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ClCG07G004590 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G004590
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description60S acidic ribosomal protein P1-like
Genome locationCG_Chr07:5838511..5840738
RNA-Seq ExpressionClCG07G004590
SyntenyClCG07G004590
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597015.1 60S acidic ribosomal protein P1-2, partial [Cucurbita argyrosperma subsp. sororia]4.9e-2374.12Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V  ESYW+ LFAKLAEKRNIGDL +NVGAGGGA V  AVP   AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]3.4e-2481.25Show/hide
Query:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGA----TAAATPPPEEKKEEPKEESDNDMGFSLFD
        AN+  VESYWY LFAKLAEKRNIGDL LNVGAGGGA V  AVPAGGA     AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGA----TAAATPPPEEKKEEPKEESDNDMGFSLFD
XP_022144008.1 60S acidic ribosomal protein P1-like [Momordica charantia]2.0e-2480Show/hide
Query:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP----AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        AN+ GV+SYWY LFAKLAEKRNIGDL +NVGAGGGA V  AVP    AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP----AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
XP_022974253.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]3.8e-2374.12Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V  ESYW+ LFAKLAEKRNIGDL +NVGAGGGA V  AVP   AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.3e-2380Show/hide
Query:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP----AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        AN+  VESYW+ LFAKLAEKRNIGDL LNVGAGGGA V  AVP    AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP----AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
TrEMBL top hitse value%identityAlignment
A0A1S3AUG9 60S acidic ribosomal protein P1-like1.7e-2481.25Show/hide
Query:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGA----TAAATPPPEEKKEEPKEESDNDMGFSLFD
        AN+  VESYWY LFAKLAEKRNIGDL LNVGAGGGA V  AVPAGGA     AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGA----TAAATPPPEEKKEEPKEESDNDMGFSLFD
A0A5D3DB57 60S acidic ribosomal protein P1-like1.7e-2481.25Show/hide
Query:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGA----TAAATPPPEEKKEEPKEESDNDMGFSLFD
        AN+  VESYWY LFAKLAEKRNIGDL LNVGAGGGA V  AVPAGGA     AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGA----TAAATPPPEEKKEEPKEESDNDMGFSLFD
A0A6J1CS45 60S acidic ribosomal protein P1-like9.7e-2580Show/hide
Query:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP----AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        AN+ GV+SYWY LFAKLAEKRNIGDL +NVGAGGGA V  AVP    AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  ANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP----AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
A0A6J1GHG1 60S acidic ribosomal protein P1-like2.4e-2374.12Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V  ESYW+ LFAKLAEKRNIGDL +NVGAGGGA V  AVP   AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
A0A6J1ICK4 60S acidic ribosomal protein P1-like1.8e-2374.12Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V  ESYW+ LFAKLAEKRNIGDL +NVGAGGGA V  AVP   AGGA AAA PPPEEKKEEPKEESD+DMGFSLFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP---AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-21.1e-1759.3Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA---GGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA   GGGA V+ A P A G  AAA P  EEKK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA---GGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
P29763 60S acidic ribosomal protein P18.2e-1359.46Show/hide
Query:  VGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        V VE YW  LFAKL  K+++ DL  NVGAGGGA    A P AGGA AA   P +E+K+EP EE   DMGFSLFD
Subjt:  VGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
P52855 60S acidic ribosomal protein P12.4e-2066.27Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGAL-VTIAVPAGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  + VESYW  LFAKL EKRN+ DL L+VG+GGGA  V  A PAGGA AAA P  EEKKEE KEESD+DMGFSLFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGAL-VTIAVPAGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
Q8LCW9 60S acidic ribosomal protein P1-11.1e-1760Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA  GGGA V  A PA G  AAA P  EE KK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
Q8LEQ0 60S acidic ribosomal protein P1-33.2e-1759.3Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPA--GGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA  GGGA V  A PA  GGA AAA    E+KK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPA--GGATAAATPPPEEKKEEPKEESDNDMGFSLFD
Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family7.9e-1960Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA  GGGA V  A PA G  AAA P  EE KK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
AT1G01100.2 60S acidic ribosomal protein family7.9e-1960Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA  GGGA V  A PA G  AAA P  EE KK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
AT1G01100.4 60S acidic ribosomal protein family7.9e-1960Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA  GGGA V  A PA G  AAA P  EE KK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA--GGGALVTIAVPAGGATAAATPPPEE-KKEEPKEESDNDMGFSLFD
AT4G00810.1 60S acidic ribosomal protein family7.9e-1959.3Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA---GGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA   GGGA V+ A P A G  AAA P  EEKK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA---GGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
AT4G00810.2 60S acidic ribosomal protein family7.9e-1959.3Show/hide
Query:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA---GGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD
        +A  ++A  V +ESYW  LFAK+AEKRN+ DL +NVGA   GGGA V+ A P A G  AAA P  EEKK+EP EESD D+GF LFD
Subjt:  VANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGA---GGGALVTIAVP-AGGATAAATPPPEEKKEEPKEESDNDMGFSLFD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAGTTATGTGATGGGATGATTTTCAATCATGATCCACCAATGTGCGTTGATTGCTTGGTAAGTTCATCTCATGTTCCTGATTGTGGGGGACCTTCACAC
TGTGGGATGGGCTGTAGTGCACTTGTAGCAAACAAGATGGAAGCTAATTTGGTCGGTGTGGAGTCTTACTGGTACTATCTTTTTGCTAAGTTGGCTGAGAAGCGT
AACATTGGTGATTTATTCCTCAATGTTGGGGCTGGTGGTGGTGCCTTGGTCACCATTGCTGTCCCAGCTGGTGGAGCTACTGCTGCAGCTACTCCTCCACCTGAA
GAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACAATGATATGGGATTCAGTTTGTTCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAGTTATGTGATGGGATGATTTTCAATCATGATCCACCAATGTGCGTTGATTGCTTGGTAAGTTCATCTCATGTTCCTGATTGTGGGGGACCTTCACAC
TGTGGGATGGGCTGTAGTGCACTTGTAGCAAACAAGATGGAAGCTAATTTGGTCGGTGTGGAGTCTTACTGGTACTATCTTTTTGCTAAGTTGGCTGAGAAGCGT
AACATTGGTGATTTATTCCTCAATGTTGGGGCTGGTGGTGGTGCCTTGGTCACCATTGCTGTCCCAGCTGGTGGAGCTACTGCTGCAGCTACTCCTCCACCTGAA
GAGAAAAAGGAAGAACCTAAGGAAGAGAGTGACAATGATATGGGATTCAGTTTGTTCGATTAG
Protein sequenceShow/hide protein sequence
MEQLCDGMIFNHDPPMCVDCLVSSSHVPDCGGPSHCGMGCSALVANKMEANLVGVESYWYYLFAKLAEKRNIGDLFLNVGAGGGALVTIAVPAGGATAAATPPPE
EKKEEPKEESDNDMGFSLFD