CuGenDBv2

Gene ID	ClCG07G013830
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	nucleolin 1
Genome location	CG_Chr07:30321574..30322960
RNA-Seq Expression	ClCG07G013830
Synteny	ClCG07G013830
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR008984 - SMAD/FHA domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7018280.1 hypothetical protein SDJN02_20148, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-129

80.13

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVTIFGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFEVIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
         +WF+LNKI EFEEGE+I S  SDS+DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSDDDEDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF
        +K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RPKYSTRSKD NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF

Query:  SDDDEDD
        SDD+EDD
Subjt:  SDDDEDD

XP_022955501.1 uncharacterized protein LOC111457508 [Cucurbita moschata]

9.6e-129

79.8

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVT FGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFEVIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
        P+WF+LNKIAEFEEGE+I S SSDS DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSDDDEDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF
        +K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP+YSTRS D NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF

Query:  SDDDEDD
        SD +EDD
Subjt:  SDDDEDD

XP_022980683.1 protein BFR2 [Cucurbita maxima]

1.9e-129

80.46

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVTIFGRGSGFA KDRT+SR HILI+AKTS+NS+G  MEPRVSFEVIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
        P+WF+LNKIAEFEEGE+I S SSDS DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSDD+EDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF
        +K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RPKYSTRSKD NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF

Query:  SDDDEDD
        SDD EDD
Subjt:  SDDDEDD

XP_023526483.1 protein BFR2 [Cucurbita pepo subsp. pepo]

1.3e-128

79.8

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV REPVTIFGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFEVIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
         +WF+LNKI EFEEGE+I S SSDS+DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF
        +K   RGKRKKGAN+DDEDWTDENEDAV MITKTK F+RPKYSTRSKD NKTHKD++KAAKS+KDY EEDEDDETLGGFIVDD VDN E M+EDE+EEEF
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF

Query:  SDDDEDD
        SDD+EDD
Subjt:  SDDDEDD

XP_038898830.1 protein PIF [Benincasa hispida]

1.1e-129

80.57

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVTIFGRGSGFASKDRT+SRRHILI+AKTS+NS+GA +EP VSFEVIGRNPIWV+SSKNGEIRTFRRSEKG+MA GESFCVG QE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
        PIWF+LNKIAEFEE +Q  S SSDS DIDVSGIDPVK                  EFGFL +GHEFECYGNRVIRD KKWDWFLDEPRKDSDDDEDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHM----DE
        KKRG +GKRKKGANSDDEDWTDENEDAVEMITKTK FRRPKYSTRSKD +KT  D++KAA+SNKDYD   EEDEDDETLGGFIVDD  DNVE M    DE
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHM----DE

Query:  DEEEEEFSDDDEDD
        DEEEEEFSDDDE+D
Subjt:  DEEEEEFSDDDEDD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHB4 nucleolin 1

2.6e-127

79.74

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVTIFGRGSGFASKDRTISRRHILI+AKTSDN++GA MEP+VSFEVIGRNPIWV+SSKNGEIRTFRRSEKGKMAPGESFCVGGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDS-DDDEDYGR
        PIWF+LNKI EFEEG+ + S SSDS DIDVSGIDPVK                  EFGFLV+GHEFECYGNRVIRD KKWDWFLD P KDS DDDEDY R
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDS-DDDEDYGR

Query:  KKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHMDEDEE
        KKKRG RGKRKKGANSDDEDWTDENEDAV+MITK +  +RPKYSTRSKD NK   D+RKAAKSNKDYD   EEDEDDETLGGFIVDD VDNVE MDEDEE
Subjt:  KKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHMDEDEE

Query:  EEEFSDDDEDD
        EE   D+D+++
Subjt:  EEEFSDDDEDD

A0A5D3BXV5 Nucleolin 1

2.6e-127

79.74

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVTIFGRGSGFASKDRTISRRHILI+AKTSDN++GA MEP+VSFEVIGRNPIWV+SSKNGEIRTFRRSEKGKMAPGESFCVGGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDS-DDDEDYGR
        PIWF+LNKI EFEEG+ + S SSDS DIDVSGIDPVK                  EFGFLV+GHEFECYGNRVIRD KKWDWFLD P KDS DDDEDY R
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDS-DDDEDYGR

Query:  KKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHMDEDEE
        KKKRG RGKRKKGANSDDEDWTDENEDAV+MITK +  +RPKYSTRSKD NK   D+RKAAKSNKDYD   EEDEDDETLGGFIVDD VDNVE MDEDEE
Subjt:  KKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYD---EEDEDDETLGGFIVDDGVDNVEHMDEDEE

Query:  EEEFSDDDEDD
        EE   D+D+++
Subjt:  EEEFSDDDEDD

A0A6J1DEJ6 protein bfr2

1.5e-127

77.67

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLVV EPVTIFGRGSGFASKDRT+SRRH+LI+AKTS+N DGA +EP +SFEVIGRNPIWV+S KNGEIRTFRRSEKG++APGESFCVGGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQI-----------LSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRK
        P WFKLNKIAE EEG++I           L+ SSDS+DIDVSGIDPVK                  EFGFLV+GHEFECYGNRVIRDAKKWDWFLDEPRK
Subjt:  PIWFKLNKIAEFEEGEQI-----------LSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRK

Query:  DSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVE
         SDDDEDYGR+K+RG RGKRKKGANSDDEDWTDENEDAVEMI K K  +RPKYSTRSKD NKT+KD+ KAA SNKDYDEEDEDDETLGGFIVDD VDN E
Subjt:  DSDDDEDYGRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVE

Query:  HMDEDEEEEEFSDDDEDD
         MDED EEEEFSDDD++D
Subjt:  HMDEDEEEEEFSDDDEDD

A0A6J1GTX9 uncharacterized protein LOC111457508

4.7e-129

79.8

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVT FGRGSGFA KDRT+SRRHILI+AKTS+NS+G  MEPRVSFEVIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
        P+WF+LNKIAEFEEGE+I S SSDS DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSDDDEDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF
        +K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RP+YSTRS D NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF

Query:  SDDDEDD
        SD +EDD
Subjt:  SDDDEDD

A0A6J1J012 protein BFR2

9.4e-130

80.46

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Query:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE
        MEIAGEDGSKLV+REPVTIFGRGSGFA KDRT+SR HILI+AKTS+NS+G  MEPRVSFEVIG+NPIWV+S KNGEIRTFR SEKG+M PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQE

Query:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK
        P+WF+LNKIAEFEEGE+I S SSDS DIDVSGIDPVK                  EFGFL  GHEFECYGNRVIRDAKKWDWFLDE RKDSDD+EDYGRK
Subjt:  PIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRK

Query:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF
        +K   RGKRKKGAN+DDEDWTDENEDAVEMITKTK F+RPKYSTRSKD NKTHKD++KAAKSNKDY EEDEDDETLGGFIVDD VDN E MDEDE+EEEF
Subjt:  KKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEF

Query:  SDDDEDD
        SDD EDD
Subjt:  SDDDEDD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13780.1 SMAD/FHA domain-containing protein

5.0e-51

39.38

Show/hide

Query:  MEIAGEDGSKLVVREPV-TIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNG-EIRTFRRSEKGKMAPGESFCVGG
        MEI GEDG+KL ++  V  +FGRG+GF ++D T+SRRH+ +  K +  + G      VSFEV+GRNP+W+++ + G +I+T R+ E G++A G+ FCV G
Subjt:  MEIAGEDGSKLVVREPV-TIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNG-EIRTFRRSEKGKMAPGESFCVGG

Query:  QEPIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFL-DEPRKDSDDDEDY
          PIWF L +  E  E E+ L H     +ID                       P+ EFGFLV+G EF+ Y    +RD K+W+WFL D    +SD DED 
Subjt:  QEPIWFKLNKIAEFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFL-DEPRKDSDDDEDY

Query:  GRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNK----------DYDEEDEDDETLGGFIVDDGVDN
         +K ++G   KR++   ++D+DW+ E+++  E++ K+K    P YSTRSK   KT KD   ++ S+           D +EED+DDETLGGFIV D    
Subjt:  GRKKKRGARGKRKKGANSDDEDWTDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNK----------DYDEEDEDDETLGGFIVDDGVDN

Query:  VEHMDEDEEEEEFSDDDEDD
        +E  +E+E+E +  D++++D
Subjt:  VEHMDEDEEEEEFSDDDEDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGATCGCCGGCGAAGACGGTTCAAAGTTAGTTGTACGAGAGCCAGTGACGATATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAATATCTCGTCGTCA
CATTTTAATCCAAGCTAAAACCTCAGATAACAGTGATGGAGCTTCCATGGAGCCTAGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCAGAGCAGCAAAA
ATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCAAGATGGCGCCTGGTGAATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTCAAATTAAACAAAATCGCT
GAATTCGAAGAAGGGGAGCAAATTCTTTCGCATTCTTCTGATTCGAAGGATATCGATGTTTCTGGCATTGACCCTGTCAAAGAAGTTCCAAATTGTGAATGGATGATACT
GATTGTTCTTACTGTTCCCTTGTCAGAATTCGGTTTTCTTGTTGTGGGACACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTT
TGGATGAGCCGAGAAAAGACAGTGATGATGACGAAGATTATGGGAGGAAAAAGAAGAGAGGAGCAAGGGGAAAGAGGAAAAAAGGAGCAAACAGTGACGATGAAGATTGG
ACAGATGAGAATGAAGATGCTGTGGAAATGATTACAAAAACAAAGAACTTTCGGAGACCCAAATACTCAACAAGATCAAAAGATGGCAATAAGACTCACAAGGATCGAAG
GAAGGCTGCTAAATCTAATAAAGACTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGGAGTAGATAATGTAGAACATATGGACGAAG
ATGAAGAAGAAGAAGAATTTTCAGATGATGATGAGGACGATTGA

mRNA sequence

Show/hide mRNA sequence

CAAAAATAGAACGTTTCCGAAATTTCAGCTTTCAAATACTTCGAAGCGGCATTTGATGGAGATCGCCGGCGAAGACGGTTCAAAGTTAGTTGTACGAGAGCCAGTGACGA
TATTCGGAAGAGGCTCAGGTTTTGCTTCCAAAGATCGAACAATATCTCGTCGTCACATTTTAATCCAAGCTAAAACCTCAGATAACAGTGATGGAGCTTCCATGGAGCCT
AGAGTTTCCTTCGAGGTTATCGGGAGGAACCCTATTTGGGTCCAGAGCAGCAAAAATGGCGAAATCAGAACATTTAGAAGATCGGAAAAGGGCAAGATGGCGCCTGGTGA
ATCGTTCTGCGTGGGTGGGCAGGAACCAATTTGGTTCAAATTAAACAAAATCGCTGAATTCGAAGAAGGGGAGCAAATTCTTTCGCATTCTTCTGATTCGAAGGATATCG
ATGTTTCTGGCATTGACCCTGTCAAAGAAGTTCCAAATTGTGAATGGATGATACTGATTGTTCTTACTGTTCCCTTGTCAGAATTCGGTTTTCTTGTTGTGGGACACGAG
TTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTTTGGATGAGCCGAGAAAAGACAGTGATGATGACGAAGATTATGGGAGGAAAAAGAA
GAGAGGAGCAAGGGGAAAGAGGAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCTGTGGAAATGATTACAAAAACAAAGAACTTTCGGA
GACCCAAATACTCAACAAGATCAAAAGATGGCAATAAGACTCACAAGGATCGAAGGAAGGCTGCTAAATCTAATAAAGACTATGATGAAGAAGATGAAGATGATGAAACT
TTAGGAGGTTTTATTGTAGATGATGGAGTAGATAATGTAGAACATATGGACGAAGATGAAGAAGAAGAAGAATTTTCAGATGATGATGAGGACGATTGA

Protein sequence

Show/hide protein sequence

MEIAGEDGSKLVVREPVTIFGRGSGFASKDRTISRRHILIQAKTSDNSDGASMEPRVSFEVIGRNPIWVQSSKNGEIRTFRRSEKGKMAPGESFCVGGQEPIWFKLNKIA
EFEEGEQILSHSSDSKDIDVSGIDPVKEVPNCEWMILIVLTVPLSEFGFLVVGHEFECYGNRVIRDAKKWDWFLDEPRKDSDDDEDYGRKKKRGARGKRKKGANSDDEDW
TDENEDAVEMITKTKNFRRPKYSTRSKDGNKTHKDRRKAAKSNKDYDEEDEDDETLGGFIVDDGVDNVEHMDEDEEEEEFSDDDEDD

ClCG07G013830 (gene) of Watermelon (Charleston Gray) v2.5 genome