
Subjt:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV

Query:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
        EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS

XP_038879812.1 acyl carrier protein 4, chloroplastic-like [Benincasa hispida]4.8e-5391.6Show/hide
Query:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
        +SATSLRFC+PLN  TKMNHNQL LR SS  RGLLNNN FH LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEF
Subjt:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF

Query:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS
        SINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS

TrEMBL top hitse value%identityAlignment
A0A0A0LNR6 Acyl carrier protein1.8e-5087.69Show/hide
Query:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS
        SATSLRFC+P+N A KMNHNQL LRRS   RG LNNN     RVSCAAKPET+DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS
Subjt:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS

Query:  INIEEDNAQNITTVQEAADLIEDLVVKQQS
        INIEEDNAQNITTVQEAADLIE+LVVKQQS
Subjt:  INIEEDNAQNITTVQEAADLIEDLVVKQQS

A0A1S3CLC5 Acyl carrier protein9.7e-5291.6Show/hide
Query:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
        SATSLRFCIP+N A KMNHNQL LRRS   +GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
Subjt:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF

Query:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS
        SINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS

A0A6J1E6C1 Acyl carrier protein2.3e-4580.85Show/hide
Query:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV
        S+T L F IPLN A K N NQ  VLRRSSA   GLL +NGF L         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTV
Subjt:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV

Query:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
        EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS

A0A6J1JI20 Acyl carrier protein4.2e-4782.27Show/hide
Query:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV
        S+T LRF IPLN A K N NQ  VLRRSSA   GLL +NGFHL         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTV
Subjt:  SATSLRFCIPLNHATKMNHNQL-VLRRSSA-RRGLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTV

Query:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
        EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  EIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS

E5GBM2 Acyl carrier protein9.7e-5291.6Show/hide
Query:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
        SATSLRFCIP+N A KMNHNQL LRRS   +GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF
Subjt:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEF

Query:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS
        SINIEEDNAQNITTVQEAADLIEDLVVKQQS
Subjt:  SINIEEDNAQNITTVQEAADLIEDLVVKQQS

SwissProt top hitse value%identityAlignment
P52411 Acyl carrier protein 1, chloroplastic2.6e-2571.26Show/hide
Query:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        LRVSC AKPETV KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

P52412 Acyl carrier protein 2, chloroplastic4.0e-2662Show/hide
Query:  ARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        +R+   +  G   LRV+C AKPETV KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  ARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

P52414 Acyl carrier protein 4, chloroplastic7.5e-2570.93Show/hide
Query:  RVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        RVSC AKPETV KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  RVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

P93092 Acyl carrier protein 1, chloroplastic1.4e-2672.94Show/hide
Query:  VSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        V CAAKPETV+KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF IN+EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  VSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

Q9SW21 Acyl carrier protein 4, chloroplastic7.5e-2552.99Show/hide
Query:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT
        +S TSL F  P    ++      VLR++S+ + +      ++     L++SCAAK ETV KV  IV++QLAL     LT ESKF+ALGADSLDTVEI+M 
Subjt:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT

Query:  LEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        LEE+F+I++EE +AQNITT+QEAADLIEDLV K+
Subjt:  LEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 22.0e-2560.95Show/hide
Query:  SSARRGLLNNNGFHL---LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIED
        S+ RR  L+ N   L   L VSCAAKPETVDKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I + E+ AQ+I TV++AA LIE+
Subjt:  SSARRGLLNNNGFHL---LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIED

Query:  LVVKQ
        L+ ++
Subjt:  LVVKQ

AT1G54630.1 acyl carrier protein 31.3e-2465.52Show/hide
Query:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        L V CAAKPETVDKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I + E+ AQ+I TV++AA LIE+L++++
Subjt:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

AT4G25050.1 acyl carrier protein 45.3e-2652.99Show/hide
Query:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT
        +S TSL F  P    ++      VLR++S+ + +      ++     L++SCAAK ETV KV  IV++QLAL     LT ESKF+ALGADSLDTVEI+M 
Subjt:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMT

Query:  LEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        LEE+F+I++EE +AQNITT+QEAADLIEDLV K+
Subjt:  LEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

AT4G25050.2 acyl carrier protein 42.5e-2348.63Show/hide
Query:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDT------
        +S TSL F  P    ++      VLR++S+ + +      ++     L++SCAAK ETV KV  IV++QLAL     LT ESKF+ALGADSLDT      
Subjt:  VSATSLRFCIPLNHATKMNHNQLVLRRSSARRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDT------

Query:  ------VEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
              VEI+M LEE+F+I++EE +AQNITT+QEAADLIEDLV K+
Subjt:  ------VEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

AT5G27200.1 acyl carrier protein 51.0e-2150.4Show/hide
Query:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS
        SAT+ RFC  LN    + +N+     S + R L+       L VSCA K ETV+KV  IV+KQL+L +  ++T  +KF  LGADSLDTVEI+M LEEEF 
Subjt:  SATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFS

Query:  INIEEDNAQNITTVQEAADLIEDLV
        I + E+ A+ I TVQ+AA+LIE+LV
Subjt:  INIEEDNAQNITTVQEAADLIEDLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGAGAGGGAGAAGCAATGTCCACCTCTCGTCACAGTTAACCAAAAAGAACTACTTAATCCAATCCCTTCTCCTTCTCTCCCTCTCCCTCTCCCTCTCCCTCT
CCTCCTTGTTTCTGCTACCTCCCTCAGATTCTGCATACCTCTCAACCATGCTACCAAGATGAACCACAACCAGCTGGTTCTCAGAAGAAGCTCCGCCAGACGGGGATTGC
TTAATAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAACTTCA
GAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATTGAAGAGGATAA
TGCTCAGAATATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGAGAGGGAGAAGCAATGTCCACCTCTCGTCACAGTTAACCAAAAAGAACTACTTAATCCAATCCCTTCTCCTTCTCTCCCTCTCCCTCTCCCTCTCCCTCT
CCTCCTTGTTTCTGCTACCTCCCTCAGATTCTGCATACCTCTCAACCATGCTACCAAGATGAACCACAACCAGCTGGTTCTCAGAAGAAGCTCCGCCAGACGGGGATTGC
TTAATAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGAAACAATTGGCTTTGCCTGAAACTTCA
GAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACCTTAGAGGAAGAATTTAGCATCAATATTGAAGAGGATAA
TGCTCAGAATATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAAATGGCTATATAGGCTATTAGTATTTTAAAGTTGTATT
ATTCCAAGAGGCAGATGACAAGAGTTTGGTTGGGTTGGGTTGAGTAGGTAGGATG
Protein sequenceShow/hide protein sequence
MDMEREKQCPPLVTVNQKELLNPIPSPSLPLPLPLPLLLVSATSLRFCIPLNHATKMNHNQLVLRRSSARRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETS
ELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQQS