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ClCG07G015460 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG07G015460
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCiliary neurotrophic factor
Genome locationCG_Chr07:31941907..31948457
RNA-Seq ExpressionClCG07G015460
SyntenyClCG07G015460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044571.1 uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa]1.6e-6076.63Show/hide
Query:  MELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKELKEM
        MELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    ++QE  +IIET+LE   E ++ERS  +VKTE EIVKELKE+
Subjt:  MELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKELKEM

Query:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD
        K+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD D
Subjt:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD

KAE8649098.1 hypothetical protein Csa_015237 [Cucumis sativus]1.0e-5978.26Show/hide
Query:  MELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLE-PRSEDIERSGSRVKTEKEIVKELK
        MELISLAIRRLME+N  RT SHRSS  DADAD DD+QLLSRLLS+VES R EQRLNHS    +QE  +IIET+LE  R  ++ERS  ++KTE EIVKELK
Subjt:  MELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLE-PRSEDIERSGSRVKTEKEIVKELK

Query:  EMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFD
        E+K+QNFITHCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSL  ILKRKTTSAIQ QIEATELPHLN+PALPHV LP+FD
Subjt:  EMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFD

XP_004152113.1 uncharacterized protein LOC101214522 [Cucumis sativus]5.4e-6178.12Show/hide
Query:  MAEAAE-EMELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLE-PRSEDIERSGSRVKTE
        MAEAA  EMELISLAIRRLME+N  RT SHRSS  DADAD DD+QLLSRLLS+VES R EQRLNHS    +QE  +IIET+LE  R  ++ERS  ++KTE
Subjt:  MAEAAE-EMELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLE-PRSEDIERSGSRVKTE

Query:  KEIVKELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFD
         EIVKELKE+K+QNFITHCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSL  ILKRKTTSAIQ QIEATELPHLN+PALPHV LP+FD
Subjt:  KEIVKELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFD

XP_008454012.1 PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]6.3e-6276.6Show/hide
Query:  AAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKE
        A EEMELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    ++QE  +IIET+LE   E ++ERS  +VKTE EIVKE
Subjt:  AAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKE

Query:  LKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD
        LKE+K+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD D
Subjt:  LKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD

XP_038895500.1 uncharacterized protein LOC120083719 [Benincasa hispida]3.1e-7786.46Show/hide
Query:  MAEAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSEDIERSG-SRVKTEKEI
        MAEA EEMELISLAIRRLME++D RTASHRSS ADA   DLQLLSRLLSQVES REEQRLNHSQIS QQ+ EKIIET+LEP+SE++ERSG +RVK EK I
Subjt:  MAEAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSEDIERSG-SRVKTEKEI

Query:  VKELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK
        VKELKE+KRQNFITHCLVSAMIILTVAWQ+SEVSFILKLR+GLSNPFKSLG ILKRKTTSAIQ QIEATELPHLNMPALPHVNLPEFDLDG+
Subjt:  VKELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein2.6e-6178.12Show/hide
Query:  MAEAAE-EMELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLE-PRSEDIERSGSRVKTE
        MAEAA  EMELISLAIRRLME+N  RT SHRSS  DADAD DD+QLLSRLLS+VES R EQRLNHS    +QE  +IIET+LE  R  ++ERS  ++KTE
Subjt:  MAEAAE-EMELISLAIRRLMEKNDKRTASHRSS--DADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLE-PRSEDIERSGSRVKTE

Query:  KEIVKELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFD
         EIVKELKE+K+QNFITHCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSL  ILKRKTTSAIQ QIEATELPHLN+PALPHV LP+FD
Subjt:  KEIVKELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFD

A0A1S3BXR6 uncharacterized protein LOC1034945623.1e-6276.6Show/hide
Query:  AAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKE
        A EEMELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    ++QE  +IIET+LE   E ++ERS  +VKTE EIVKE
Subjt:  AAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKE

Query:  LKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD
        LKE+K+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD D
Subjt:  LKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD

A0A5A7TSP6 Uncharacterized protein7.5e-6176.63Show/hide
Query:  MELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKELKEM
        MELISLAIRRLME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    ++QE  +IIET+LE   E ++ERS  +VKTE EIVKELKE+
Subjt:  MELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKELKEM

Query:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD
        K+QNF+THCLVSAMIILTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD D
Subjt:  KRQNFITHCLVSAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD

A0A5D3CZN3 Uncharacterized protein1.6e-5575.14Show/hide
Query:  MEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKELKEMKRQNFITHCLV
        ME+N  RT SHRSSD D D DD+QLLS+LLS+VES REEQRLNH    ++QE  +IIET+LE   E ++ERS  +VKTE EIVKELKE+K+QNF+THCLV
Subjt:  MEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSE-DIERSGSRVKTEKEIVKELKEMKRQNFITHCLV

Query:  SAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD
        SAMIILTVAWQISEVSFILKLRDG LSNPFKSLG ILKRKTTSAIQ QIEATELP LN+PA+PHV+LP+FD D
Subjt:  SAMIILTVAWQISEVSFILKLRDG-LSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLD

A0A6J1CVQ0 uncharacterized protein LOC1110147252.4e-5171.1Show/hide
Query:  EKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSEDIERSGSRVKTEKE-IVKELKEMKRQNFITHCLVS
        EKN    ASHRSS A    DDL LLSRLLSQVES REEQR  HSQ+S QQ              ED+ERS ++V+ E+E +VKEL+E+KRQNFITHCLVS
Subjt:  EKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSEDIERSGSRVKTEKE-IVKELKEMKRQNFITHCLVS

Query:  AMIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK
        AMIILTVAWQ+SEVSFILKLR GLSNPFKSL +ILK+KTTSAI  QIEATELPHLNMPALPHV+LP+FDLDG+
Subjt:  AMIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein9.5e-1639.47Show/hide
Query:  EAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIET-DLEPRSEDIERSGSRVKTEKEIVK
        E++E++E +S AI +L+ +  KR AS  +   DADD     LS L+SQ+ES   + +     + T +E EK  E+ D  P     E      ++ +EI K
Subjt:  EAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIET-DLEPRSEDIERSGSRVKTEKEIVK

Query:  ELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGRIL
        ++K++K+QN ITH L+SA IILT+ WQ+SE S I  L+D +S+P +S+G +L
Subjt:  ELKEMKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGRIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGACTGATGGAGAAGAACGACAAAAGAACCGCCTCTCATCGGAGCTCCGACGCCGAT
GCCGACGATGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTGGAATCAATAAGAGAAGAACAGAGGCTTAACCACTCCCAAATCTCAACTCAGCAAGAG
TATGAGAAAATAATTGAGACAGACTTAGAGCCTCGAAGTGAAGATATAGAAAGAAGTGGAAGCAGAGTGAAAACAGAGAAGGAGATAGTGAAAGAGCTAAAAGAA
ATGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCTTGGCAAATCTCTGAGGTATCTTTCATTTTGAAACTCAGAGAT
GGTTTGAGCAATCCATTCAAATCCCTGGGTAGAATTCTGAAAAGGAAGACAACTTCAGCAATACAACAACAGATTGAAGCTACTGAATTGCCTCATCTTAATATG
CCTGCCCTACCTCATGTGAACCTACCAGAGTTTGACTTGGATGGAAAATAA
mRNA sequenceShow/hide mRNA sequence
AAAGCAAAGAAAGTTGAGGAAGAAAAGAATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTGTTCCTTCTTCTATCACCAGGTCTTCTCTTTCAGGTCCC
TGCCCACCATCAATTCCTTCAGTTCGGTAACTTCCAAACCAGCGGCGCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGT
CATTCAACTTCACATCTACATCTGATCTGATTAATTTCCCCTAATCCCTAATCCCTAATCCCAATCGCACCCAGTTTCCTCATCCATTTCCAATTTCCAGATATT
TAAACGAGAATTGAATACTTGTTTGAAAAGAGGACGGAAGAATGACAGCAGACCATTTGAAAGACAACACGTTTCAAAGAGCAATTGGAGAATGTTCATAAGAAG
TGGTATGATTTGATTTGTTGCCGAGAATAAAAAGAAAAAGGGATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGACTGATGGAGAAG
AACGACAAAAGAACCGCCTCTCATCGGAGCTCCGACGCCGATGCCGACGATGACGATCTGCAACTTCTTTCCCGATTACTCTCTCAGGTGGAATCAATAAGAGAA
GAACAGAGGCTTAACCACTCCCAAATCTCAACTCAGCAAGAGTATGAGAAAATAATTGAGACAGACTTAGAGCCTCGAAGTGAAGATATAGAAAGAAGTGGAAGC
AGAGTGAAAACAGAGAAGGAGATAGTGAAAGAGCTAAAAGAAATGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCAGCAATGATTATCCTCACTGTTGCT
TGGCAAATCTCTGAGGTATCTTTCATTTTGAAACTCAGAGATGGTTTGAGCAATCCATTCAAATCCCTGGGTAGAATTCTGAAAAGGAAGACAACTTCAGCAATA
CAACAACAGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGAACCTACCAGAGTTTGACTTGGATGGAAAATAATACCTGATCTAC
AAAGCCACCAATCAATGATAGCTTCATCAAGATCACCCAAGTTGTTTCATTGGATGTGCAGCTCTTTGATTTAATTTTCTAGTCACAACCAAACATTTCAACAAC
TTTGTAGATCTATGTATTAGTTGTTTAAAGGAAAAGATGACAATGAAACCCTGTATTTTTTGGGCACAGCGCGTTGTGTGTCGTTACTGCTTTCATTTTGGACAT
TCATATTTCAATTTCCATGCCGTAGAAGTTTAAAGCTGT
Protein sequenceShow/hide protein sequence
MAEAAEEMELISLAIRRLMEKNDKRTASHRSSDADADDDDLQLLSRLLSQVESIREEQRLNHSQISTQQEYEKIIETDLEPRSEDIERSGSRVKTEKEIVKELKE
MKRQNFITHCLVSAMIILTVAWQISEVSFILKLRDGLSNPFKSLGRILKRKTTSAIQQQIEATELPHLNMPALPHVNLPEFDLDGK