; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G001920 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G001920
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCG_Chr08:3955913..3958634
RNA-Seq ExpressionClCG08G001920
SyntenyClCG08G001920
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037190.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-15594.83Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSFSGASARSA SASSP T K VA+FGKKPAA  KPKPSAVSP NDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_004141516.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus]7.8e-15695.17Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKTVALFGKKPAAP+KPKPSA SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_008459494.1 PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo]1.3e-15595.52Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSFS  SA   PSASSPATFKTVALFGKKPAAPSKPKP+  SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022973438.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucurbita maxima]3.8e-15594.83Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLS SGASARSA SASSP T K VA+FGKKPAA  KPKPSAVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]2.1e-16198.28Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic3.8e-15695.17Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSF   S+RSAPS S+PATFKTVALFGKKPAAP+KPKPSA SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic6.4e-15695.52Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSFS  SA   PSASSPATFKTVALFGKKPAAPSKPKP+  SPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic3.9e-15394.14Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSF G S RSAPSASS  T KTVALFGKKPAA +KP  +AVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic7.1e-15594.83Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLSFSGASARSA SASSP T K VALFGKKPA   KPKPSAVSP NDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic1.9e-15594.83Show/hide
Query:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP
        + +A+STAAASLGVSEMLRNPLS SGASARSA SASSP T K VA+FGKKPAA  KPKPSAVSPVNDELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEVP
Subjt:  SDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVP

Query:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI
        GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYRI
Subjt:  GDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRI

Query:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  INGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic1.0e-5752.73Show/hide
Query:  SGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE
        S   AR+APS SS A F    +  +K AA  KP  S+ SP       WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E
Subjt:  SGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFE

Query:  LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPL
        +IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL
Subjt:  LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPL

Query:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        GLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27490 Chlorophyll a-b binding protein 8, chloroplastic2.8e-5551.69Show/hide
Query:  ALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAF
        A F  + +A +K   S+ SP       WYGPDR  +L        E P YL GE PGDYG+D  GLS  PE FSK +  E+IH+RWAMLGA G + PE  
Subjt:  ALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAF

Query:  NKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNG
        ++ G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YRI  G   E  D L+PGG FDPLGLADDP+  A LKVKE+KNG
Subjt:  NKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNG

Query:  RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        RLAMF+M GF+ QA VTG+GP+ENLA HLSDP  NN
Subjt:  RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic1.2e-5549.62Show/hide
Query:  SGASARSAPSASSPATFKTVALFG------KKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS
        S   A S+ + +  A     +LFG      +K AA +KP  S+ SP       WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+
Subjt:  SGASARSAPSASSPATFKTVALFG------KKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFS

Query:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPG
        K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YR+  G   E  D L+PG
Subjt:  KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPG

Query:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        G FDPLGLADDP+  A +KVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic1.5e-5649.58Show/hide
Query:  VALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEA
        +A  G K     + +   ++ V     ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE 
Subjt:  VALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEA

Query:  FNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEI
         +++      E VWFK GA +     LNY GN   I   ++I  +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEI
Subjt:  FNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEI

Query:  KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN
        KNGRLAMF+ LGF+ QA VTG+GPV+NL  HL+DP  N
Subjt:  KNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic8.4e-13784.7Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP ASSP+TFKTVALF KK  AP+K K  AVS  +DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 32.0e-5346.3Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +   +P+AS       V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 22.0e-5346.3Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G +   +P+AS       V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29930.1 chlorophyll A/B binding protein 11.2e-5346.3Show/hide
Query:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        +  S M  +  +F+G + + +P+AS       V +  +K  A  KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS
Subjt:  LGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--N
          PE F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG    
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--N

Query:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT2G05100.1 photosystem II light harvesting complex gene 2.15.9e-5354.29Show/hide
Query:  WYGPDRRIFLPEGLLDRSE-IPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
        WYGPDR    P+ L   SE  P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L
Subjt:  WYGPDRRIFLPEGLLDRSE-IPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL

Query:  NYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLA
        +Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL 
Subjt:  NYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLA

Query:  KHLSDPFGNN
         HL+DP  NN
Subjt:  KHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 55.9e-13884.7Show/hide
Query:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP ASSP+TFKTVALF KK  AP+K K  AVS  +DELAKWYGPDRRIFLP+GLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSPVNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATAGCTCACGTTATCCAAATCACTCAATCGGAGAGACCAACTTAAAGACCACATCTGCCACGTCCCCATACTCCACCAATCAAAACATTGCATTGGATTTCTC
AGCTTATGAGCAAAATCACAAACCTGAATCCGACGTGGCATCCTCCACCGCCGCCGCCTCCCTTGGCGTCTCCGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCT
CCGCTAGGTCAGCTCCCTCTGCTTCTAGCCCAGCTACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCTGCCGCACCATCCAAGCCAAAGCCCTCTGCCGTCTCCCCA
GTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACAGAAGGATTTTCTTGCCGGAAGGGCTGTTGGACCGATCGGAGATCCCTGAGTATTTGAACGGAGAAGTCCCCGG
CGACTATGGTTACGATCCCTTTGGACTCAGCAAGAAGCCAGAGGACTTCAGCAAATACCAAGCGTTTGAGTTGATTCATGCAAGATGGGCCATGCTTGGAGCTGCTGGTT
TCATCATCCCTGAGGCCTTCAACAAATTCGGAGCCAACTGCGGTCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAATACATTGAATTACTTTGGA
AACAACATTCCCATCAACCTCATCGTCGCGGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTTCA
CCCCGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAAGCAGCGATTTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCAATGTTTGCAATGCTAG
GGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCT
GAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATAGCTCACGTTATCCAAATCACTCAATCGGAGAGACCAACTTAAAGACCACATCTGCCACGTCCCCATACTCCACCAATCAAAACATTGCATTGGATTTCTC
AGCTTATGAGCAAAATCACAAACCTGAATCCGACGTGGCATCCTCCACCGCCGCCGCCTCCCTTGGCGTCTCCGAAATGCTGAGAAATCCTCTCAGCTTCTCCGGTGCCT
CCGCTAGGTCAGCTCCCTCTGCTTCTAGCCCAGCTACCTTCAAAACCGTTGCGCTTTTCGGGAAGAAGCCTGCCGCACCATCCAAGCCAAAGCCCTCTGCCGTCTCCCCA
GTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACAGAAGGATTTTCTTGCCGGAAGGGCTGTTGGACCGATCGGAGATCCCTGAGTATTTGAACGGAGAAGTCCCCGG
CGACTATGGTTACGATCCCTTTGGACTCAGCAAGAAGCCAGAGGACTTCAGCAAATACCAAGCGTTTGAGTTGATTCATGCAAGATGGGCCATGCTTGGAGCTGCTGGTT
TCATCATCCCTGAGGCCTTCAACAAATTCGGAGCCAACTGCGGTCCCGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAATACATTGAATTACTTTGGA
AACAACATTCCCATCAACCTCATCGTCGCGGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTTCA
CCCCGGAGGGCCGTTCGACCCATTGGGGTTAGCAGACGACCCGGACCAAGCAGCGATTTTGAAGGTGAAGGAGATCAAGAATGGGAGATTGGCAATGTTTGCAATGCTAG
GGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAACTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAACTTGCTCACAGTCATTTCTGGGAATGCT
GAAAGAGTTCCAACTCTTTAA
Protein sequenceShow/hide protein sequence
MVDSSRYPNHSIGETNLKTTSATSPYSTNQNIALDFSAYEQNHKPESDVASSTAAASLGVSEMLRNPLSFSGASARSAPSASSPATFKTVALFGKKPAAPSKPKPSAVSP
VNDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG
NNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNA
ERVPTL