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ClCG07G010045 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G010045
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionmultiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like
Genome locationCG_Chr07:25737118..25738816
RNA-Seq ExpressionClCG07G010045
SyntenyClCG07G010045
Gene Ontology termsGO:0016554 - cytidine to uridine editing (biological process)
InterPro domainsIPR039206 - MORF/ORRM1/DAG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043479.1 multiple organellar RNA editing factor 8 [Cucumis melo var. makuwa]2.0e-1837.34Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK           +YL       GG                                             
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------

Query:  -----------PSSS------NNFNRPPPSPSNNFNG-----------LPPPPSLNFSGLPPPPPNPRGAPP----------------------------
                   P++S       NFNRPPP P NNFNG            PPPP  NF+G PPPPPN    PP                            
Subjt:  -----------PSSS------NNFNRPPPSPSNNFNG-----------LPPPPSLNFSGLPPPPPNPRGAPP----------------------------

Query:  ---HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV
           +NYWGAPQ NNYGGPSN G   AQNNY GV
Subjt:  ---HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV

XP_008437005.1 PREDICTED: multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Cucumis melo]1.5e-1837.5Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK           +YL       GG                                             
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------

Query:  -----------PSSS------NNFNRPPPSPSNNFNG----------LPPPPSLNFSGLPPPPPNPRGAPP-----------------------------
                   P++S       NFNRPPP P NNFNG           PPPP  NF+G PPPPPN    PP                             
Subjt:  -----------PSSS------NNFNRPPPSPSNNFNG----------LPPPPSLNFSGLPPPPPNPRGAPP-----------------------------

Query:  --HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV
          +NYWGAPQ NNYGGPSN G   AQNNY GV
Subjt:  --HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV

XP_011654842.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Cucumis sativus]1.8e-1941Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK           +YL       GG                                             
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------

Query:  -----------PSSS------NNFNRPPPSPSNNFNGLPPPPSLNFSGLPPPPPNP----------RGAPPHNYWGAPQPNNYGGPSNVGGLLAQNNYRG
                   P++S       NFNRPPP P NN+N  PPPP+ NF+  PPPPPN            G+ P+NYWGAPQ NNYGGPSN G + AQN+Y G
Subjt:  -----------PSSS------NNFNRPPPSPSNNFNGLPPPPSLNFSGLPPPPPNP----------RGAPPHNYWGAPQPNNYGGPSNVGGLLAQNNYRG

XP_038889853.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida]3.5e-1550.41Show/hide
Query:  KGNYLGGPSSSNNFNR----------PPPSPSNNFNGLPPPPSL------------NFSGLP----------PPPPNPRGAPPH--------NYWGAPQP
        +GNY GGP   NNFN+          PPP P NNFNG PPPP L            NF+G P          PPPPNP GAPPH        NYWGAPQP
Subjt:  KGNYLGGPSSSNNFNR----------PPPSPSNNFNGLPPPPSL------------NFSGLP----------PPPPNPRGAPPH--------NYWGAPQP

Query:  NNYGGPSNVGGLLAQNNYRGV
        NNYGGPS  G   AQN+Y GV
Subjt:  NNYGGPSNVGGLLAQNNYRGV

XP_038889853.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida]7.8e-0793.75Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK

XP_038889853.1 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida]6.0e-1532.54Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK--------------------------------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK                                                                    
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK--------------------------------------------------------------------

Query:  ----------------------------------------------------GNYLGG--PSSSNNFNRPPPSPSNNFNGLPPPPSLNFSGL--------
                                                            GNY GG  P   NNF+ PPP P NNF G PPPP  N++G         
Subjt:  ----------------------------------------------------GNYLGG--PSSSNNFNRPPPSPSNNFNGLPPPPSLNFSGL--------

Query:  ---PPPPPNPRGAPPH--------NYWGAPQPNNYGGPSNVGGLLAQNNYRG
           PPPPP+   APPH        NYWG P PNNYGGPS+ GG   QNNY G
Subjt:  ---PPPPPNPRGAPPH--------NYWGAPQPNNYGGPSNVGGLLAQNNYRG

TrEMBL top hitse value%identityAlignment
A0A0A0KPF6 Uncharacterized protein8.7e-2041Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK           +YL       GG                                             
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------

Query:  -----------PSSS------NNFNRPPPSPSNNFNGLPPPPSLNFSGLPPPPPNP----------RGAPPHNYWGAPQPNNYGGPSNVGGLLAQNNYRG
                   P++S       NFNRPPP P NN+N  PPPP+ NF+  PPPPPN            G+ P+NYWGAPQ NNYGGPSN G + AQN+Y G
Subjt:  -----------PSSS------NNFNRPPPSPSNNFNGLPPPPSLNFSGLPPPPPNP----------RGAPPHNYWGAPQPNNYGGPSNVGGLLAQNNYRG

A0A1S3ASM8 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like7.4e-1937.5Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK           +YL       GG                                             
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------

Query:  -----------PSSS------NNFNRPPPSPSNNFNG----------LPPPPSLNFSGLPPPPPNPRGAPP-----------------------------
                   P++S       NFNRPPP P NNFNG           PPPP  NF+G PPPPPN    PP                             
Subjt:  -----------PSSS------NNFNRPPPSPSNNFNG----------LPPPPSLNFSGLPPPPPNPRGAPP-----------------------------

Query:  --HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV
          +NYWGAPQ NNYGGPSN G   AQNNY GV
Subjt:  --HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV

A0A5A7TQJ8 Multiple organellar RNA editing factor 89.6e-1937.34Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK           +YL       GG                                             
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYL-------GG---------------------------------------------

Query:  -----------PSSS------NNFNRPPPSPSNNFNG-----------LPPPPSLNFSGLPPPPPNPRGAPP----------------------------
                   P++S       NFNRPPP P NNFNG            PPPP  NF+G PPPPPN    PP                            
Subjt:  -----------PSSS------NNFNRPPPSPSNNFNG-----------LPPPPSLNFSGLPPPPPNPRGAPP----------------------------

Query:  ---HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV
           +NYWGAPQ NNYGGPSN G   AQNNY GV
Subjt:  ---HNYWGAPQPNNYGGPSNVGGLLAQNNYRGV

A0A6J1E5B5 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X22.9e-1532.54Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK--------------------------------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK                                                                    
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK--------------------------------------------------------------------

Query:  ----------------------------------------------------GNYLGG--PSSSNNFNRPPPSPSNNFNGLPPPPSLNFSGL--------
                                                            GNY GG  P   NNF+ PPP P NNF G PPPP  N++G         
Subjt:  ----------------------------------------------------GNYLGG--PSSSNNFNRPPPSPSNNFNGLPPPPSLNFSGL--------

Query:  ---PPPPPNPRGAPPH--------NYWGAPQPNNYGGPSNVGGLLAQNNYRG
           PPPPP+   APPH        NYWG P PNNYGGPS+ GG   QNNY G
Subjt:  ---PPPPPNPRGAPPH--------NYWGAPQPNNYGGPSNVGGLLAQNNYRG

A0A6J1EA12 multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X17.1e-1431.18Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK--------------------------------------------------------------------
        EEE RMKIYSVSTRC FAFGCLVSEELSYKIK                                                                    
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK--------------------------------------------------------------------

Query:  ----------------------------------------------------GNYLGG--PSSSNNFN-----------RPPPSPSNNFNGLPPPPSLNF
                                                            GNY GG  P   NNF+            PPP P NNF G PPPP  N+
Subjt:  ----------------------------------------------------GNYLGG--PSSSNNFN-----------RPPPSPSNNFNGLPPPPSLNF

Query:  SGL-----------PPPPPNPRGAPPH--------NYWGAPQPNNYGGPSNVGGLLAQNNYRG
        +G            PPPPP+   APPH        NYWG P PNNYGGPS+ GG   QNNY G
Subjt:  SGL-----------PPPPPNPRGAPPH--------NYWGAPQPNNYGGPSNVGGLLAQNNYRG

SwissProt top hitse value%identityAlignment
Q9LKA5 Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial2.1e-0732.28Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK------------------GNYLGGP---------------------SSSNNFNRPPPSPSNN------
        E+E RMKIYSVSTRC +AFG LVSE+LS+K+K                   +Y G P                     + +N  NR    P NN      
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK------------------GNYLGGP---------------------SSSNNFNRPPPSPSNN------

Query:  -----------------FNGLPPPPSLNFSGLPPPPPNPRGA---PPH--NYWGAPQPNNYGGP-----------SNVGGLLAQNNYRG
                           G PPPP  +  G  PPPP+  G+   PPH    +G P PNN GGP           +N+GG     NY G
Subjt:  -----------------FNGLPPPPSLNFSGLPPPPPNPRGA---PPH--NYWGAPQPNNYGGP-----------SNVGGLLAQNNYRG

Arabidopsis top hitse value%identityAlignment
AT1G53260.1 LOCATED IN: endomembrane system1.4e-0632.97Show/hide
Query:  MKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYLGGP-----------------------------SSSNNFNRPPPSPSNNFNG--------
        MKIYSVS +C FAFG LVSE+LS+KIK           +YL G                              +++ N NR P  P N+  G        
Subjt:  MKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYLGGP-----------------------------SSSNNFNRPPPSPSNNFNG--------

Query:  ---LPPPPSLNFSGLPPPPP-------------------NPRGAPP-----HNYWGAPQPN---NYGG--PSNVGGLLAQNNYRG
             PPP+    G PPPPP                   N RG PP      NY G P PN   NY G  PSN+G      NY+G
Subjt:  ---LPPPPSLNFSGLPPPPP-------------------NPRGAPP-----HNYWGAPQPN---NYGG--PSNVGGLLAQNNYRG

AT1G53260.2 LOCATED IN: endomembrane system1.0e-0433.59Show/hide
Query:  MKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYLGGP-----------------------------SSSNNFNRPPPSPSNNFNG--------
        MKIYSVS +C FAFG LVSE+LS+KIK           +YL G                              +++ N NR P  P N+  G        
Subjt:  MKIYSVSTRCCFAFGCLVSEELSYKIK----------GNYLGGP-----------------------------SSSNNFNRPPPSPSNNFNG--------

Query:  ---LPPPPSLNFSGLPPPPP---NPRGAPPH
             PPP+    G PPPPP   N    PPH
Subjt:  ---LPPPPSLNFSGLPPPPP---NPRGAPPH

AT3G15000.1 cobalt ion binding1.5e-0832.28Show/hide
Query:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK------------------GNYLGGP---------------------SSSNNFNRPPPSPSNN------
        E+E RMKIYSVSTRC +AFG LVSE+LS+K+K                   +Y G P                     + +N  NR    P NN      
Subjt:  EEEGRMKIYSVSTRCCFAFGCLVSEELSYKIK------------------GNYLGGP---------------------SSSNNFNRPPPSPSNN------

Query:  -----------------FNGLPPPPSLNFSGLPPPPPNPRGA---PPH--NYWGAPQPNNYGGP-----------SNVGGLLAQNNYRG
                           G PPPP  +  G  PPPP+  G+   PPH    +G P PNN GGP           +N+GG     NY G
Subjt:  -----------------FNGLPPPPSLNFSGLPPPPPNPRGA---PPH--NYWGAPQPNNYGGP-----------SNVGGLLAQNNYRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGAGAATTCTAAATGGAATTCCGGGTCACCACAGATACTATTTTCTCTATCCGCTCCTTCACTACAGGATAATTTCTCAGTATATCGGTGTCTATGT
GATAAATGTGAGGAAGAAGGTAGGATGAAGATATACTCTGTTTCAACCAGATGCTGCTTTGCATTTGGGTGCCTTGTTTCCGAAGAACTTTCTTACAAAATCAAA
GGTAACTATTTGGGAGGACCATCATCGTCGAACAATTTTAATAGACCACCGCCTTCGCCATCGAACAACTTTAACGGACTTCCGCCACCGCCATCACTGAACTTT
AGCGGACTACCACCACCACCACCAAACCCCCGAGGAGCACCACCACACAACTATTGGGGAGCACCACAGCCAAACAACTATGGTGGACCTTCAAACGTCGGTGGG
CTGCTTGCACAAAACAACTACAGGGGTGTAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGAGAATTCTAAATGGAATTCCGGGTCACCACAGATACTATTTTCTCTATCCGCTCCTTCACTACAGGATAATTTCTCAGTATATCGGTGTCTATGT
GATAAATGTGAGGAAGAAGGTAGGATGAAGATATACTCTGTTTCAACCAGATGCTGCTTTGCATTTGGGTGCCTTGTTTCCGAAGAACTTTCTTACAAAATCAAA
GGTAACTATTTGGGAGGACCATCATCGTCGAACAATTTTAATAGACCACCGCCTTCGCCATCGAACAACTTTAACGGACTTCCGCCACCGCCATCACTGAACTTT
AGCGGACTACCACCACCACCACCAAACCCCCGAGGAGCACCACCACACAACTATTGGGGAGCACCACAGCCAAACAACTATGGTGGACCTTCAAACGTCGGTGGG
CTGCTTGCACAAAACAACTACAGGGGTGTAGCCTAA
Protein sequenceShow/hide protein sequence
MEFENSKWNSGSPQILFSLSAPSLQDNFSVYRCLCDKCEEEGRMKIYSVSTRCCFAFGCLVSEELSYKIKGNYLGGPSSSNNFNRPPPSPSNNFNGLPPPPSLNF
SGLPPPPPNPRGAPPHNYWGAPQPNNYGGPSNVGGLLAQNNYRGVA