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ClCG07G014110 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G014110
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGlutamate--tRNA ligase
Genome locationCG_Chr07:30603029..30603388
RNA-Seq ExpressionClCG07G014110
SyntenyClCG07G014110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]2.0e-4591.23Show/hide
Query:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMMLIL
        MDSNY AY NQNSS RPLAIVLALASAV LSPLRSYETSWSSGFV+PLVLLGLIIAIKTSS CSSTSRDSAIL SD PSWVLK GSSSWGLAGILMMLIL
Subjt:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMMLIL

Query:  GLSWQNSVQEFLWR
        GLSWQ+SVQEFLWR
Subjt:  GLSWQNSVQEFLWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]1.1e-4892.31Show/hide
Query:  PKTMDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMM
        PK MDSNY AYANQNSSQRPLAI LALASAVVLSPLRSYETSWSSGFV+PLVLLGLI+AIKTSSSCSSTSRDSAIL SD PSWVLK GSSSWGLAGILMM
Subjt:  PKTMDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMM

Query:  LILGLSWQNSVQEFLWR
        LILGLSWQ+SVQEFLWR
Subjt:  LILGLSWQNSVQEFLWR

KAF7814039.1 hypothetical protein G2W53_028008 [Senna tora]4.0e-3063.2Show/hide
Query:  TMDSNYGAYANQNSSQRPLAIVLALASAVVLSPL-----------RSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSDPSWVLKTGSSSW
        T  + Y AY++Q SSQR LA+VLALASAVVLSPL           R YE+ WS GFVLP++L GLIIAI+TSSS SST R S + S +PSWVL+ GSSSW
Subjt:  TMDSNYGAYANQNSSQRPLAIVLALASAVVLSPL-----------RSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSDPSWVLKTGSSSW

Query:  GLAGILMMLILGLSWQNSVQEFLWR
        GLAG+L+ML+L L WQ SVQEF WR
Subjt:  GLAGILMMLILGLSWQNSVQEFLWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]3.1e-4385.59Show/hide
Query:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS-----RDSAILSSDPSWVLKTGSSSWGLAGILM
        MDSNYGAY NQ SSQRPLAIVLALASAVVLSPLR YE+ WSSGFVLPLVLL LIIAIKTSSSCSS S     RDSAILSSDPSWVLK GSSSWGLAG+LM
Subjt:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS-----RDSAILSSDPSWVLKTGSSSWGLAGILM

Query:  MLILGLSWQNSVQEFLWR
        MLI GLSWQ+SV+EFLWR
Subjt:  MLILGLSWQNSVQEFLWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]4.0e-3068.64Show/hide
Query:  YANQNSSQRPLAIVLALASAVVLSPL--------RSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS----RDSAILSSDPSWVLKTGSSSWGLAGILM
        Y +Q SSQR +A+VLAL SA+VLSPL        R YET WSSGFVLP+VL GLIIAIKT+SSCSS S    R S I S DPSWVL+ GSSSWGLAGIL+
Subjt:  YANQNSSQRPLAIVLALASAVVLSPL--------RSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS----RDSAILSSDPSWVLKTGSSSWGLAGILM

Query:  MLILGLSWQNSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQNSVQEFLWR

TrEMBL top hitse value%identityAlignment
A0A067KX22 Uncharacterized protein1.9e-3066.95Show/hide
Query:  YGAYANQNSSQRPLAIVLALASAVVLSP---------LRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSDPSWVLKTGSSSWGLAGILM
        Y  Y++QNSSQR LA+VLAL SAVVLSP         LR YET WSSGFVLP+VL GLIIAI+T+S+ S   R+S I   DPSWVL+ GSSSWGLAGIL+
Subjt:  YGAYANQNSSQRPLAIVLALASAVVLSP---------LRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSDPSWVLKTGSSSWGLAGILM

Query:  MLILGLSWQNSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQNSVQEFLWR

A0A0A0LEN3 Uncharacterized protein1.0e-4792.98Show/hide
Query:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMMLIL
        MDSNY AYANQNSSQRPLAI LALASAVVLSPLRSYETSWSSGFV+PLVLLGLI+AIKTSSSCSSTSRDSAIL SD PSWVLK GSSSWGLAGILMMLIL
Subjt:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMMLIL

Query:  GLSWQNSVQEFLWR
        GLSWQ+SVQEFLWR
Subjt:  GLSWQNSVQEFLWR

A0A2N9IBH6 Uncharacterized protein4.7e-2965.55Show/hide
Query:  YANQNSSQRPLAIVLALASAVVLSPLRS--------YETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS-----RDSAILSSDPSWVLKTGSSSWGLAGIL
        Y  Q SSQR +A+VL+L SA+VLSPL +        YET WSSGFVLP+VL+GLIIAI+T+SSCSS S     R S I S DPSWVL+ GSSSWGLAGIL
Subjt:  YANQNSSQRPLAIVLALASAVVLSPLRS--------YETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS-----RDSAILSSDPSWVLKTGSSSWGLAGIL

Query:  MMLILGLSWQNSVQEFLWR
        +ML+L LSWQ SVQEF WR
Subjt:  MMLILGLSWQNSVQEFLWR

A0A5A7UY99 Putative transmembrane protein9.5e-4691.23Show/hide
Query:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMMLIL
        MDSNY AY NQNSS RPLAIVLALASAV LSPLRSYETSWSSGFV+PLVLLGLIIAIKTSS CSSTSRDSAIL SD PSWVLK GSSSWGLAGILMMLIL
Subjt:  MDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSD-PSWVLKTGSSSWGLAGILMMLIL

Query:  GLSWQNSVQEFLWR
        GLSWQ+SVQEFLWR
Subjt:  GLSWQNSVQEFLWR

A0A7N2LMQ6 Uncharacterized protein1.9e-3068.64Show/hide
Query:  YANQNSSQRPLAIVLALASAVVLSPL--------RSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS----RDSAILSSDPSWVLKTGSSSWGLAGILM
        Y +Q SSQR +A+VLAL SA+VLSPL        R YET WSSGFVLP+VL GLIIAIKT+SSCSS S    R S I S DPSWVL+ GSSSWGLAGIL+
Subjt:  YANQNSSQRPLAIVLALASAVVLSPL--------RSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTS----RDSAILSSDPSWVLKTGSSSWGLAGILM

Query:  MLILGLSWQNSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQNSVQEFLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACCCCAAAACCATGGATAGTAACTATGGCGCTTACGCGAACCAAAACTCGTCTCAGAGACCACTGGCCATCGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTC
GCCATTAAGATCCTATGAAACCAGTTGGAGCTCTGGATTTGTTCTTCCATTGGTTCTTTTGGGGCTTATAATTGCCATTAAGACATCATCGTCTTGCTCATCCACGTCCA
GAGATTCTGCCATTCTGTCTTCAGATCCTTCATGGGTTCTTAAAACTGGGAGCTCCTCTTGGGGCCTTGCAGGGATTTTAATGATGTTGATTCTTGGGCTTTCTTGGCAA
AATTCTGTTCAAGAATTCCTCTGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAACCCCAAAACCATGGATAGTAACTATGGCGCTTACGCGAACCAAAACTCGTCTCAGAGACCACTGGCCATCGTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTC
GCCATTAAGATCCTATGAAACCAGTTGGAGCTCTGGATTTGTTCTTCCATTGGTTCTTTTGGGGCTTATAATTGCCATTAAGACATCATCGTCTTGCTCATCCACGTCCA
GAGATTCTGCCATTCTGTCTTCAGATCCTTCATGGGTTCTTAAAACTGGGAGCTCCTCTTGGGGCCTTGCAGGGATTTTAATGATGTTGATTCTTGGGCTTTCTTGGCAA
AATTCTGTTCAAGAATTCCTCTGGAGATAG
Protein sequenceShow/hide protein sequence
MINPKTMDSNYGAYANQNSSQRPLAIVLALASAVVLSPLRSYETSWSSGFVLPLVLLGLIIAIKTSSSCSSTSRDSAILSSDPSWVLKTGSSSWGLAGILMMLILGLSWQ
NSVQEFLWR