CuGenDBv2

Gene ID	ClCG06G018300
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Rubredoxin-like domain-containing protein
Genome location	CG_Chr06:31225509..31227077
RNA-Seq Expression	ClCG06G018300
Synteny	ClCG06G018300
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]

1.3e-77

86.05

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MAS+SASSL FHLPPKPH K+NQEDGG D NSMFL S S RLSLKSSF SPLRKIPSLR  NSV AAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQ+V+K+ N+FDVRKARK QIQKDEA+GKVLPIAAA+G+VALVGLYLYLNSAF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]

1.6e-77

86.05

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MASVSASSL FHLPPKPH K+NQEDGG D NSMFL S S RLSLKSSF SPLRKIPSLR  NSV AAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQ+VNK+ N+FD+RKARK QIQKDEA+GKVLPIAAA+G+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

1.5e-70

82.08

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MAS SASSL FHLPP PHSK+NQEDGGAD +SM  GS S R SLKSSF SPLR+IPS R     A AA PKFSMRVASKQAYICRDCGYIYNDRTPFEKL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPI-AAAVGVVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQSV K+ N+FDVRKARK QIQKDEA+GKVLPI AAAVG+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPI-AAAVGVVALVGLYLYLNSAF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

1.8e-71

81.98

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MAS SASSL FHLPP PHSK+NQEDGGAD  SM  GS S R SLKSSF SPLR+IPS R     A AA PKFSMRVASKQAYICRDCGYIYNDRTPFEKL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQSV K+ N+FDVRKARK QIQKDEA+GKVLPIAAAVG++ALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

XP_038880712.1 uncharacterized protein LOC120072320 isoform X1 [Benincasa hispida]

7.9e-72

84.88

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MASVSASSL FHLP KP SK   EDGGAD NSMF GSTS RLSLKSSF SPLRKIP   T  S AAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQSV K+AN+FDVRKARK +IQKDEA+GKVLPIAAAVG+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNF5 Rubredoxin-like domain-containing protein

6.1e-78

86.05

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MAS+SASSL FHLPPKPH K+NQEDGG D NSMFL S S RLSLKSSF SPLRKIPSLR  NSV AAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQ+V+K+ N+FDVRKARK QIQKDEA+GKVLPIAAA+G+VALVGLYLYLNSAF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X1

8.0e-78

86.05

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MASVSASSL FHLPPKPH K+NQEDGG D NSMFL S S RLSLKSSF SPLRKIPSLR  NSV AAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQ+VNK+ N+FD+RKARK QIQKDEA+GKVLPIAAA+G+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

A0A5A7UPF0 Rubredoxin family protein

8.0e-78

86.05

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MASVSASSL FHLPPKPH K+NQEDGG D NSMFL S S RLSLKSSF SPLRKIPSLR  NSV AAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQ+VNK+ N+FD+RKARK QIQKDEA+GKVLPIAAA+G+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

A0A6J1E6B5 uncharacterized protein LOC111429830 isoform X1

7.2e-71

82.08

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MAS SASSL FHLPP PHSK+NQEDGGAD +SM  GS S R SLKSSF SPLR+IPS R     A AA PKFSMRVASKQAYICRDCGYIYNDRTPFEKL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPI-AAAVGVVALVGLYLYLNSAF
        PD YFCPVCGAPKRRFRPYEQSV K+ N+FDVRKARK QIQKDEA+GKVLPI AAAVG+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPI-AAAVGVVALVGLYLYLNSAF

E5GBM0 Electron transporter

8.0e-78

86.05

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Query:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL
        MASVSASSL FHLPPKPH K+NQEDGG D NSMFL S S RLSLKSSF SPLRKIPSLR  NSV AAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KL
Subjt:  MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF
        PDKYFCPVCGAPKRRFRPYEQ+VNK+ N+FD+RKARK QIQKDEA+GKVLPIAAA+G+VALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

1.3e-05

41.07

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Query:  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE
        V++ + Y CR CGYIY+             TPFE LP+ + CP CGA K+ F+P +
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

7.9e-06

48.84

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Query:  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP
        Q Y+C  CGY Y    +D  PF++LPD + CPVCG  K +F P
Subjt:  QAYICRDCGYIY----NDRTPFEKLPDKYFCPVCGAPKRRFRP

P24297 Rubredoxin

2.3e-05

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Query:  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYE
        ++C+ CGYIY++            T FE+LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFEKLPDKYFCPVCGAPKRRFRPYE

P58992 Rubredoxin-1

3.3e-04

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Query:  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY
        +++C +CGYIY+              PF+KLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFEKLPDKYFCPVCGAPKRRFRPY

Q9AL94 Rubredoxin

1.9e-04

41.18

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Query:  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ
        Y+C  CGYIY           N  T FE +PD + CP+CG  K +F P E+
Subjt:  YICRDCGYIY-----------NDRTPFEKLPDKYFCPVCGAPKRRFRPYEQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

2.3e-08

40.32

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Query:  AGPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVNK
        A P+F  ++   Q     +IC DCG+IY     F++ PD Y CP C APK+RF  Y+ +  K
Subjt:  AGPKFSMRVASKQ----AYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVNK

AT5G51010.1 Rubredoxin-like superfamily protein

1.1e-42

64.06

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Query:  SLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQK
        +L+ S F P   +  L    S++ ++ P+FSMRV+SKQAYICRDCGYIYNDRTPF+KLPD YFCPVC APKRRFR Y   V+K+ ND DVRKARK ++Q+
Subjt:  SLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVNKDANDFDVRKARKTQIQK

Query:  DEAVGKVLPIAAAVGVVALVGLYLYLNS
        DEAVGK LPI  AVGV+AL  LY Y+NS
Subjt:  DEAVGKVLPIAAAVGVVALVGLYLYLNS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCGTTTCAGCTTCTTCTCTCAGATTCCACCTACCACCGAAGCCACATTCCAAGGTTAACCAGGAAGACGGCGGCGCTGATAGCAACTCCATGTTTTTGGGCTC
TACCTCCAAACGCTTATCTTTGAAATCCTCCTTCTTCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCCAAACTCTGTTGCTGCTGCCGCTGGCCCCAAGTTCTCCA
TGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAAAAATTGCCTGATAAGTATTTCTGTCCTGTCTGCGGA
GCTCCTAAGCGACGATTTAGACCTTATGAACAATCTGTGAATAAAGATGCTAACGATTTTGATGTGAGGAAGGCGAGAAAGACGCAGATCCAGAAAGATGAAGCTGTTGG
GAAGGTGCTGCCTATTGCTGCTGCAGTGGGAGTCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAG

mRNA sequence

Show/hide mRNA sequence

GTTTGCATTCACTATTCACCCATTCTCTCTGTTTTCTTTCTGCTGATCCCCCCATCCTTCTCTCTCATTTCAACTCCCTCCCTCTGCTTCAGCTTTACCTTCCTTCAATG
GCTTCCGTTTCAGCTTCTTCTCTCAGATTCCACCTACCACCGAAGCCACATTCCAAGGTTAACCAGGAAGACGGCGGCGCTGATAGCAACTCCATGTTTTTGGGCTCTAC
CTCCAAACGCTTATCTTTGAAATCCTCCTTCTTCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCCAAACTCTGTTGCTGCTGCCGCTGGCCCCAAGTTCTCCATGC
GCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAAAAATTGCCTGATAAGTATTTCTGTCCTGTCTGCGGAGCT
CCTAAGCGACGATTTAGACCTTATGAACAATCTGTGAATAAAGATGCTAACGATTTTGATGTGAGGAAGGCGAGAAAGACGCAGATCCAGAAAGATGAAGCTGTTGGGAA
GGTGCTGCCTATTGCTGCTGCAGTGGGAGTCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAGATCGAGTGGCTTGCTCACTGACGAGGGCTTAACA
TCATTTGTTTGAAGATATTCTTCCCGAGGCTGTTTTTTATTGATTTAGATATTATATGTATTTTTTCCATCCACTATCCAAAAACACTGGCAAATTGTTTAAGCTTTGCA
ATATTTTATATATACACTCAATTGTTTATTGATTATGTTTATTTGCACTTGGTGGAGTAGCCGTGTGCCTCACCTAATTTTATGGGCCTGTGGATGTGGCTTGGGGTAGA
CTGACTTTGGGATGAATATATTTTTG

Protein sequence

Show/hide protein sequence

MASVSASSLRFHLPPKPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFFSPLRKIPSLRTPNSVAAAAGPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCG
APKRRFRPYEQSVNKDANDFDVRKARKTQIQKDEAVGKVLPIAAAVGVVALVGLYLYLNSAF

ClCG06G018300 (gene) of Watermelon (Charleston Gray) v2.5 genome