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ClCG07G011950 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G011950
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransaldolase
Genome locationCG_Chr07:28245029..28245677
RNA-Seq ExpressionClCG07G011950
SyntenyClCG07G011950
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006098 - pentose-phosphate shunt (biological process)
GO:0009749 - response to glucose (biological process)
GO:0009809 - lignin biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0004801 - sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044500.1 transaldolase [Cucumis melo var. makuwa]4.8e-1582.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLSTSIS+P+LSSSVNPRSSLSS SF+AFRPSSDFFTK SAS+LS+ R S LKGSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
KAG6581976.1 hypothetical protein SDJN03_21978, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1482.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASIS LSTSISAPSLSSSVNPRSSLSS SFIAFRPSSDFF K+SAS+LS+ R S L+GSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
XP_008454148.1 PREDICTED: transaldolase [Cucumis melo]4.8e-1582.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLSTSIS+P+LSSSVNPRSSLSS SF+AFRPSSDFFTK SAS+LS+ R S LKGSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
XP_022955732.1 uncharacterized protein LOC111457643 [Cucurbita moschata]2.4e-1482.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASIS LSTSISAPSLSSSVNPRSSLSS SFIAFRPSSDFF K+SAS+LS+ R S L+GSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
XP_038877000.1 transaldolase [Benincasa hispida]2.4e-1484.38Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLSTSISAPSLSSSV  RSSLSS SFIAFRPSSDFFTK+SAS+LS+ R S LKGSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
TrEMBL top hitse value%identityAlignment
A0A0A0KX30 Transaldolase4.4e-1479.69Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLST IS+P+LSSS NPRSSLSS+SF+AFRPSSDFFTKLSAS+LS+ R S LKGSL V+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
A0A1S3BYP7 Transaldolase2.3e-1582.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLSTSIS+P+LSSSVNPRSSLSS SF+AFRPSSDFFTK SAS+LS+ R S LKGSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
A0A5A7TMS5 Transaldolase2.3e-1582.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLSTSIS+P+LSSSVNPRSSLSS SF+AFRPSSDFFTK SAS+LS+ R S LKGSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
A0A5D3E1I6 Transaldolase2.3e-1582.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASISKLSTSIS+P+LSSSVNPRSSLSS SF+AFRPSSDFFTK SAS+LS+ R S LKGSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
A0A6J1GUF1 Transaldolase1.2e-1482.81Show/hide
Query:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
        MASIS LSTSISAPSLSSSVNPRSSLSS SFIAFRPSSDFF K+SAS+LS+ R S L+GSLVV+
Subjt:  MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTTCCAAGCTGTCCACTTCCATCTCTGCTCCTTCTCTATCCTCCTCTGTTAACCCGCGATCTTCCCTCTCCTCCAGCTCCTTCATCGCCTTCCGC
CCCTCTTCTGACTTCTTCACCAAGCTCTCCGCGTCTAAATTGTCCCTTCACAGAGCTTCCGGTTTGAAGGGTTCCTTGGTTGTTCAGTTCTTGGAAATGATAATG
ATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTTCCAAGCTGTCCACTTCCATCTCTGCTCCTTCTCTATCCTCCTCTGTTAACCCGCGATCTTCCCTCTCCTCCAGCTCCTTCATCGCCTTCCGC
CCCTCTTCTGACTTCTTCACCAAGCTCTCCGCGTCTAAATTGTCCCTTCACAGAGCTTCCGGTTTGAAGGGTTCCTTGGTTGTTCAGTTCTTGGAAATGATAATG
ATCTGA
Protein sequenceShow/hide protein sequence
MASISKLSTSISAPSLSSSVNPRSSLSSSSFIAFRPSSDFFTKLSASKLSLHRASGLKGSLVVQFLEMIMI