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ClCG08G001490 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G001490
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionphosphatase and actin regulator 4A-like
Genome locationCG_Chr08:2935743..2939063
RNA-Seq ExpressionClCG08G001490
SyntenyClCG08G001490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDJ50594.1 nuclear NF-kB activating protein, putative [Eimeria brunetti]4.3e-0641.86Show/hide
Query:  KSGKKLLGRGER---DREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDRE
        + G + L R ER   DRE  +R  GD    GDRE+ + E+  R +G+RE+ +R+  R  +REKGDRE+G+ E+  R R ERD+ +RE       R GDRE
Subjt:  KSGKKLLGRGER---DREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDRE

Query:  ESETERRVRLRGEREESERQQCRRE--EREKGDRE----EGETERRGRPRGERDREERERLTGDGCR-IGDREESETKRRGRSRGERDREESERRGRGSG
          + ER  R  G+RE+ +R++  RE  +REKGDRE    E + ERR R R +R+R +RER    G R  GDRE+ + +R G S G+R+RE    R R  G
Subjt:  ESETERRVRLRGEREESERQQCRRE--EREKGDRE----EGETERRGRPRGERDREERERLTGDGCR-IGDREESETKRRGRSRGERDREESERRGRGSG

Query:  VCERRGRVRSERESQ
          E+  R + +RE++
Subjt:  VCERRGRVRSERESQ

KAF3856973.1 hypothetical protein F7725_008832 [Dissostichus mawsoni]4.6e-0849.27Show/hide
Query:  ERDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRRE------EREKGDREEGETERRGRPRGERDRE-ERERL-TGDGCRIGDREESETE
        ERDRE RER T    R G+RE    ER  R RGERE  ER++ R E      ERE+ +REE   ER  R RGER+RE ERER  T  G R  +REE + E
Subjt:  ERDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRRE------EREKGDREEGETERRGRPRGERDRE-ERERL-TGDGCRIGDREESETE

Query:  RRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESER--RGRGSGVCERRGRVRS
        R    RGEREE E ++  REER++  RE GE +R  R RG+RDREERER          RE    +R  R RGER+RE  ER  R RG    ER  R R 
Subjt:  RRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESER--RGRGSGVCERRGRVRS

Query:  ERESQ
         RE Q
Subjt:  ERESQ

KAF3856976.1 hypothetical protein F7725_008835 [Dissostichus mawsoni]1.6e-0545.45Show/hide
Query:  REERGVIYLKSGKKLLGRGE---RDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCR--REEREKGDREEGETERRGRPRGERDREERERL
        REER     + G++   RGE   RDRE+RER         DREE E +R+   RGERE   R++ R    ERE+ DRE  ETERR R R +R+REERER 
Subjt:  REERGVIYLKSGKKLLGRGE---RDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCR--REEREKGDREEGETERRGRPRGERDREERERL

Query:  TGDGCRIGDREESETERRVRLRGEREESERQQCRRE-EREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERR
         G+  R     E+ETERR R R ERE  ER + RRE +RE+  REE E ER+ R R ER+R ERER   D  R  +REE+ET+R  +   +R+RE  ER 
Subjt:  TGDGCRIGDREESETERRVRLRGEREESERQQCRRE-EREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERR

Query:  GRGSGVCERRGRVRSERESQ
                 RG    ER+ +
Subjt:  GRGSGVCERRGRVRSERESQ

XP_022524211.1 trichohyalin-like, partial [Astyanax mexicanus]1.5e-0645.93Show/hide
Query:  ERDREDRERLTGDGCRIGDREESETERRVRLRGERE-----------ESERQQCRRE-EREKGDREEGETERRGRPRGERDREERERLTGD--GCRIGDR
        ER+RE+RER   +  R  +RE  E ERR R R ERE           E ER++  RE EREK +REE E E R R   ER+REERER   +       +R
Subjt:  ERDREDRERLTGDGCRIGDREESETERRVRLRGERE-----------ESERQQCRRE-EREKGDREEGETERRGRPRGERDREERERLTGD--GCRIGDR

Query:  EESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERRGRGSGVCERRG
        E+ E E+R R   EREE ER++ R  EREK +REE E ERR R + ER+REERER   +     +R E E +R  R R +R+REE ER  R     ER  
Subjt:  EESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERRGRGSGVCERRG

Query:  RVRSERESQ
        R R ERE +
Subjt:  RVRSERESQ

XP_038816833.1 trichohyalin-like, partial [Salvelinus namaycush]3.3e-0646.04Show/hide
Query:  RGERD-REDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREE-GETERR---GRPRGERDREERERLTGDGCRIGDREESETER
        RGER+ R ++ER   +G + G+RE  + E R R   ERE  ER++ +R ERE+G+RE+ GE ERR   GR RGER+R +RE    +    G+RE  E +R
Subjt:  RGERD-REDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREE-GETERR---GRPRGERDREERERLTGDGCRIGDREESETER

Query:  RVRLRGEREESER-QQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESE-TKRRGRSRGERDREESERRGRGSGVCERRGRVRSE
          R RGERE+ +R ++ RREER++G+RE GE E   + RGER+R ERER        G+REE E  ++  R R E++R E ERR RG     R GR R E
Subjt:  RVRLRGEREESER-QQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESE-TKRRGRSRGERDREESERRGRGSGVCERRGRVRSE

Query:  RE
        +E
Subjt:  RE

TrEMBL top hitse value%identityAlignment
A0A1Q9LJI1 Uncharacterized protein3.4e-0440Show/hide
Query:  RGERDREDRERLTGDGCRIGDREESETERRVRLRGERE--ESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETERRVR
        R ER+R+DRER         DRE  E ER+ R R ERE  E E+Q+  R+EREK +RE  E ER+ R R ER+++ERER      +  +R+E E + R R
Subjt:  RGERDREDRERLTGDGCRIGDREESETERRVRLRGERE--ESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETERRVR

Query:  LRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGC-----------RIGDREESETKRRGRSRGERDREESERRGRGSGVCERR
           E++E ERQ+  ++EREK +RE+ E ER+ R + ER+R+ERE+   +             R  +++  E +R  R R +R+R+E ER  +     ER+
Subjt:  LRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGC-----------RIGDREESETKRRGRSRGERDREESERRGRGSGVCERR

Query:  GRVRSERESQ
         R R+ERE Q
Subjt:  GRVRSERESQ

A0A7J5Z1A0 Uncharacterized protein9.8e-0442.99Show/hide
Query:  RGERDREDRERLTGDGCRIGDREESETERRV---RLRGEREESERQQCRREEREKGDREE--------------GETERRGRPRGERDREERERLTGDGC
        R E++R +RER    G R  +REE   E+R    R R EREE   ++ RREERE+ +R E              GE ERRG  + ER RE RER  G+  
Subjt:  RGERDREDRERLTGDGCRIGDREESETERRV---RLRGEREESERQQCRREEREKGDREE--------------GETERRGRPRGERDREERERLTGDGC

Query:  RIGDREESETERRVRLRGERE-ESERQQCRREEREKGDREEGET--ERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRG--ERDREESERR-
           +RE  E ERR R R E+E E  R++  REER  G+RE      ER+G  RGER+RE   R  G   R   R E E +  G  RG  ER+REE ERR 
Subjt:  RIGDREESETERRVRLRGERE-ESERQQCRREEREKGDREEGET--ERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRG--ERDREESERR-

Query:  -GRGSGVCERRGRVRSERESQ
             G   RRGR R ERE +
Subjt:  -GRGSGVCERRGRVRSERESQ

A0A7J5Z5S1 Uncharacterized protein8.0e-0645.45Show/hide
Query:  REERGVIYLKSGKKLLGRGE---RDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCR--REEREKGDREEGETERRGRPRGERDREERERL
        REER     + G++   RGE   RDRE+RER         DREE E +R+   RGERE   R++ R    ERE+ DRE  ETERR R R +R+REERER 
Subjt:  REERGVIYLKSGKKLLGRGE---RDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCR--REEREKGDREEGETERRGRPRGERDREERERL

Query:  TGDGCRIGDREESETERRVRLRGEREESERQQCRRE-EREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERR
         G+  R     E+ETERR R R ERE  ER + RRE +RE+  REE E ER+ R R ER+R ERER   D  R  +REE+ET+R  +   +R+RE  ER 
Subjt:  TGDGCRIGDREESETERRVRLRGEREESERQQCRRE-EREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERR

Query:  GRGSGVCERRGRVRSERESQ
                 RG    ER+ +
Subjt:  GRGSGVCERRGRVRSERESQ

A0A7J5Z609 Uncharacterized protein2.2e-0849.27Show/hide
Query:  ERDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRRE------EREKGDREEGETERRGRPRGERDRE-ERERL-TGDGCRIGDREESETE
        ERDRE RER T    R G+RE    ER  R RGERE  ER++ R E      ERE+ +REE   ER  R RGER+RE ERER  T  G R  +REE + E
Subjt:  ERDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRRE------EREKGDREEGETERRGRPRGERDRE-ERERL-TGDGCRIGDREESETE

Query:  RRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESER--RGRGSGVCERRGRVRS
        R    RGEREE E ++  REER++  RE GE +R  R RG+RDREERER          RE    +R  R RGER+RE  ER  R RG    ER  R R 
Subjt:  RRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESER--RGRGSGVCERRGRVRS

Query:  ERESQ
         RE Q
Subjt:  ERESQ

U6LPV0 Nuclear NF-kB activating protein, putative2.1e-0641.86Show/hide
Query:  KSGKKLLGRGER---DREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDRE
        + G + L R ER   DRE  +R  GD    GDRE+ + E+  R +G+RE+ +R+  R  +REKGDRE+G+ E+  R R ERD+ +RE       R GDRE
Subjt:  KSGKKLLGRGER---DREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDRE

Query:  ESETERRVRLRGEREESERQQCRRE--EREKGDRE----EGETERRGRPRGERDREERERLTGDGCR-IGDREESETKRRGRSRGERDREESERRGRGSG
          + ER  R  G+RE+ +R++  RE  +REKGDRE    E + ERR R R +R+R +RER    G R  GDRE+ + +R G S G+R+RE    R R  G
Subjt:  ESETERRVRLRGEREESERQQCRRE--EREKGDRE----EGETERRGRPRGERDREERERLTGDGCR-IGDREESETKRRGRSRGERDREESERRGRGSG

Query:  VCERRGRVRSERESQ
          E+  R + +RE++
Subjt:  VCERRGRVRSERESQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGAGAGAAGAGAGAGGAGTGATTTACTTGAAAAGTGGGAAGAAGTTACTTGGGAGAGGAGAGCGAGACCGAGAGGATAGGGAAAGGCTGACTGGTGATGGTTG
TCGGATCGGAGACCGAGAGGAGAGCGAGACCGAGAGGAGAGTGAGACTAAGAGGAGAGCGAGAGGAGAGCGAGAGGCAGCAGTGTAGGCGAGAGGAGAGGGAGAAGGGAG
ATCGAGAGGAAGGCGAGACTGAGAGGAGAGGGAGACCAAGAGGAGAGCGAGACCGAGAGGAGAGGGAGAGGTTGACTGGTGACGGCTGTCGGATCGGAGACCGAGAGGAG
AGCGAGACCGAGAGGAGAGTGAGACTAAGAGGAGAGCGAGAGGAGAGCGAGAGGCAGCAGTGTAGGCGAGAGGAGAGGGAGAAGGGAGATCGAGAGGAAGGCGAGACTGA
GAGGAGAGGGAGACCAAGAGGAGAGCGAGACCGAGAGGAGAGGGAGAGGTTGACTGGTGACGGCTGTCGGATCGGAGACCGAGAGGAGAGCGAGACCAAGAGGAGAGGGA
GATCGAGAGGAGAGCGAGACCGAGAGGAGAGCGAGAGGAGAGGGAGAGGCAGCGGCGTCTGCGAGAGGAGAGGGAGAGTCAGATCGGAGAGGGAAAGTCAGATCGGAGAC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGAGAGAAGAGAGAGGAGTGATTTACTTGAAAAGTGGGAAGAAGTTACTTGGGAGAGGAGAGCGAGACCGAGAGGATAGGGAAAGGCTGACTGGTGATGGTTG
TCGGATCGGAGACCGAGAGGAGAGCGAGACCGAGAGGAGAGTGAGACTAAGAGGAGAGCGAGAGGAGAGCGAGAGGCAGCAGTGTAGGCGAGAGGAGAGGGAGAAGGGAG
ATCGAGAGGAAGGCGAGACTGAGAGGAGAGGGAGACCAAGAGGAGAGCGAGACCGAGAGGAGAGGGAGAGGTTGACTGGTGACGGCTGTCGGATCGGAGACCGAGAGGAG
AGCGAGACCGAGAGGAGAGTGAGACTAAGAGGAGAGCGAGAGGAGAGCGAGAGGCAGCAGTGTAGGCGAGAGGAGAGGGAGAAGGGAGATCGAGAGGAAGGCGAGACTGA
GAGGAGAGGGAGACCAAGAGGAGAGCGAGACCGAGAGGAGAGGGAGAGGTTGACTGGTGACGGCTGTCGGATCGGAGACCGAGAGGAGAGCGAGACCAAGAGGAGAGGGA
GATCGAGAGGAGAGCGAGACCGAGAGGAGAGCGAGAGGAGAGGGAGAGGCAGCGGCGTCTGCGAGAGGAGAGGGAGAGTCAGATCGGAGAGGGAAAGTCAGATCGGAGAC
TGA
Protein sequenceShow/hide protein sequence
MNLREERGVIYLKSGKKLLGRGERDREDRERLTGDGCRIGDREESETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREE
SETERRVRLRGEREESERQQCRREEREKGDREEGETERRGRPRGERDREERERLTGDGCRIGDREESETKRRGRSRGERDREESERRGRGSGVCERRGRVRSERESQIGD