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ClCG07G005500 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G005500
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr07:7937553..7986013
RNA-Seq ExpressionClCG07G005500
SyntenyClCG07G005500
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600849.1 S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]6.5e-3657.98Show/hide
Query:  PTVGSA--VRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPE
        PT G++   +Q  RSL+D+ KFHVEIRN ++MYILDSHC SKD+DLGLHIL P ++Q WSFR N W  TLFHC L+WERG +EF AF+ D+ FF  +C  
Subjt:  PTVGSA--VRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPE

Query:  RECVWLAEQGGLSMVNRAG
          C+W+A+Q G+ M+N+AG
Subjt:  RECVWLAEQGGLSMVNRAG

KAG7031483.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3855.8Show/hide
Query:  MHQLMLLSLGFLLIAFRPTVGSA----VRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGS
        M +L+LL LG LL+   PT G++     +Q  RSL+D+ KFHVEIRN ++MYILDSHC SKD+DLGLHIL P ++Q WSFR N W  TLFHC L+WERG 
Subjt:  MHQLMLLSLGFLLIAFRPTVGSA----VRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGS

Query:  REFKAFYFDDAFFSVFCPERECVWLAEQGGLSMVNRAG
        +EF AF+ D+ FF  +C    C+W+A+Q G+ M+N+AG
Subjt:  REFKAFYFDDAFFSVFCPERECVWLAEQGGLSMVNRAG

KGN51432.1 hypothetical protein Csa_007732 [Cucumis sativus]2.3e-2547.01Show/hide
Query:  HQLMLLSLGFLLIAFRPTVGSAVRQPNR-SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFK
        H L+LL   FL++ F  ++      P + S+I L  + +EI N +EMY+LDSHC SKDNDLGLHIL PGE Q WSF+ N +ETT F C L+WE G  EF 
Subjt:  HQLMLLSLGFLLIAFRPTVGSAVRQPNR-SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFK

Query:  AFYFDDAFFSVFCPERECVWLAEQGGLSMVNRAG
        +F  +  F + FC    C W A Q G+ + N  G
Subjt:  AFYFDDAFFSVFCPERECVWLAEQGGLSMVNRAG

XP_008453057.1 PREDICTED: uncharacterized protein LOC103493879, partial [Cucumis melo]2.0e-2454.9Show/hide
Query:  SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSM
        S+I L+ + V+I N +EMY+LDSHC SKDNDLGLHIL PGE+Q WSF  NI+ETT F C L+WE G  EF +F  D  F + FC    C W A+Q G+ +
Subjt:  SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSM

Query:  VN
         N
Subjt:  VN

XP_023546939.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]7.2e-3560.91Show/hide
Query:  RQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQ
        +Q  RSLID+ KF VEIRN ++MYILDSHC SKD+DLGLHIL P ++Q WSFR NIW  TLFHC L+WERG +EF AF+ D+ FF  +C    C+W+A+Q
Subjt:  RQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQ

Query:  GGLSMVNRAG
         G+ M+N+AG
Subjt:  GGLSMVNRAG

TrEMBL top hitse value%identityAlignment
A0A0A0KL79 S-protein homolog3.1e-2350Show/hide
Query:  PNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG
        PN  ++  ++F VEI N + M+ILDSHC SKD+DLGLHIL P EKQ WSF+ N   TT FHC L+WE G  EF +F     F + +C  + C+W A Q G
Subjt:  PNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG

Query:  LSMVNRAG
        + + N AG
Subjt:  LSMVNRAG

A0A0A0KSN2 S-protein homolog1.1e-2547.01Show/hide
Query:  HQLMLLSLGFLLIAFRPTVGSAVRQPNR-SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFK
        H L+LL   FL++ F  ++      P + S+I L  + +EI N +EMY+LDSHC SKDNDLGLHIL PGE Q WSF+ N +ETT F C L+WE G  EF 
Subjt:  HQLMLLSLGFLLIAFRPTVGSAVRQPNR-SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFK

Query:  AFYFDDAFFSVFCPERECVWLAEQGGLSMVNRAG
        +F  +  F + FC    C W A Q G+ + N  G
Subjt:  AFYFDDAFFSVFCPERECVWLAEQGGLSMVNRAG

A0A1S3BUQ9 S-protein homolog4.0e-2345.61Show/hide
Query:  GSAVRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVW
        G  + +P+  L+   KF++ I N ++MY+LDSHC SKD+DLG  +L P ++Q WSFR N   TT FHC L+WE G  EF AF  D  F + FC +  C W
Subjt:  GSAVRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVW

Query:  LAEQGGLSMVNRAG
         A Q G+ + N+ G
Subjt:  LAEQGGLSMVNRAG

A0A1S3BVC0 S-protein homolog9.5e-2554.9Show/hide
Query:  SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSM
        S+I L+ + V+I N +EMY+LDSHC SKDNDLGLHIL PGE+Q WSF  NI+ETT F C L+WE G  EF +F  D  F + FC    C W A+Q G+ +
Subjt:  SLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSM

Query:  VN
         N
Subjt:  VN

A0A6J1FMU2 S-protein homolog3.1e-2350Show/hide
Query:  PNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG
        PN+  I L+KF V IRN + MY+LDSHC SKD+DLG+ ++ P ++QRWSFR N   +T FHC L+W  G  EF AF  D  F + FC +  CVW A+Q G
Subjt:  PNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG

Query:  LSMVNRAG
        L + ++ G
Subjt:  LSMVNRAG

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 183.0e-0739.24Show/hide
Query:  LDSHCRSKDNDLGLHILLPGEKQRWSFRT--NIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG
        L  HC+SK  DLG   L P   Q W F    N+WETTLF C   WE  SR F      +   ++ C    CVW     G
Subjt:  LDSHCRSKDNDLGLHILLPGEKQRWSFRT--NIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG

F4JLQ5 S-protein homolog 28.6e-0733.33Show/hide
Query:  SLIDLKKFHVEIRN-MMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFY-FDDAFFSVFCPERECVWLAEQGG
        S+    K  VEI N +     L  HC+SKD+DLG   L PGE   +SF    +  TL+ C+  W   S  F  +    D+     C    CVW   + G
Subjt:  SLIDLKKFHVEIRN-MMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFY-FDDAFFSVFCPERECVWLAEQGG

O23020 S-protein homolog 51.5e-0634.78Show/hide
Query:  VEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDA
        V + N++    L  HC+SK +DLG+H++   ++  + F+ N+W++TLF C+ +W+    +FK+F   DA
Subjt:  VEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDA

Q2HQ46 S-protein homolog 747.8e-0837.04Show/hide
Query:  HCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSMVNRA
        HC+SK+NDLG   L   ++  W+F  N+  +TLF C +  + G    K F+ DD      C  + CVW A+  GL + N A
Subjt:  HCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSMVNRA

Q9FMQ4 S-protein homolog 31.9e-0647.37Show/hide
Query:  LDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDD
        L+ HC+S D+DLGL IL P     + FRT+I  TTLF+C   W   S+ F   Y DD
Subjt:  LDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDD

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.0e-0734.78Show/hide
Query:  VEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDA
        V + N++    L  HC+SK +DLG+H++   ++  + F+ N+W++TLF C+ +W+    +FK+F   DA
Subjt:  VEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDA

AT4G16195.1 Plant self-incompatibility protein S1 family6.1e-0833.33Show/hide
Query:  SLIDLKKFHVEIRN-MMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFY-FDDAFFSVFCPERECVWLAEQGG
        S+    K  VEI N +     L  HC+SKD+DLG   L PGE   +SF    +  TL+ C+  W   S  F  +    D+     C    CVW   + G
Subjt:  SLIDLKKFHVEIRN-MMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFY-FDDAFFSVFCPERECVWLAEQGG

AT4G24973.1 Plant self-incompatibility protein S1 family2.1e-0839.24Show/hide
Query:  LDSHCRSKDNDLGLHILLPGEKQRWSFRT--NIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG
        L  HC+SK  DLG   L P   Q W F    N+WETTLF C   WE  SR F      +   ++ C    CVW     G
Subjt:  LDSHCRSKDNDLGLHILLPGEKQRWSFRT--NIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGG

AT4G29035.1 Plant self-incompatibility protein S1 family5.5e-0937.04Show/hide
Query:  HCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSMVNRA
        HC+SK+NDLG   L   ++  W+F  N+  +TLF C +  + G    K F+ DD      C  + CVW A+  GL + N A
Subjt:  HCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSVFCPERECVWLAEQGGLSMVNRA

AT5G04350.1 Plant self-incompatibility protein S1 family5.5e-0930.17Show/hide
Query:  LIAFRPTVGSAVRQPNRSLIDLKKFHVEIRNMME-MYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSV
        L  F   +G  +   N +  ++ +  V + N +E   +L  HCRSKD+DLG HIL  G+   ++F  NIW+TT F C +      +    F   +  +S 
Subjt:  LIAFRPTVGSAVRQPNRSLIDLKKFHVEIRNMME-MYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFDDAFFSV

Query:  FCPERECVWLAEQGGL
           E  C W+  + G+
Subjt:  FCPERECVWLAEQGGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCAACTCATGTTATTATCATTAGGCTTCTTACTTATCGCGTTTCGACCAACAGTTGGAAGTGCAGTAAGACAACCGAATAGATCTCTTATTGATCTAAAG
AAATTTCATGTAGAAATTCGTAACATGATGGAAATGTATATATTGGATAGCCATTGTCGGTCAAAAGACAACGATTTAGGGTTACATATACTTCTTCCAGGTGAA
AAACAACGTTGGTCATTCAGAACGAATATTTGGGAAACAACCTTATTCCATTGCACATTGAAATGGGAAAGAGGGTCTAGGGAGTTTAAAGCATTTTATTTTGAT
GATGCTTTCTTTAGTGTGTTCTGTCCCGAAAGAGAATGTGTTTGGTTAGCCGAACAAGGTGGACTTTCTATGGTGAATAGAGCTGGTATATGTATTTTAGGGTTG
GTAAACTTTCAAGTATTGAAGGAAGAAGTGAACGAAGCTAGAAGTATTTTAGCTCTTGATTATCGATCTTTCTCACCTCCACACATTGAAATTGGAGATCTCAAC
ATTGAGTTGAGGGAAGACTCACCGTTGGCTCCTGAGCATAGTGAAGTGTCTATTCTCCCACCTACTGAAGAAGAAAATTTGAGGGAGCCGACACCACCACCTCCT
CCGCCTGCAGTTGAACAAAATTTGTCTTCAAACGTTGTGGAGTCAATGCACCAAAACTCCTCACCGCCATCGCCCATTGAAATTGAAAAGGAAAAGACTTTAGAC
CCTGTGGAGTCATCAAATCAACCTATCATCCTGCCGCCACCTACTATTAATGACCCAATTGGCCAAGGCCCCAGCACTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATCAACTCATGTTATTATCATTAGGCTTCTTACTTATCGCGTTTCGACCAACAGTTGGAAGTGCAGTAAGACAACCGAATAGATCTCTTATTGATCTAAAG
AAATTTCATGTAGAAATTCGTAACATGATGGAAATGTATATATTGGATAGCCATTGTCGGTCAAAAGACAACGATTTAGGGTTACATATACTTCTTCCAGGTGAA
AAACAACGTTGGTCATTCAGAACGAATATTTGGGAAACAACCTTATTCCATTGCACATTGAAATGGGAAAGAGGGTCTAGGGAGTTTAAAGCATTTTATTTTGAT
GATGCTTTCTTTAGTGTGTTCTGTCCCGAAAGAGAATGTGTTTGGTTAGCCGAACAAGGTGGACTTTCTATGGTGAATAGAGCTGGTATATGTATTTTAGGGTTG
GTAAACTTTCAAGTATTGAAGGAAGAAGTGAACGAAGCTAGAAGTATTTTAGCTCTTGATTATCGATCTTTCTCACCTCCACACATTGAAATTGGAGATCTCAAC
ATTGAGTTGAGGGAAGACTCACCGTTGGCTCCTGAGCATAGTGAAGTGTCTATTCTCCCACCTACTGAAGAAGAAAATTTGAGGGAGCCGACACCACCACCTCCT
CCGCCTGCAGTTGAACAAAATTTGTCTTCAAACGTTGTGGAGTCAATGCACCAAAACTCCTCACCGCCATCGCCCATTGAAATTGAAAAGGAAAAGACTTTAGAC
CCTGTGGAGTCATCAAATCAACCTATCATCCTGCCGCCACCTACTATTAATGACCCAATTGGCCAAGGCCCCAGCACTTTATAA
Protein sequenceShow/hide protein sequence
MHQLMLLSLGFLLIAFRPTVGSAVRQPNRSLIDLKKFHVEIRNMMEMYILDSHCRSKDNDLGLHILLPGEKQRWSFRTNIWETTLFHCTLKWERGSREFKAFYFD
DAFFSVFCPERECVWLAEQGGLSMVNRAGICILGLVNFQVLKEEVNEARSILALDYRSFSPPHIEIGDLNIELREDSPLAPEHSEVSILPPTEEENLREPTPPPP
PPAVEQNLSSNVVESMHQNSSPPSPIEIEKEKTLDPVESSNQPIILPPPTINDPIGQGPSTL