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ClCG08G002080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G002080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSerine/threonine-protein kinase VRK1-like
Genome locationCG_Chr08:4383096..4383789
RNA-Seq ExpressionClCG08G002080
SyntenyClCG08G002080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_029376745.1 serine/threonine-protein kinase VRK1-like isoform X1 [Echeneis naucrates]4.4e-0638.2Show/hide
Query:  FGDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGH-----FGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
        +GD  + HQ YGD  + HQ +GD  +  Q +G    LHQ  GD  +LHQ   D H     +GD   LHQ +    + HQ +GD  + HQ
Subjt:  FGDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGH-----FGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
XP_029376746.1 serine/threonine-protein kinase VRK1-like isoform X2 [Echeneis naucrates]4.4e-0638.2Show/hide
Query:  FGDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGH-----FGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
        +GD  + HQ YGD  + HQ +GD  +  Q +G    LHQ  GD  +LHQ   D H     +GD   LHQ +    + HQ +GD  + HQ
Subjt:  FGDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGH-----FGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
XP_038887242.1 LWamide neuropeptides-like [Benincasa hispida]3.8e-1050.6Show/hide
Query:  GDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGHFGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
        G+ AK HQ +GD AKLHQ+  D+AK  QY G +V+LHQ+ GD  K HQ     + GD AK HQ+    AK HQ+ GD +K HQ
Subjt:  GDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGHFGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
TrEMBL top hitse value%identityAlignment
A0A665TGK9 Serine/threonine-protein kinase VRK1-like2.1e-0638.2Show/hide
Query:  FGDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGH-----FGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
        +GD  + HQ YGD  + HQ +GD  +  Q +G    LHQ  GD  +LHQ   D H     +GD   LHQ +    + HQ +GD  + HQ
Subjt:  FGDVAKLHQPYGDVAKLHQHFGDEAKLRQYFGVDVELHQHSGDGAKLHQQSRDGH-----FGDGAKLHQHFKYVAKMHQHFGDGKKLHQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAGGTCGGAGGACACGTCAAGTATAGATCGGCACTACGTCAATACGTCTTATTGGCACTATGTCAATACGCTCCCGTGTTCTTTACTGCGCTGGATCTTAAGGC
ACATCGGGTAAAGATTGGCACTACGTCAATATGCCCTCATGTTCCTTACTGCGCTAGGAGGCAGAGTTGCACCAACATTTTGGAGAGGAGGCAGAGGTGCACCAACCTTA
TGGAGAGGAGGCAGAGCTACACCAGCATATTTGGTGATGTAGCGAAGCTGCACCAACCTTATGGAGATGTAGCGAAGCTGCACCAACATTTTGGAGATGAAGCAAAGCTG
CGCCAATATTTTGGAGTGGATGTAGAGTTGCACCAACATTCTGGAGATGGAGCAAAATTGCACCAGCAGTCTAGAGATGGACATTTTGGAGATGGAGCAAAGCTGCACCA
GCATTTTAAATATGTAGCGAAGATGCACCAACATTTTGGAGATGGCAAGAAGCTGCACCAAACAATGCCCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAGGTCGGAGGACACGTCAAGTATAGATCGGCACTACGTCAATACGTCTTATTGGCACTATGTCAATACGCTCCCGTGTTCTTTACTGCGCTGGATCTTAAGGC
ACATCGGGTAAAGATTGGCACTACGTCAATATGCCCTCATGTTCCTTACTGCGCTAGGAGGCAGAGTTGCACCAACATTTTGGAGAGGAGGCAGAGGTGCACCAACCTTA
TGGAGAGGAGGCAGAGCTACACCAGCATATTTGGTGATGTAGCGAAGCTGCACCAACCTTATGGAGATGTAGCGAAGCTGCACCAACATTTTGGAGATGAAGCAAAGCTG
CGCCAATATTTTGGAGTGGATGTAGAGTTGCACCAACATTCTGGAGATGGAGCAAAATTGCACCAGCAGTCTAGAGATGGACATTTTGGAGATGGAGCAAAGCTGCACCA
GCATTTTAAATATGTAGCGAAGATGCACCAACATTTTGGAGATGGCAAGAAGCTGCACCAAACAATGCCCACCTAG
Protein sequenceShow/hide protein sequence
MLEVGGHVKYRSALRQYVLLALCQYAPVFFTALDLKAHRVKIGTTSICPHVPYCARRQSCTNILERRQRCTNLMERRQSYTSIFGDVAKLHQPYGDVAKLHQHFGDEAKL
RQYFGVDVELHQHSGDGAKLHQQSRDGHFGDGAKLHQHFKYVAKMHQHFGDGKKLHQTMPT