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ClCG07G005180 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G005180
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationCG_Chr07:6993656..6997149
RNA-Seq ExpressionClCG07G005180
SyntenyClCG07G005180
Gene Ontology termsGO:0006313 - transposition, DNA-mediated (biological process)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004803 - transposase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.6e-1954.9Show/hide
Query:  DVWKMRKM---------VIR---KQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++   KQ   L++S   + +F MNDK PCR SDV++YM+ HHGV+VSYDKAW+GREI  NSIRGTLE SYA+LS+FS ALI+
Subjt:  DVWKMRKM---------VIR---KQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KN
         N
Subjt:  KN
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.1e-1850Show/hide
Query:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++  H      + S     +F MNDK PCR SDV++YM+ HHGV++SYDKAW+GREI  NSIRGT E SYA+LS+FS ALI+
Subjt:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.3e-1849.06Show/hide
Query:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++  H      + S     +F  NDK PCR SDV++YM+ HHGV++SYDKAW+GREI  NSIRGT E SYA+LS+FS ALI+
Subjt:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]2.0e-1749.06Show/hide
Query:  DVWKMRKMVI------------RKQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK +              KQ    ++S   + +F  NDKVPCR SDV++YM+ HH V++SYDKAW GREI  NSIRGT E SYA+LS+FS ALI+
Subjt:  DVWKMRKMVI------------RKQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]4.5e-1748.11Show/hide
Query:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++  H      + S     +F MNDK PCR SDV++YM+ HH V+VSYDKAW+GREI  NSIRGT + SY +LS+FS ALI+
Subjt:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958999.8e-1849.06Show/hide
Query:  DVWKMRKMVI------------RKQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK +              KQ    ++S   + +F  NDKVPCR SDV++YM+ HH V++SYDKAW GREI  NSIRGT E SYA+LS+FS ALI+
Subjt:  DVWKMRKMVI------------RKQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
A0A1S4E0D5 uncharacterized protein LOC1079912532.2e-1748.11Show/hide
Query:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++  H      + S     +F MNDK PCR SDV++YM+ HH V+VSYDKAW+GREI  NSIRGT + SY +LS+FS ALI+
Subjt:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like8.0e-2054.9Show/hide
Query:  DVWKMRKM---------VIR---KQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++   KQ   L++S   + +F MNDK PCR SDV++YM+ HHGV+VSYDKAW+GREI  NSIRGTLE SYA+LS+FS ALI+
Subjt:  DVWKMRKM---------VIR---KQHPGLLLS--VQSLFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KN
         N
Subjt:  KN
A0A5A7V1Z6 CCHC-type domain-containing protein5.2e-1950Show/hide
Query:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++  H      + S     +F MNDK PCR SDV++YM+ HHGV++SYDKAW+GREI  NSIRGT E SYA+LS+FS ALI+
Subjt:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
A0A5D3E198 MuDRA-like transposase2.6e-1849.06Show/hide
Query:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK
        D+W +RK          V++  H      + S     +F  NDK PCR SDV++YM+ HHGV++SYDKAW+GREI  NSIRGT E SYA+LS+FS ALI+
Subjt:  DVWKMRKM---------VIRKQHPGLLLSVQS-----LFTMNDKVPCRTSDVVSYMRRHHGVDVSYDKAWKGREIVFNSIRGTLELSYALLSSFSIALIK

Query:  KNHDNY
         N   Y
Subjt:  KNHDNY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATGGTTAAAGGTCGTAGTGGCTGCCGAAAGTGGCTGGAGGTGGCTACTAGAGTTTGTCGACACGATGGCTTGAGGTGGTTGTCGGAGTTGGTCGGTGACGGGGG
CAAGGTGGTGGCCATCAAAGATCTTTGTAAAGAGGCCAATCTTGAGGGCAGAGATGGTGGCAGTGAAGATGTGTGGAAAATGAGAAAGATGGTCATACGTAAGCAACATC
CTGGATTGTTGTTAAGTGTGCAAAGTCTTTTTACAATGAATGACAAGGTGCCATGTCGTACTTCTGATGTTGTTAGCTATATGAGAAGGCACCATGGTGTAGATGTAAGT
TATGACAAGGCTTGGAAAGGCCGTGAGATTGTTTTCAATTCTATTAGAGGTACTCTCGAGTTGTCATATGCTCTGTTGTCATCATTCTCAATTGCATTGATTAAAAAGAA
TCATGATAATTATTGTCGAAGGTGGTCGTCAATGTTAATGGCCGAAAGTCGTAGTGGCTACCAGAGGTGGTTGGAGGTGGTTGCTAGAGTTTGTTGGCGTGATGGCTTGA
GGTGGTTGTCGGAGTTGGTCGGCGACGGGAGCAGGGTGGTGGCCATCGAAGATCTTTGTAAAGAGGAGGATGACCTTTGTGGGGAGGCCAACCTTGAGGGCAACGATGGT
GGCAGTGAAGATGTGTGGAAAGTGGGAAAGCTGACATTGGAATGGGGT
mRNA sequenceShow/hide mRNA sequence
ATGGTAATGGTTAAAGGTCGTAGTGGCTGCCGAAAGTGGCTGGAGGTGGCTACTAGAGTTTGTCGACACGATGGCTTGAGGTGGTTGTCGGAGTTGGTCGGTGACGGGGG
CAAGGTGGTGGCCATCAAAGATCTTTGTAAAGAGGCCAATCTTGAGGGCAGAGATGGTGGCAGTGAAGATGTGTGGAAAATGAGAAAGATGGTCATACGTAAGCAACATC
CTGGATTGTTGTTAAGTGTGCAAAGTCTTTTTACAATGAATGACAAGGTGCCATGTCGTACTTCTGATGTTGTTAGCTATATGAGAAGGCACCATGGTGTAGATGTAAGT
TATGACAAGGCTTGGAAAGGCCGTGAGATTGTTTTCAATTCTATTAGAGGTACTCTCGAGTTGTCATATGCTCTGTTGTCATCATTCTCAATTGCATTGATTAAAAAGAA
TCATGATAATTATTGTCGAAGGTGGTCGTCAATGTTAATGGCCGAAAGTCGTAGTGGCTACCAGAGGTGGTTGGAGGTGGTTGCTAGAGTTTGTTGGCGTGATGGCTTGA
GGTGGTTGTCGGAGTTGGTCGGCGACGGGAGCAGGGTGGTGGCCATCGAAGATCTTTGTAAAGAGGAGGATGACCTTTGTGGGGAGGCCAACCTTGAGGGCAACGATGGT
GGCAGTGAAGATGTGTGGAAAGTGGGAAAGCTGACATTGGAATGGGGT
Protein sequenceShow/hide protein sequence
MVMVKGRSGCRKWLEVATRVCRHDGLRWLSELVGDGGKVVAIKDLCKEANLEGRDGGSEDVWKMRKMVIRKQHPGLLLSVQSLFTMNDKVPCRTSDVVSYMRRHHGVDVS
YDKAWKGREIVFNSIRGTLELSYALLSSFSIALIKKNHDNYCRRWSSMLMAESRSGYQRWLEVVARVCWRDGLRWLSELVGDGSRVVAIEDLCKEEDDLCGEANLEGNDG
GSEDVWKVGKLTLEWG