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ClCG06G018355 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G018355
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAlpha-mannosidase
Genome locationCG_Chr06:31277643..31278252
RNA-Seq ExpressionClCG06G018355
SyntenyClCG06G018355
Gene Ontology termsGO:0006013 - mannose metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004559 - alpha-mannosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011013 - Galactose mutarotase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922002.1 probable alpha-mannosidase At5g13980 isoform X1 [Cucurbita moschata]2.4e-2391.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGEKALRGGPVNSAKLVVELAPMEIRTFL+DFT K
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

XP_022987146.1 probable alpha-mannosidase At5g13980 isoform X1 [Cucurbita maxima]8.3e-2491.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGE ALRGGPVNSAKLVVELAPMEIRTFL+DFTDK
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

XP_022987147.1 probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita maxima]8.3e-2491.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGE ALRGGPVNSAKLVVELAPMEIRTFL+DFTDK
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

XP_022987148.1 probable alpha-mannosidase At5g13980 isoform X3 [Cucurbita maxima]8.3e-2491.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGE ALRGGPVNSAKLVVELAPMEIRTFL+DFTDK
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

XP_023516222.1 probable alpha-mannosidase At5g13980 isoform X2 [Cucurbita pepo subsp. pepo]2.4e-2391.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGEKALRGGPVNSAKLVVELAPMEIRTFL+DFT K
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

TrEMBL top hitse value%identityAlignment
A0A6J1E1X4 Alpha-mannosidase1.2e-2391.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGEKALRGGPVNSAKLVVELAPMEIRTFL+DFT K
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

A0A6J1E5D1 Alpha-mannosidase1.2e-2391.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGEKALRGGPVNSAKLVVELAPMEIRTFL+DFT K
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

A0A6J1J9K1 Alpha-mannosidase4.0e-2491.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGE ALRGGPVNSAKLVVELAPMEIRTFL+DFTDK
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

A0A6J1JDB3 Alpha-mannosidase4.0e-2491.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGE ALRGGPVNSAKLVVELAPMEIRTFL+DFTDK
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

A0A6J1JIM1 Alpha-mannosidase4.0e-2491.04Show/hide
Query:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +T KVT TSLSANQERAEMEKKRLVWKVEGN KGE ALRGGPVNSAKLVVELAPMEIRTFL+DFTDK
Subjt:  ETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDK

SwissProt top hitse value%identityAlignment
C0HJB3 Alpha-mannosidase3.2e-1061.4Show/hide
Query:  SLSANQERAEMEKKRLVWKVEG-NPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDF
        SLSANQE++EM  K++ W VEG N +  +A+RGGPV++A  VVEL PMEIRTFL+ F
Subjt:  SLSANQERAEMEKKRLVWKVEG-NPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDF

P94078 Alpha-mannosidase At3g267201.6e-1456Show/hide
Query:  NFETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDKYSCPGE
        N +  +V  TSLS NQE+AEMEK+RL+WKVEG+  GE+  RG  V++ KLVVEL PMEIRT L+ F D+    G+
Subjt:  NFETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDKYSCPGE

Q8LPJ3 Probable alpha-mannosidase At5g139803.2e-1059.68Show/hide
Query:  KVTGTSLSANQERAEMEKKRLVWKVEGN---PKGEKALRGGPVNSAKLVVELAPMEIRTFLV
        K+T  SLSANQER+ MEKKRLVWKVEG     + +KA RG  ++  KL +EL PMEIRT L+
Subjt:  KVTGTSLSANQERAEMEKKRLVWKVEGN---PKGEKALRGGPVNSAKLVVELAPMEIRTFLV

Q9FKW9 Probable alpha-mannosidase At5g661508.4e-1156.92Show/hide
Query:  KVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKA-LRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +VT  SLSANQE+ +M K+++ WKVEG  +   + LRGGPV+ + LVVEL PMEIRTF+V F  K
Subjt:  KVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKA-LRGGPVNSAKLVVELAPMEIRTFLVDFTDK

Arabidopsis top hitse value%identityAlignment
AT3G26720.1 Glycosyl hydrolase family 38 protein1.2e-1556Show/hide
Query:  NFETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDKYSCPGE
        N +  +V  TSLS NQE+AEMEK+RL+WKVEG+  GE+  RG  V++ KLVVEL PMEIRT L+ F D+    G+
Subjt:  NFETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDKYSCPGE

AT5G13980.1 Glycosyl hydrolase family 38 protein2.3e-1159.68Show/hide
Query:  KVTGTSLSANQERAEMEKKRLVWKVEGN---PKGEKALRGGPVNSAKLVVELAPMEIRTFLV
        K+T  SLSANQER+ MEKKRLVWKVEG     + +KA RG  ++  KL +EL PMEIRT L+
Subjt:  KVTGTSLSANQERAEMEKKRLVWKVEGN---PKGEKALRGGPVNSAKLVVELAPMEIRTFLV

AT5G13980.2 Glycosyl hydrolase family 38 protein2.3e-1159.68Show/hide
Query:  KVTGTSLSANQERAEMEKKRLVWKVEGN---PKGEKALRGGPVNSAKLVVELAPMEIRTFLV
        K+T  SLSANQER+ MEKKRLVWKVEG     + +KA RG  ++  KL +EL PMEIRT L+
Subjt:  KVTGTSLSANQERAEMEKKRLVWKVEGN---PKGEKALRGGPVNSAKLVVELAPMEIRTFLV

AT5G66150.1 Glycosyl hydrolase family 38 protein5.9e-1256.92Show/hide
Query:  KVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKA-LRGGPVNSAKLVVELAPMEIRTFLVDFTDK
        +VT  SLSANQE+ +M K+++ WKVEG  +   + LRGGPV+ + LVVEL PMEIRTF+V F  K
Subjt:  KVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKA-LRGGPVNSAKLVVELAPMEIRTFLVDFTDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTTGAGACAAGCAAGGTAACGGGGACAAGTTTATCTGCTAACCAAGAAAGAGCAGAAATGGAGAAGAAGAGGTTGGTGTGGAAAGTAGAAGGGAATCCTAAAGG
AGAAAAGGCCTTGAGAGGAGGGCCTGTGAACTCAGCAAAGTTGGTGGTAGAACTTGCTCCTATGGAAATTCGAACCTTCCTGGTTGATTTTACGGACAAATATTCATGCC
CTGGTGAATGCGGAAAGTTTATTAACCAATATATAACATTCACAGTGTCTTCCTGGGCTGACAGTTCAACTGGTTTTGCCACAAACACAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTTGAGACAAGCAAGGTAACGGGGACAAGTTTATCTGCTAACCAAGAAAGAGCAGAAATGGAGAAGAAGAGGTTGGTGTGGAAAGTAGAAGGGAATCCTAAAGG
AGAAAAGGCCTTGAGAGGAGGGCCTGTGAACTCAGCAAAGTTGGTGGTAGAACTTGCTCCTATGGAAATTCGAACCTTCCTGGTTGATTTTACGGACAAATATTCATGCC
CTGGTGAATGCGGAAAGTTTATTAACCAATATATAACATTCACAGTGTCTTCCTGGGCTGACAGTTCAACTGGTTTTGCCACAAACACAAACTAG
Protein sequenceShow/hide protein sequence
MNFETSKVTGTSLSANQERAEMEKKRLVWKVEGNPKGEKALRGGPVNSAKLVVELAPMEIRTFLVDFTDKYSCPGECGKFINQYITFTVSSWADSSTGFATNTN