; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG07G005105 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G005105
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome locationCG_Chr07:6841794..6860069
RNA-Seq ExpressionClCG07G005105
SyntenyClCG07G005105
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001516 - NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ALO21756.1 NdhF [Cucurbita argyrosperma]6.6e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

ALO22793.1 NdhF [Cucurbita pepo subsp. pepo]6.6e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

QWV60888.1 NADH-plastoquinone oxidoreductase subunit 5 [Cucurbita ficifolia]6.6e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

QZL38642.1 NADH dehydrogenase subunit F [Citrullus naudinianus]6.6e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

YP_009447583.1 NADH dehydrogenase subunit 5 [Cucurbita moschata]6.6e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

TrEMBL top hitse value%identityAlignment
A0A0S2IE76 NAD(P)H dehydrogenase subunit 53.2e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

A0A1P8LEA9 NAD(P)H dehydrogenase subunit 53.2e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

A0A1P8LET2 NAD(P)H dehydrogenase subunit 53.2e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

A0A515BLN2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic3.2e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

A0A7T3USK6 NADH-plastoquinone oxidoreductase subunit 53.2e-1581.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

SwissProt top hitse value%identityAlignment
A1XG02 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic1.2e-1680.36Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLV
        E GYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+S FN SMLGLV
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLV

A9LYE7 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.3e-1771.88Show/hide
Query:  DTVAQELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        +T + E GYLIDPLT I+ ILITTVGIM+LIYSDNYM  DQ YLRFF Y+S FN SMLGLV  S
Subjt:  DTVAQELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

Q0ZIX1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.3e-1777.97Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        E GYLIDPLT I+SILITTVGIM+LIYSDNYM  DQ YLRFF Y+S FN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic5.6e-1777.97Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        ELGY IDPLT I++ILITTVGIM+LIYSDNYM  DQ YLRFF Y+SLFN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

Q3V4Y7 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic7.3e-1771.88Show/hide
Query:  DTVAQELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        +T + E GYLIDPLT I+ ILITTVGIM+LIYSDNYM  DQ YLRFF Y+S FN SMLGLV  S
Subjt:  DTVAQELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS

Arabidopsis top hitse value%identityAlignment
ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein9.8e-1772.88Show/hide
Query:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS
        E GY IDPLT I+SILITTVGI++LIYSDNYM  DQ YLRFF Y+  FN SMLGLV  S
Subjt:  ELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVFGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATTGTCAATTTTACCATTTTTGCTCCTCGTGCTCTCCCTTCTCCATTCCTCCTGATGACACAATCCTATCAAGCTATTTGTCATCACCGTGCCTTATCGCAGA
TAAAGTCATTATTGGAAACTGCCTAAGACTGCTTGATACCGTTGCTCAAGAGTTGGGCTACTTGATTGATCCACTTACTTATATTCTGTCAATATTAATCACGACGGTTG
GAATTATGATTCTTATTTATAGTGACAATTATATGTGTCGTGATCAAAGATATTTGAGATTTTTTGTGTATATAAGTTTGTTCAATATGTCAATGTTGGGATTAGTTTTT
GGTTCACTGACGACCTACTGTGGTGAATGCTTGTTAAAAGGCATTTGTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATTGTCAATTTTACCATTTTTGCTCCTCGTGCTCTCCCTTCTCCATTCCTCCTGATGACACAATCCTATCAAGCTATTTGTCATCACCGTGCCTTATCGCAGA
TAAAGTCATTATTGGAAACTGCCTAAGACTGCTTGATACCGTTGCTCAAGAGTTGGGCTACTTGATTGATCCACTTACTTATATTCTGTCAATATTAATCACGACGGTTG
GAATTATGATTCTTATTTATAGTGACAATTATATGTGTCGTGATCAAAGATATTTGAGATTTTTTGTGTATATAAGTTTGTTCAATATGTCAATGTTGGGATTAGTTTTT
GGTTCACTGACGACCTACTGTGGTGAATGCTTGTTAAAAGGCATTTGTAACTAA
Protein sequenceShow/hide protein sequence
MFDCQFYHFCSSCSPFSIPPDDTILSSYLSSPCLIADKVIIGNCLRLLDTVAQELGYLIDPLTYILSILITTVGIMILIYSDNYMCRDQRYLRFFVYISLFNMSMLGLVF
GSLTTYCGECLLKGICN