; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG07G003785 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G003785
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReverse transcriptase domain-containing protein
Genome locationCG_Chr07:4235049..4235336
RNA-Seq ExpressionClCG07G003785
SyntenyClCG07G003785
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_042950087.1 uncharacterized protein LOC122282202 [Carya illinoinensis]1.6e-1346.07Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWH
        MKILSWN  G+GNP++ R+L DLL    P I+FL ETK      +  K    F  CF V S+G  GGL L WK  ++LR+I    I  H
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWH

XP_042958050.1 uncharacterized protein LOC122293561 [Carya illinoinensis]4.2e-1441.11Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI
        M +L WN  G+GNP++ R LS L++ + P++VFL ETKC ++  + ++RS    GCF V+S+G  GG+ LLWK + +++V+      WH+
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI

XP_042961719.1 uncharacterized protein LOC122296220 [Carya illinoinensis]1.6e-1340Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI
        M +L WN  G+GNP++ R LS L++ + P++VFL E KC ++  + ++RS    GCF V+S+G  GG+ LLWK + +++V+      WH+
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI

XP_042962545.1 uncharacterized protein LOC122296814 [Carya illinoinensis]2.4e-1443.33Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI
        M +L WN  G+GNP++ R LS L++ + P++VFL ETKC ++  + I+R     GCF V+SIG  GG+ LLWK + D++V+      WH+
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI

XP_042964610.1 uncharacterized protein LOC122298825 [Carya illinoinensis]9.3e-1441.11Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI
        M +LSWN  G+GNP+A R L+ L++ + P +VFL ETKC +   + +K+   F  C  V S+GS GGL ++WK  +++++I      WHI
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI

TrEMBL top hitse value%identityAlignment
A0A2N9EC78 Uncharacterized protein6.5e-1340.24Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIK
        M+ L WN  GI N    RAL  L+++ HP I+FL ETK GE+  + +KR+  + G F V + G  GG+C+LW   ++L++++
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIK

A0A2N9HPX7 Ribonuclease H6.5e-1340.24Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIK
        M+ L WN  GI N    RAL  L+++ HP I+FL ETK GE+  + +KR+  + G F V + G  GG+C+LW   ++L++++
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIK

A0A2N9I9J4 Reverse transcriptase domain-containing protein6.5e-1340.24Show/hide
Query:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIK
        M+ L WN  GI N    RAL  L+++ HP I+FL ETK GE+  + +KR+  + G F V + G  GG+C+LW   ++L++++
Subjt:  MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIK

A0A5B6VDB0 BEACH domain-containing lvsC1.4e-1238.64Show/hide
Query:  ILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI
        ILSWN  G+G+P+A R L  L++ ++P +VFL ET+  ++  +++++S   L C  V++ G++GGLCL WK  +D+R+    +  WH+
Subjt:  ILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHI

A0A5C7HLY4 CCHC-type domain-containing protein1.9e-1246.15Show/hide
Query:  LSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVI
        LSWN  G+GNP+ F ALS LL+   P +VFLS+TK  +  TD+ +    + GCF V S G+ GGL LLWK  + + ++
Subjt:  LSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCCTCAGTTGGAATGCTGGGGGTATTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCATCCTGTGATTGTGTTTCTATCTGAGAC
AAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAGTGGGAATTTCCTTGGATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAG
CTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTTCTGGCATATATGGTTTCCCGCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCCTCAGTTGGAATGCTGGGGGTATTGGTAACCCTAAGGCATTCCGGGCATTGTCTGACCTTCTAAGGATCAGGCATCCTGTGATTGTGTTTCTATCTGAGAC
AAAGTGTGGTGAAGAGACTACGGATAGAATCAAGAGAAGTGGGAATTTCCTTGGATGCTTTGCGGTTAAAAGCATTGGTTCAAAAGGTGGCCTGTGTCTACTTTGGAAAG
CTAAGGTCGATTTGAGAGTAATCAAATCAATGGAGATTTTCTGGCATATATGGTTTCCCGCAAGGTGA
Protein sequenceShow/hide protein sequence
MKILSWNAGGIGNPKAFRALSDLLRIRHPVIVFLSETKCGEETTDRIKRSGNFLGCFAVKSIGSKGGLCLLWKAKVDLRVIKSMEIFWHIWFPAR