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ClCG07G008600 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G008600
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationCG_Chr07:22750094..22750716
RNA-Seq ExpressionClCG07G008600
SyntenyClCG07G008600
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016901223.1 PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo]8.4e-0944.44Show/hide
Query:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQLLVRRLYNSMTVEVASQV
        V S T    NPP   LLNQ++S+K+D  N+LLW+ +ALPI++SYK EGYLT +     +   + T E  S++
Subjt:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQLLVRRLYNSMTVEVASQV

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]4.6e-0759.09Show/hide
Query:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD
        NPP   +LNQ+T++K+D  N+LLW+ +ALPIL+ YKLEG+LTA+
Subjt:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]4.9e-0973.33Show/hide
Query:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQ
        +PP   LLNQ+TSIKMD  NFLLWQN+ALPILRSYKL  YLT D+
Subjt:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQ

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]9.3e-0836.94Show/hide
Query:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTA------------------------------------DQLLVRRLYNSM
        + S T    NPP   +LNQ+ S+K+D  N+LLWQ +ALPIL+SYKL+G+LT                                     D LL+  +YNSM
Subjt:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTA------------------------------------DQLLVRRLYNSM

Query:  TVEVASQVTRF
        T EVA Q+  F
Subjt:  TVEVASQVTRF

XP_038875135.1 uncharacterized protein LOC120067668 [Benincasa hispida]2.9e-0947.19Show/hide
Query:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYL--------------TADQLLVRRLYNSMTVEVASQVTRF
        + S  C    PP   LLNQ+TSIK++  NF+LW+ +AL ILR Y+LEG+L              TADQLL+  LYNSM  EVA Q+  F
Subjt:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYL--------------TADQLLVRRLYNSMTVEVASQVTRF

TrEMBL top hitse value%identityAlignment
A0A1S4DZ26 uncharacterized protein LOC1079912024.1e-0944.44Show/hide
Query:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQLLVRRLYNSMTVEVASQV
        V S T    NPP   LLNQ++S+K+D  N+LLW+ +ALPI++SYK EGYLT +     +   + T E  S++
Subjt:  VRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQLLVRRLYNSMTVEVASQV

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.2e-0759.09Show/hide
Query:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD
        NPP   +LNQ+T++K+D  N+LLW+ +ALPIL+ YKLEG+LTA+
Subjt:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X42.2e-0759.09Show/hide
Query:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD
        NPP   +LNQ+T++K+D  N+LLW+ +ALPIL+ YKLEG+LTA+
Subjt:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X32.2e-0759.09Show/hide
Query:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD
        NPP   +LNQ+T++K+D  N+LLW+ +ALPIL+ YKLEG+LTA+
Subjt:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTAD

A0A6J1DCW4 uncharacterized protein LOC1110195982.4e-0973.33Show/hide
Query:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQ
        +PP   LLNQ+TSIKMD  NFLLWQN+ALPILRSYKL  YLT D+
Subjt:  NPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACCCCAACAATGATCATCTCTTCAACCTGGAAAACCCCAATCTGAATCATGTTATCACAAAAACAACATTTGATTCGGCCTATGTGAAGAAAAACCCT
TATGCATATGAAGTCCGATCTAGAACCTGTTTTGTCGGCAACCCACCATTTGCCAATCTGCTGAATCAAGTTACCTCCATAAAGATGGATAGCAATAACTTTCTA
CTGTGGCAAAACATCGCACTTCCCATCCTTAGAAGCTACAAGCTTGAGGGGTACCTCACAGCTGATCAACTCTTAGTCAGACGGTTGTACAATTCCATGACGGTT
GAAGTGGCTTCTCAAGTCACTAGGTTCCCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACCCCAACAATGATCATCTCTTCAACCTGGAAAACCCCAATCTGAATCATGTTATCACAAAAACAACATTTGATTCGGCCTATGTGAAGAAAAACCCT
TATGCATATGAAGTCCGATCTAGAACCTGTTTTGTCGGCAACCCACCATTTGCCAATCTGCTGAATCAAGTTACCTCCATAAAGATGGATAGCAATAACTTTCTA
CTGTGGCAAAACATCGCACTTCCCATCCTTAGAAGCTACAAGCTTGAGGGGTACCTCACAGCTGATCAACTCTTAGTCAGACGGTTGTACAATTCCATGACGGTT
GAAGTGGCTTCTCAAGTCACTAGGTTCCCCAGTTAG
Protein sequenceShow/hide protein sequence
MANPNNDHLFNLENPNLNHVITKTTFDSAYVKKNPYAYEVRSRTCFVGNPPFANLLNQVTSIKMDSNNFLLWQNIALPILRSYKLEGYLTADQLLVRRLYNSMTV
EVASQVTRFPS