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ClCG07G014060 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G014060
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationCG_Chr07:30591416..30591940
RNA-Seq ExpressionClCG07G014060
SyntenyClCG07G014060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]1.2e-4879.89Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPP-----PPPSSSPPPFSPPPPFPPPPPPGRR
        MERPLTTLIFVISGFAFSVLSLLVESQTPD AN TL     SPP+PSPPPPSP PPPP L PPPPPPPPP     PPPS SPPPFSP     PPPPP R 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPP-----PPPSSSPPPFSPPPPFPPPPPPGRR

Query:  RLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        R SPPP  A+S   +KK PPVPP NINTNQ SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  RLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]3.6e-4880.46Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPP
        MERPLTTLIFVI+GFAFSVLSLLVESQTPDGAN TLSPP  S P PSP PP PP PPP   P PPPP  PPPPS SPPPFSP    PPPPPP R R +PP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPP

Query:  PSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        P  A+S   +KK PPVPP NINTNQGSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_022948467.1 leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]1.2e-3066.67Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPPPLLSPPPPPPPPPPPPSSSPPP----FSPPPP-FPPPP--
        MERP +TLIFVISGFAFS+LSLLVESQ  DGA  + SPP   PP PSPPPPS   PPPPPP LSPP  PPPP P P+  PPP     SPPPP FPPPP  
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPPPLLSPPPPPPPPPPPPSSSPPP----FSPPPP-FPPPP--

Query:  PPGRRRLSPPPSHATSAGNRKKSPPVPPNNINTN--QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        P  + R +PPP    ++ +  K PP    N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  PPGRRRLSPPPSHATSAGNRKKSPPVPPNNINTN--QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_023523257.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]3.1e-3167.88Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPPPLLSPPPPPPP------PPPPPSSSPPP----FSPPPP-F
        MERP +TLIFVISGFAFS+LSLLVESQ  DGA S+ SPP   PP PSPPPPS   PPPPPP LSPP  PPP      PPPPP+  PPP     SPPPP F
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPPPLLSPPPPPPP------PPPPPSSSPPP----FSPPPP-F

Query:  PPPP--PPGRRRLSPPPSHATSAGN--RKKSPPVPPNNINTN-QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPPP  P  + R +PPPS    A +   KK P V  NN + N +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  PPPP--PPGRRRLSPPPSHATSAGN--RKKSPPVPPNNINTN-QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]1.6e-4881.08Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPP----------SSSPPPFSPPPPFPPPP
        MERPLTTLIFVISGFAFSVLSLLVESQT DGAN TL     SPPIPSPPPPSPPPPPP LSP PPPPPPPPPP          S SPPPFSPPPPFP P 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPP----------SSSPPPFSPPPPFPPPP

Query:  PPGRRRLSPPPSHATSAGNRKKSPPVPPNNI-NTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PP RR   PPP HA+   N KKSPPVPP NI NTNQGSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPGRRRLSPPPSHATSAGNRKKSPPVPPNNI-NTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein2.1e-4981.03Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPP
        MERPLTTLIFVI+GFAFSVLSLLVESQTPDGAN TLSPP  S P PSP PP PP PPP   PPPPPP  PPPPS SPPPFSP    PPPPPP R R +PP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPP

Query:  PSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        P  A+S   +KK PPVPP NINTNQGSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A1S3CKG6 leucine-rich repeat extensin-like protein 36.0e-4979.89Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPP-----PPPSSSPPPFSPPPPFPPPPPPGRR
        MERPLTTLIFVISGFAFSVLSLLVESQTPD AN TL     SPP+PSPPPPSP PPPP L PPPPPPPPP     PPPS SPPPFSP     PPPPP R 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPP-----PPPSSSPPPFSPPPPFPPPPPPGRR

Query:  RLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        R SPPP  A+S   +KK PPVPP NINTNQ SKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  RLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1DGD7 proline-rich receptor-like protein kinase PERK96.1e-2563.13Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPP-IPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFP--PPPPPGRRRL
        MERPLTT IFVISGFAFS+LSLLVE Q  D  NS ++P   SPP +PSPPP SP       S PPP PP PP PS    P SPPPP P  PPPP  RR  
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPP-IPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFP--PPPPPGRRRL

Query:  SPPPSHATSAGNRK-KSPPVPPNNINTNQGSKRS-LNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        SPPPS A+SA N   +       N   NQ  KRS LN GK+VGLFFVGIAAVLQ+CVVGFLVFKRRQLLR K++YE FS
Subjt:  SPPPSHATSAGNRK-KSPPVPPNNINTNQGSKRS-LNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1G9A4 leucine-rich repeat extensin-like protein 35.7e-3166.67Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPPPLLSPPPPPPPPPPPPSSSPPP----FSPPPP-FPPPP--
        MERP +TLIFVISGFAFS+LSLLVESQ  DGA  + SPP   PP PSPPPPS   PPPPPP LSPP  PPPP P P+  PPP     SPPPP FPPPP  
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPS---PPPPPPLLSPPPPPPPPPPPPSSSPPP----FSPPPP-FPPPP--

Query:  PPGRRRLSPPPSHATSAGNRKKSPPVPPNNINTN--QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        P  + R +PPP    ++ +  K PP    N N++  +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  PPGRRRLSPPPSHATSAGNRKKSPPVPPNNINTN--QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1KAI1 leucine-rich repeat extensin-like protein 31.7e-3064.39Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP------------------PPPPPP---PPPPSSSPP-
        MERPL+T IFVISGFAFS+LSLLVESQ  DGA S+ SPP   PP PSPPPPSPPPPPP LSPP                  PPPP P   PPPP   PP 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP------------------PPPPPP---PPPPSSSPP-

Query:  ----PFSPPPPFPPPP-PPGRRRLS---PPPSHATSAGNRKKSPPVPPNNINTN-QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
            P SPPP FPPPP PP  +  S   PPP  A+S  N KK P V  NN + N +GSKRSLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD+
Subjt:  ----PFSPPPPFPPPP-PPGRRRLS---PPPSHATSAGNRKKSPPVPPNNINTN-QGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR

Query:  YEGFS
        Y+GFS
Subjt:  YEGFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54215.1 proline-rich family protein6.9e-0544.89Show/hide
Query:  IFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPP----------PPPPPP------PSSSPPPFSPPPPFPPPPPP
        +F+++ F      LLV+SQ P      L P    PP P PPPP PPPPPP   PPPPP          PPPPPP      P SSPPP  PPP   PPP P
Subjt:  IFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPP----------PPPPPP------PSSSPPPFSPPPPFPPPPPP

Query:  GRRRLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD
         ++ L  P  H           P PP   +  +  +  LN GK VGL FVG+ A+LQ+ VV FLVFKR+QLL +KD
Subjt:  GRRRLSPPPSHATSAGNRKKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTTGAGTCTCAGACTCCAGATGGAGCCAATTCTACTCTGTC
ACCGCCTATTGTGTCGCCGCCGATACCTTCTCCACCGCCTCCTTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCTCCACCACCCCCGCCTCCGCCTCCAT
CGTCATCTCCACCTCCATTTTCCCCACCGCCTCCATTTCCACCGCCTCCTCCGCCGGGTCGCCGTCGTCTTAGTCCACCGCCCTCTCATGCAACCTCCGCAGGGAATAGA
AAAAAATCACCACCAGTGCCTCCGAATAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAATAACGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGT
CCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTTGAGTCTCAGACTCCAGATGGAGCCAATTCTACTCTGTC
ACCGCCTATTGTGTCGCCGCCGATACCTTCTCCACCGCCTCCTTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCTCCACCACCCCCGCCTCCGCCTCCAT
CGTCATCTCCACCTCCATTTTCCCCACCGCCTCCATTTCCACCGCCTCCTCCGCCGGGTCGCCGTCGTCTTAGTCCACCGCCCTCTCATGCAACCTCCGCAGGGAATAGA
AAAAAATCACCACCAGTGCCTCCGAATAACATCAATACTAATCAAGGGTCGAAGCGAAGTCTCAATAACGGGAAGAAAGTTGGGCTGTTCTTTGTAGGTATTGCCGCAGT
CCTCCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTCCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
Protein sequenceShow/hide protein sequence
MERPLTTLIFVISGFAFSVLSLLVESQTPDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPSSSPPPFSPPPPFPPPPPPGRRRLSPPPSHATSAGNR
KKSPPVPPNNINTNQGSKRSLNNGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS