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ClCG07G007720 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G007720
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCG_Chr07:20474587..20476554
RNA-Seq ExpressionClCG07G007720
SyntenyClCG07G007720
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033502.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.6e-1244.05Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKLII
        M + K+E+EKF G  D+T W++++TTI  + K LK L+DPK LP TLT  E++ +EE+ Y TL++NI++ +L Q    E  ++I
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKLII

KAA0042267.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.8e-1452.44Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL
        M ++K+E+EKF G  D TLW+K++TTIL + KALK L DPK LP TLT  E++ ME + Y TL++NI++ VL Q+  L+E L
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL

KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.5e-1354.05Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ
        M + K+E+EKF G  D+TLW+K++T IL + KALK L+DPK LP TLT  E++ +EE+ Y+TLI+NI++ VL Q
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ

KAA0054988.1 hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa]3.0e-1150Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ
        M + K+E+E F G  D+T W+K++T IL + KALK  +DPK LP TLT  E++ +EE+ Y TLI+NI++ VL Q
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ

TYK14225.1 putative polyprotein [Cucumis melo var. makuwa]3.8e-1452.44Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL
        M ++K+E+EKF G  D TLW+K++TTIL + KALK L DPK LP TLT  E++ ME + Y TL++NI++ VL Q+  L+E L
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL

TrEMBL top hitse value%identityAlignment
A0A5A7TKQ1 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-1452.44Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL
        M ++K+E+EKF G  D TLW+K++TTIL + KALK L DPK LP TLT  E++ ME + Y TL++NI++ VL Q+  L+E L
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL

A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.2e-1354.05Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ
        M + K+E+EKF G  D+TLW+K++T IL + KALK L+DPK LP TLT  E++ +EE+ Y+TLI+NI++ VL Q
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ

A0A5A7UJ23 Integrase catalytic domain-containing protein1.5e-1150Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ
        M + K+E+E F G  D+T W+K++T IL + KALK  +DPK LP TLT  E++ +EE+ Y TLI+NI++ VL Q
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQ

A0A5D3CRK9 Putative polyprotein1.8e-1452.44Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL
        M ++K+E+EKF G  D TLW+K++TTIL + KALK L DPK LP TLT  E++ ME + Y TL++NI++ VL Q+  L+E L
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKL

A0A5D3DST2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-1244.05Show/hide
Query:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKLII
        M + K+E+EKF G  D+T W++++TTI  + K LK L+DPK LP TLT  E++ +EE+ Y TL++NI++ +L Q    E  ++I
Subjt:  MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKLII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGTAAAGTATGAATTAGAGAAATTCAGTGGAGCAAATGACTATACCTTATGGTCAAAGAAGGTTACAACAATTCTGACAACATGGAAAGCTTTAAAAGTCCT
TGATGATCCCAAAAATTTGCCTATTACTCTGACTATTGAGGAGAAACAGAACATGGAAGAAATTCCATATACAACCCTTATCTTGAACATCTCGAACATAGTTCTAGGAC
AATCACCCGCGTTGGAGGAGAAGTTGATCATTGGCGGGGGAAGAAACGTACTTGGCTTACCATGTGTTGGTAAGGTTGTCATGCGTTATGGTCCCTATGCGTCGAAGACA
GAGTGGTCCCTATGCGTGGAAGACAGTGGTGTAGTTGGTCGTTTGGGGATGATTGAGTTGTATGCGTCGAAGGTAGGAGGCGTTGAGGGCGCCATTAAGAATGAGAACCT
TGCGCGCCAGCCTGCTTTTAAGGACGAACAACAAGGGAAGGTAGAAGAAGGTTTTCTTGTGGATTTTGGGTGGAATCCTACTCGCTTTGGTACTGGACAATGTCTGATGT
TTGGAGTAGAACGAATCAAGGAGATCGAGTCCAGGGATGAAATTTTAAGAAGAATCGAAGTTAGAGCAGTCAGCTTTGTTAAGGAGGAGAGTAAGCTAGAAACGTTTGTG
TTGCAGAGAGCTTGCGTTGCACACAAATTCTTCTTGAAATCAAGGTATAACAAAAAGGTTAAGGAGCATCTTTGTAGCAATAGCGTTAGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAGTAAAGTATGAATTAGAGAAATTCAGTGGAGCAAATGACTATACCTTATGGTCAAAGAAGGTTACAACAATTCTGACAACATGGAAAGCTTTAAAAGTCCT
TGATGATCCCAAAAATTTGCCTATTACTCTGACTATTGAGGAGAAACAGAACATGGAAGAAATTCCATATACAACCCTTATCTTGAACATCTCGAACATAGTTCTAGGAC
AATCACCCGCGTTGGAGGAGAAGTTGATCATTGGCGGGGGAAGAAACGTACTTGGCTTACCATGTGTTGGTAAGGTTGTCATGCGTTATGGTCCCTATGCGTCGAAGACA
GAGTGGTCCCTATGCGTGGAAGACAGTGGTGTAGTTGGTCGTTTGGGGATGATTGAGTTGTATGCGTCGAAGGTAGGAGGCGTTGAGGGCGCCATTAAGAATGAGAACCT
TGCGCGCCAGCCTGCTTTTAAGGACGAACAACAAGGGAAGGTAGAAGAAGGTTTTCTTGTGGATTTTGGGTGGAATCCTACTCGCTTTGGTACTGGACAATGTCTGATGT
TTGGAGTAGAACGAATCAAGGAGATCGAGTCCAGGGATGAAATTTTAAGAAGAATCGAAGTTAGAGCAGTCAGCTTTGTTAAGGAGGAGAGTAAGCTAGAAACGTTTGTG
TTGCAGAGAGCTTGCGTTGCACACAAATTCTTCTTGAAATCAAGGTATAACAAAAAGGTTAAGGAGCATCTTTGTAGCAATAGCGTTAGTGTTTAA
Protein sequenceShow/hide protein sequence
MASVKYELEKFSGANDYTLWSKKVTTILTTWKALKVLDDPKNLPITLTIEEKQNMEEIPYTTLILNISNIVLGQSPALEEKLIIGGGRNVLGLPCVGKVVMRYGPYASKT
EWSLCVEDSGVVGRLGMIELYASKVGGVEGAIKNENLARQPAFKDEQQGKVEEGFLVDFGWNPTRFGTGQCLMFGVERIKEIESRDEILRRIEVRAVSFVKEESKLETFV
LQRACVAHKFFLKSRYNKKVKEHLCSNSVSV