; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG07G010700 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G010700
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPhotosystem II 10 kDa polypeptide, chloroplastic
Genome locationCG_Chr07:26586130..26592720
RNA-Seq ExpressionClCG07G010700
SyntenyClCG07G010700
Gene Ontology termsGO:0010270 - photosystem II oxygen evolving complex assembly (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR006814 - Photosystem II PsbR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062951.1 photosystem II 10 kDa polypeptide [Cucumis melo var. makuwa]7.2e-6494.2Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAAS+MTSVSLKPAPFTVEKSARGLPSLARNS  FKV ASGGKKIKTDKPYGINGSMNLRDGVDASGR+ KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

XP_008451826.1 PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Cucumis melo]3.2e-6494.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSARGLPSLARNS  FKV ASGGKKIKTDKPYGINGSMNLRDGVDASGR+ KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

XP_022136536.1 photosystem II 10 kDa polypeptide, chloroplastic [Momordica charantia]6.5e-6594.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR S  FKVEASGGKKIKTDKPYGINGSMNLRDG+DASGR+GKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

XP_023553544.1 photosystem II 10 kDa polypeptide, chloroplastic [Cucurbita pepo subsp. pepo]5.5e-6494.2Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEK+ARG+PSLAR S  FKVEASGGKKIKTDKPYGINGSMNLRDGVDASGR+GKGKGVYQ+VDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

XP_038876356.1 photosystem II 10 kDa polypeptide, chloroplastic-like [Benincasa hispida]5.3e-6797.1Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDG+DASGR+GKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KXH3 Photosystem II 10 kDa polypeptide, chloroplastic4.5e-6494.2Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA GLPSLAR S  FKV ASGGKKIKTDKPYGINGSMNLRDG+DASGR+GKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

A0A1S3BSD1 Photosystem II 10 kDa polypeptide, chloroplastic1.6e-6494.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSARGLPSLARNS  FKV ASGGKKIKTDKPYGINGSMNLRDGVDASGR+ KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

A0A5A7VB86 Photosystem II 10 kDa polypeptide, chloroplastic3.5e-6494.2Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAAS+MTSVSLKPAPFTVEKSARGLPSLARNS  FKV ASGGKKIKTDKPYGINGSMNLRDGVDASGR+ KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

A0A5D3CXX1 Photosystem II 10 kDa polypeptide, chloroplastic1.6e-6494.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSARGLPSLARNS  FKV ASGGKKIKTDKPYGINGSMNLRDGVDASGR+ KGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        +GDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

A0A6J1C3S3 Photosystem II 10 kDa polypeptide, chloroplastic3.1e-6594.93Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
        MAASVMTSVSLKPAPFTVEKSA+GLPSLAR S  FKVEASGGKKIKTDKPYGINGSMNLRDG+DASGR+GKGKGVYQFVDKYGANVDGYSPIYDTKDWSP
Subjt:  MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSP

Query:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        SGDVYVGGTTGLAIWA TLAGLLAGGALLVYNTSALVQ
Subjt:  SGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

SwissProt top hitse value%identityAlignment
P06183 Photosystem II 10 kDa polypeptide, chloroplastic1.8e-5480.58Show/hide
Query:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM+S+SLKP  FT+EK S +GLPSLAR+S  FKV ASG KK+KTDKPYGINGSM LRDGVDASGR+ KGKGVYQ+VDKYGANVDGYSPIY+T +WS
Subjt:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWA TL G+LAGGALLVYNTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

P27202 Photosystem II 10 kDa polypeptide, chloroplastic3.8e-5278.57Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDW
        MAASVM +SV+LKPA FTVEK +ARGLPSL R    FK+ ASG KKIKTDKP+GINGSM+LRDGVDASGR+GKG GVY++VDKYGANVDGYSPIY+  +W
Subjt:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDW

Query:  SPSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        S SGDVY GG TGLAIWA TLAG+LAGGALLVYNTSAL Q
Subjt:  SPSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

P49108 Photosystem II 10 kDa polypeptide, chloroplastic1.9e-5178.72Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNS-VPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKD
        MAASVM +SV+LKPA FTVEK SARGLPSL R S   F++ ASG KKIKTDKP+G+NGSM+LRDGVDASGR+GKG GVY+FVDKYGANVDGYSPIY+  +
Subjt:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNS-VPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKD

Query:  WSPSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        WS SGDVY GG TGLAIWA TLAG+LAGGALLVYNTSAL Q
Subjt:  WSPSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

Q40163 Photosystem II 10 kDa polypeptide, chloroplastic7.0e-5479.86Show/hide
Query:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM+S+SLKP  FT+EK S +GLPSL R+S  FKV ASG KK+KTDKPYGINGSM LRDGVDASGR+ KGKGVYQ+VDKYGANVDGYSPIY+T +WS
Subjt:  MAASVMTSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWA TL G+LAGGALLVYNTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

Q40519 Photosystem II 10 kDa polypeptide, chloroplastic9.8e-5681.29Show/hide
Query:  MAASVMTSVSLKPAPFTVEKSA-RGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWS
        MA++VM   SLKPAPF+VEK+A +GLPSLAR+S  F+V+ASG KK+KTDKPYGINGSM+LRDGVDASGR+ KGKGVYQFVDKYGANVDGYSPIY+T DWS
Subjt:  MAASVMTSVSLKPAPFTVEKSA-RGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWS

Query:  PSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        PSGDVYVGGTTGLAIWA TL G+LAGGALLV+NTSAL Q
Subjt:  PSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ

Arabidopsis top hitse value%identityAlignment
AT1G79040.1 photosystem II subunit R2.7e-5378.57Show/hide
Query:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDW
        MAASVM +SV+LKPA FTVEK +ARGLPSL R    FK+ ASG KKIKTDKP+GINGSM+LRDGVDASGR+GKG GVY++VDKYGANVDGYSPIY+  +W
Subjt:  MAASVM-TSVSLKPAPFTVEK-SARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDW

Query:  SPSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ
        S SGDVY GG TGLAIWA TLAG+LAGGALLVYNTSAL Q
Subjt:  SPSGDVYVGGTTGLAIWAATLAGLLAGGALLVYNTSALVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCTCGGTGATGACCTCAGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAATCGGCGAGAGGTCTTCCATCTCTGGCGAGAAACTCCGTCCCCTTCAAGGT
CGAGGCCAGTGGCGGGAAGAAGATCAAGACCGACAAACCCTATGGAATCAATGGTTCGATGAATTTGAGGGATGGAGTTGATGCATCGGGAAGAAGGGGCAAGGGAAAGG
GAGTGTACCAATTTGTCGACAAGTACGGGGCCAATGTCGATGGCTACAGTCCCATCTACGACACCAAAGACTGGTCTCCAAGTGGTGACGTCTATGTTGGTGGTACTACT
GGATTGGCCATTTGGGCAGCGACCTTGGCTGGCCTTCTTGCTGGAGGTGCTCTTCTTGTGTACAACACTAGTGCTTTGGTGCAGCCAAACAAAGGGCTGACGCTACGACG
TTGTCCTGTGGTGCTGCAACACCCATCACACGACATAGGAACATCAGAGGTGCGTGCAACATGCGCATCACTAGGTCGTCGAAACACCGCAACGCTGCAACATGATGCTT
CGATAGAGGGTAGCAATGCTGCGACATTGTGCCAAGGGCTGCAGCGCTGTGATACATCTTAA
mRNA sequenceShow/hide mRNA sequence
GCCATTCATGGAGTGCCACGTGTCCCCTAGCGATCACATTTCTCAGATTATCAAGCTCCAGTTCCGTTTTGCGCCATTGCAGATTTTCGAGCTAAAGAAGAAGAAGAAGA
AGAAGAAGAGAAGCTAATCGATCGGAAATGGCGGCCTCGGTGATGACCTCAGTGAGTCTCAAACCAGCTCCCTTCACCGTCGAGAAATCGGCGAGAGGTCTTCCATCTCT
GGCGAGAAACTCCGTCCCCTTCAAGGTCGAGGCCAGTGGCGGGAAGAAGATCAAGACCGACAAACCCTATGGAATCAATGGTTCGATGAATTTGAGGGATGGAGTTGATG
CATCGGGAAGAAGGGGCAAGGGAAAGGGAGTGTACCAATTTGTCGACAAGTACGGGGCCAATGTCGATGGCTACAGTCCCATCTACGACACCAAAGACTGGTCTCCAAGT
GGTGACGTCTATGTTGGTGGTACTACTGGATTGGCCATTTGGGCAGCGACCTTGGCTGGCCTTCTTGCTGGAGGTGCTCTTCTTGTGTACAACACTAGTGCTTTGGTGCA
GCCAAACAAAGGGCTGACGCTACGACGTTGTCCTGTGGTGCTGCAACACCCATCACACGACATAGGAACATCAGAGGTGCGTGCAACATGCGCATCACTAGGTCGTCGAA
ACACCGCAACGCTGCAACATGATGCTTCGATAGAGGGTAGCAATGCTGCGACATTGTGCCAAGGGCTGCAGCGCTGTGATACATCTTAA
Protein sequenceShow/hide protein sequence
MAASVMTSVSLKPAPFTVEKSARGLPSLARNSVPFKVEASGGKKIKTDKPYGINGSMNLRDGVDASGRRGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPSGDVYVGGTT
GLAIWAATLAGLLAGGALLVYNTSALVQPNKGLTLRRCPVVLQHPSHDIGTSEVRATCASLGRRNTATLQHDASIEGSNAATLCQGLQRCDTS