CuGenDBv2

Gene ID	ClCG07G008090
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Genome location	CG_Chr07:21581591..21589892
RNA-Seq Expression	ClCG07G008090
Synteny	ClCG07G008090
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004146523.1 uncharacterized protein LOC101210623 [Cucumis sativus]

1.6e-52

66.5

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Query:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSS  SIETE QIP TSPNSTT S+IEDCTKTQS     +I KAIEVVEKDSLA+AESFTSLFASLR VLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN
                                  VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLKVLRKNVDELDLAVN
Subjt:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN

Query:  KLLNFP
        KLLNFP
Subjt:  KLLNFP

XP_008452025.1 PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo]

1.1e-51

66.02

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Query:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSS  SIETE QIP TSPNSTT S +EDCTKTQS     +I +AIEVVEKDSLAIAESFTSLFASLR VLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN
                                  VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLKVLRKNVDELDLAVN
Subjt:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN

Query:  KLLNFP
        KLLNFP
Subjt:  KLLNFP

XP_022931514.1 uncharacterized protein LOC111437668 [Cucurbita moschata]

9.9e-50

61.9

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Query:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR
        MEQSP+DSS+SIE   QIP TSPNS      TCS++EDCT+ +S     EIFKAI+VVEKDSLAIAESFTSLFASLR  LSEVTSNSIDHMHCFNDAAGR
Subjt:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR

Query:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD
        LQES                          VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLK+LRKNVDELD
Subjt:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD

Query:  LAVNKLLNFP
        LAVNKLLNFP
Subjt:  LAVNKLLNFP

XP_022984532.1 uncharacterized protein LOC111482798 [Cucurbita maxima]

9.9e-50

61.9

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Query:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR
        MEQSP+DSS+SIE  SQIP TSPNS      TCS++EDCT+ +S     EIFKAI+VVEK+SLAIAESFTSLFASLR  LSEVTSNSIDHMHCFNDAAGR
Subjt:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR

Query:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD
        LQES                          VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLK+LRKNVDELD
Subjt:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD

Query:  LAVNKLLNFP
        LAVNKLLNFP
Subjt:  LAVNKLLNFP

XP_038878050.1 uncharacterized protein LOC120070236 [Benincasa hispida]

5.4e-56

69.5

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Query:  MEQSPADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFY
        MEQS ADSS SIE  SQI GTSPNS TCS+IEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES      
Subjt:  MEQSPADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFY

Query:  YIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVNKLLNFP
                            VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLKVLRKNVDELDLAVNKLLNFP
Subjt:  YIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVNKLLNFP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWT2 Uncharacterized protein

7.9e-53

66.5

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Query:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSS  SIETE QIP TSPNSTT S+IEDCTKTQS     +I KAIEVVEKDSLA+AESFTSLFASLR VLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN
                                  VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLKVLRKNVDELDLAVN
Subjt:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN

Query:  KLLNFP
        KLLNFP
Subjt:  KLLNFP

A0A1S3BTP0 uncharacterized protein LOC103493156

5.1e-52

66.02

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Query:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES
        MEQSPADSS  SIETE QIP TSPNSTT S +EDCTKTQS     +I +AIEVVEKDSLAIAESFTSLFASLR VLSEVTSNSIDHMHCFNDAAGRLQES
Subjt:  MEQSPADSS-ASIETESQIPGTSPNSTTCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQES

Query:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN
                                  VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLKVLRKNVDELDLAVN
Subjt:  GCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVN

Query:  KLLNFP
        KLLNFP
Subjt:  KLLNFP

A0A6J1C7Z8 uncharacterized protein LOC111008257 isoform X2

2.2e-42

57.62

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Query:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKT-----QSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR
        M+Q+ AD S  I  +SQIPGTSPNST     TCS++ED TK+     Q+EIFKAIEVVEKDSLAIAESFTSLFASLR  LSE + NSIDHMHCF+DAAG 
Subjt:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKT-----QSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR

Query:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD
        LQES                          VLDAATKGNRYINSSL                           RLNQEMKG+D+LAAQLKVLRKNVD LD
Subjt:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD

Query:  LAVNKLLNFP
         AVNKLL+FP
Subjt:  LAVNKLLNFP

A0A6J1EUG1 uncharacterized protein LOC111437668

4.8e-50

61.9

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Query:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR
        MEQSP+DSS+SIE   QIP TSPNS      TCS++EDCT+ +S     EIFKAI+VVEKDSLAIAESFTSLFASLR  LSEVTSNSIDHMHCFNDAAGR
Subjt:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR

Query:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD
        LQES                          VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLK+LRKNVDELD
Subjt:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD

Query:  LAVNKLLNFP
        LAVNKLLNFP
Subjt:  LAVNKLLNFP

A0A6J1J2E9 uncharacterized protein LOC111482798

4.8e-50

61.9

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Query:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR
        MEQSP+DSS+SIE  SQIP TSPNS      TCS++EDCT+ +S     EIFKAI+VVEK+SLAIAESFTSLFASLR  LSEVTSNSIDHMHCFNDAAGR
Subjt:  MEQSPADSSASIETESQIPGTSPNST-----TCSLIEDCTKTQS-----EIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGR

Query:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD
        LQES                          VLDAATKGNRYINSSL                           RLNQEMKGMD+LAAQLK+LRKNVDELD
Subjt:  LQESGCTKFYYIALVRLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELD

Query:  LAVNKLLNFP
        LAVNKLLNFP
Subjt:  LAVNKLLNFP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G23330.1 BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1)

2.5e-19

45.27

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Query:  ADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFYYIALV
        ADS+A I  E    G S         E  +  Q EI K +  VEKDS AIAESF+SLF SLR  LSE T +S+DHM CF +AAGRLQE+           
Subjt:  ADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFYYIALV

Query:  RLCSFVISSITKVILVLDAATKGNRYINSSLR-YASMSSGISIVLRKL
                        LDAATKGNRYINS LR + +  S I I++ KL
Subjt:  RLCSFVISSITKVILVLDAATKGNRYINSSLR-YASMSSGISIVLRKL

AT4G23330.2 unknown protein

5.1e-28

44.62

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Query:  ADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFYYIALV
        ADS+A I  E    G S         E  +  Q EI K +  VEKDS AIAESF+SLF SLR  LSE T +S+DHM CF +AAGRLQE+           
Subjt:  ADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFYYIALV

Query:  RLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVNKLLNFP
                        LDAATKGNRYINS L                           RLN+E+KG+++LAA+LK LRKNVD LD AVNKLL  P
Subjt:  RLCSFVISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVNKLLNFP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGCAATCTCCAGCGGATTCTTCCGCGAGCATCGAAACTGAAAGTCAGATTCCGGGGACATCCCCAAATTCGACCACTTGTTCTCTCATTGAAGATTGCACCAAAAC
CCAATCCGAGATTTTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATTGCTGAGAGCTTCACTTCTCTCTTTGCTTCCCTCCGTTTGGTTCTCTCCGAGGTCA
CCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGGGTGCACAAAATTTTATTACATAGCTTTAGTCAGATTGTGTTCTTTT
GTGATTTCTAGCATAACAAAGGTTATTCTAGTGCTTGATGCGGCAACGAAAGGCAATCGATACATTAATTCTTCCTTGAGGTATGCTTCAATGTCTTCTGGTATCTCCAT
TGTTCTACGGAAATTGGAAAATAGTCAATGTCCTTTGTTTTATATTTTCAGATTGAATCAGGAAATGAAAGGCATGGACAGTCTAGCTGCTCAGCTAAAGGTTTTGAGGA
AGAATGTGGATGAACTAGACTTGGCTGTGAACAAGCTGCTAAATTTTCCATGA

mRNA sequence

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AGAAACTCAAATCTATTATCTAGCTGCGAATAAATTACTCGTTTTGATGGGTGTGTTGAATTTCAATGGCCTGATCCTATTTGGGAAGTCCAAAGAAACCCAATTTTGGA
ATTGCAGAGAATTTGAAAACTCATCGAGAAATGGAGCAATCTCCAGCGGATTCTTCCGCGAGCATCGAAACTGAAAGTCAGATTCCGGGGACATCCCCAAATTCGACCAC
TTGTTCTCTCATTGAAGATTGCACCAAAACCCAATCCGAGATTTTCAAAGCCATTGAAGTCGTTGAGAAGGACTCTCTCGCCATTGCTGAGAGCTTCACTTCTCTCTTTG
CTTCCCTCCGTTTGGTTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGGGTGCACAAAATTTTAT
TACATAGCTTTAGTCAGATTGTGTTCTTTTGTGATTTCTAGCATAACAAAGGTTATTCTAGTGCTTGATGCGGCAACGAAAGGCAATCGATACATTAATTCTTCCTTGAG
GTATGCTTCAATGTCTTCTGGTATCTCCATTGTTCTACGGAAATTGGAAAATAGTCAATGTCCTTTGTTTTATATTTTCAGATTGAATCAGGAAATGAAAGGCATGGACA
GTCTAGCTGCTCAGCTAAAGGTTTTGAGGAAGAATGTGGATGAACTAGACTTGGCTGTGAACAAGCTGCTAAATTTTCCATGAGCTCCGCTTGGTCGTAGTTCTTGCAAG
CTCAATGATGTTTTTTTTTCACAAACAGCGAGAATACAGTTCATTCCATAGCTTCCTTCACATTTTACTCTAGGAAGCATCTCATTCCATGTTAGGCTCTTTGATGTGTT
TATAGGGATGAGCAAATTTTCTTGATCGCTTAATAATAATAAATTCATTCAATCGTAATCACTGTCTCTTTTCTTCAAAGG

Protein sequence

Show/hide protein sequence

MEQSPADSSASIETESQIPGTSPNSTTCSLIEDCTKTQSEIFKAIEVVEKDSLAIAESFTSLFASLRLVLSEVTSNSIDHMHCFNDAAGRLQESGCTKFYYIALVRLCSF
VISSITKVILVLDAATKGNRYINSSLRYASMSSGISIVLRKLENSQCPLFYIFRLNQEMKGMDSLAAQLKVLRKNVDELDLAVNKLLNFP

ClCG07G008090 (gene) of Watermelon (Charleston Gray) v2.5 genome