CuGenDBv2

Gene ID	ClCG07G016140
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	biogenesis of lysosome-related organelles complex 1 subunit 2
Genome location	CG_Chr07:32544265..32546767
RNA-Seq Expression	ClCG07G016140
Synteny	ClCG07G016140
Gene Ontology terms	NA
InterPro domains	IPR019269 - Biogenesis of lysosome-related organelles complex-1, subunit 2

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036775.1 Kanadaptin [Cucurbita argyrosperma subsp. argyrosperma]

7.1e-42

87.16

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Query:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+ EE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MN+RVAEEYKG GDVASGM+VFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSI
        SMLDKH+S+
Subjt:  SMLDKHVSI

XP_004137147.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus]

6.2e-46

93.52

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Query:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQ EE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMNLRVAEEYKGFGDVASGM+VFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSI
        MLDKHVS+
Subjt:  MLDKHVSI

XP_008455567.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo]

4.8e-46

93.52

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Query:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQ EE+LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN RVAEEYKG+GDVASGM+VFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
Subjt:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSI
        MLDKHVS+
Subjt:  MLDKHVSI

XP_022949044.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata]

4.2e-42

88.07

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Query:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+ EE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGM+VFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSI
        SMLDKH+S+
Subjt:  SMLDKHVSI

XP_038880795.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida]

7.3e-47

95.37

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Query:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQ EEQ PNRDELAESLNEFFTSVSEMIKSDLLGSSNQL LLERMNLRVAEEYKGFGDVASGM+VFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
Subjt:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSI
        MLDKHVS+
Subjt:  MLDKHVSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KW18 Uncharacterized protein

3.0e-46

93.52

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Query:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQ EE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMNLRVAEEYKGFGDVASGM+VFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSI
        MLDKHVS+
Subjt:  MLDKHVSI

A0A1S3C0T0 biogenesis of lysosome-related organelles complex 1 subunit 2

2.3e-46

93.52

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Query:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
        MAQ EE+LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN RVAEEYKG+GDVASGM+VFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS
Subjt:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVIS

Query:  MLDKHVSI
        MLDKHVS+
Subjt:  MLDKHVSI

A0A6J1DL99 biogenesis of lysosome-related organelles complex 1 subunit 2 isoform X4

1.5e-34

89.01

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Query:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQ
        MA  EEQLPNRDELA SLNEFFTSVS+MIKSDLLGSSNQL LLE+MNLRVAEEYKGFGDVASGM+VFVEQLKSKSGGFD YI QIE IEHQ
Subjt:  MAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQ

A0A6J1GBP4 biogenesis of lysosome-related organelles complex 1 subunit 2

2.0e-42

88.07

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Query:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+ EE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGM+VFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSI
        SMLDKH+S+
Subjt:  SMLDKHVSI

A0A6J1KEZ0 biogenesis of lysosome-related organelles complex 1 subunit 2

2.0e-42

88.07

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Query:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI
        MA+ EE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKG GDVASGM+VFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVI
Subjt:  MAQNEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVI

Query:  SMLDKHVSI
        SMLDKH+S+
Subjt:  SMLDKHVSI

SwissProt top hits

e value

%identity

Alignment

F4K657 Biogenesis of lysosome-related organelles complex 1 subunit 2

9.4e-29

63.64

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Query:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSI
        +RD+LAESL   FTSVS M+KS+L G++N L LLE+MNLRVA EY   GDVA+G++VF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+
Subjt:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSI

Q54Y67 Biogenesis of lysosome-related organelles complex 1 subunit 2

1.4e-08

33.67

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Query:  LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKH
        LP  ++L  S  E FT VS  IKS+L  + +   LL +MN   + +Y+   +V  G+ VF+  LK K   F  Y  +I +++  VT+ E  + +LD++
Subjt:  LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKH

Arabidopsis top hits

e value

%identity

Alignment

AT5G49550.1 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.

6.7e-30

63.64

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Query:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSI
        +RD+LAESL   FTSVS M+KS+L G++N L LLE+MNLRVA EY   GDVA+G++VF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+
Subjt:  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSI

Sequences

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CDS sequence

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ATGCATCTGGTTCGGTGTCCCGACGAGGCGACGGCTGGTGATCACAATTCCAGGAACAAAGAAGTTTCCCGGCCGCAGGTACCGTATTTGCAAAATTCACGGTTG
GAATCTTATTTCATGGCCCAGAACGAGGAGCAATTACCGAACAGGGACGAGCTCGCCGAGTCGCTTAACGAATTCTTCACCAGCGTATCTGAAATGATCAAATCG
GATCTTCTTGGATCAAGTAATCAGCTGACACTTTTAGAGAGAATGAACCTCAGGGTGGCAGAAGAGTATAAAGGTTTTGGCGATGTGGCTTCTGGAATGAAGGTT
TTTGTGGAGCAACTAAAGTCAAAGAGTGGTGGGTTTGATGAGTATATACACCAAATTGAGAAAATAGAACATCAGGTGACTGAATTTGAAGCTGTAATTTCAATG
CTTGATAAGCATGTTTCCATAACAATTGTTTTCTTAATGATTTTGCTTCTATATTGCTGCTCATTGTCGAATCCTTTTATGATATCTTATTCATTGGAAGTTGAT
GGCGCAAAAGAGTTGGCATCTTGTTTCCCTTCCTGCTAA

mRNA sequence

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Protein sequence

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MHLVRCPDEATAGDHNSRNKEVSRPQVPYLQNSRLESYFMAQNEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLTLLERMNLRVAEEYKGFGDVASGMKV
FVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSITIVFLMILLLYCCSLSNPFMISYSLEVDGAKELASCFPSC

ClCG07G016140 (gene) of Watermelon (Charleston Gray) v2.5 genome