; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG07G007130 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G007130
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCG_Chr07:14666117..14667957
RNA-Seq ExpressionClCG07G007130
SyntenyClCG07G007130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034016.1 hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa]1.3e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ++T SEG+WL+ERN + H TF ++ A  +DE++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.2e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN + H TF ++ A  +D+++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.0e-0746.03Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN K H TF ++ A  +D+++ E
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

KAA0058103.1 hypothetical protein E6C27_scaffold274G004110 [Cucumis melo var. makuwa]2.2e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN + H TF ++ A  +D+++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.2e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN + H TF ++ A  +D+++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

TrEMBL top hitse value%identityAlignment
A0A5A7SVM5 DUF4283 domain-containing protein6.4e-0742.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ++T SEG+WL+ERN + H TF ++ A  +DE++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein1.1e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN + H TF ++ A  +D+++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

A0A5A7UQG0 DUF4283 domain-containing protein1.1e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN + H TF ++ A  +D+++ +
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

A0A5D3C5P2 LINE-1 retrotransposable element ORF2 protein1.1e-0642.86Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        K++ NY+G +   + I D +G N+F VQ+VT  EG+WL+ERN K H TF ++ A  +D+++ E
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein9.8e-0846.03Show/hide
Query:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE
        KI+ NY+G +   + I D++G N+F+VQ+VT SEG+WL+ERN K H TF ++ A  +D+++ E
Subjt:  KIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATTTCGATACATGCAACTCTAAAGCTATTGGCCAAGCTATGGAGGATGGACAAAATTCAAAGATAAAAAACAACTACAATGGGCTCATTTCAATGACAATTTA
CATTAGTGATAAAAAGGGGAATAATAGATTCTTGGTTCAAATAGTCACAATGTCGGAAGGAAGATGGTTGGTTGAAAGAAACTCTAAGAGACACAGTACTTTTTCCAAAA
AAGTAGCCATGGACTACGATGAATATGACACTGAAATGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATTTCGATACATGCAACTCTAAAGCTATTGGCCAAGCTATGGAGGATGGACAAAATTCAAAGATAAAAAACAACTACAATGGGCTCATTTCAATGACAATTTA
CATTAGTGATAAAAAGGGGAATAATAGATTCTTGGTTCAAATAGTCACAATGTCGGAAGGAAGATGGTTGGTTGAAAGAAACTCTAAGAGACACAGTACTTTTTCCAAAA
AAGTAGCCATGGACTACGATGAATATGACACTGAAATGAAATAA
Protein sequenceShow/hide protein sequence
MDDFDTCNSKAIGQAMEDGQNSKIKNNYNGLISMTIYISDKKGNNRFLVQIVTMSEGRWLVERNSKRHSTFSKKVAMDYDEYDTEMK