; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G003090 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G003090
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationCG_Chr08:7568350..7570126
RNA-Seq ExpressionClCG08G003090
SyntenyClCG08G003090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]3.7e-1225.78Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW  + ++ W G+ F + L+ +K+ +K+W K+ FG   + K +    +  +D  E   GLDN  ++ R  +   + D+   E+V+WRQ+ K++WA+D   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN
        N     R  SGR                                   R    K+  +G G       ++    ++L +  F ++ Y+ N  A    E  N
Subjt:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN

Query:  WNLISTEQVAALEAPFTELEIKQAI
        WN IS E+   L+ PF E E+K+A+
Subjt:  WNLISTEQVAALEAPFTELEIKQAI

CAN70928.1 hypothetical protein VITISV_016057 [Vitis vinifera]1.4e-1136.61Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW     + W GH F++ L+ +K  LK W K+TFG    +KT +L+E+  ID  E+   L +    +R  IK EL ++   E++ WRQK K+KW KD   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGR
        N     +  +GR
Subjt:  NGSEARRAGSGR

CAN78865.1 hypothetical protein VITISV_013346 [Vitis vinifera]5.7e-1324.59Show/hide
Query:  MIKDLLNKTNATFVILQETKLADND---------------PSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKTDIIFGRSFMTFDISIMSNKLLE
        M+KD L   N   V++QETK  + D                +L A    G ILI+ +  + + +EV+ G + +             + F +       + 
Subjt:  MIKDLLNKTNATFVILQETKLADND---------------PSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKTDIIFGRSFMTFDISIMSNKLLE

Query:  AISMPKTASM--DHFNKFIDDCSLIGPL--------------SQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEH
        ++  P + S+  D + +  D   L  PL              +   WW     + W GH F++ L+ +K  LK W K +FG    KK  +LN+L   D  
Subjt:  AISMPKTASM--DHFNKFIDDCSLIGPL--------------SQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEH

Query:  EEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKI
        E+  GL+     +R S K EL ++   E++ WRQK K+KW K+   N     +  +GR               E+E  RG                   +
Subjt:  EEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKI

Query:  GDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPFTELEIKQAI
          +    T++             L  F + Y+     S   E  +W+ IS E    L++PFTE EI +AI
Subjt:  GDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPFTELEIKQAI

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]8.2e-1225.89Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW  + ++ W G+ F + L+ +K+ +K+W K+ FG   + K +    +  +D  E   GLDN  ++ R  +   + D+   E+V+WRQ+ K++WA+D   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN
        N     R  SGR                                   R    K+  +G G       ++    ++L +  F ++ Y+ N  A    E  N
Subjt:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN

Query:  WNLISTEQVAALEAPFTELEIKQA
        WN IS E+   L+ PF E E+K+A
Subjt:  WNLISTEQVAALEAPFTELEIKQA

XP_020420593.1 uncharacterized protein LOC18774736 [Prunus persica]3.7e-1226.22Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW  + ++ W G+ F + L+ +K+ +K W K+ FG   + K +    +  +D  E   GLDN  ++ R  +  ++ D+   E+V+WRQ+ K++WA+D   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN
        N     R  SGR                                   R    K+  +G      D  ++    ++L +  F ++ Y+ N  A    E  N
Subjt:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN

Query:  WNLISTEQVAALEAPFTELEIKQAI
        WN IS E+   LE PF E E+K+A+
Subjt:  WNLISTEQVAALEAPFTELEIKQAI

TrEMBL top hitse value%identityAlignment
A0A438BQB2 Transposon TX1 uncharacterized 149 kDa protein6.8e-1224.68Show/hide
Query:  MIKDLLNKTNATFVILQETKLADND---------------PSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKT---------DIIFG-------R
        M+KD L   N   V++QETK  + D                +L A    G ILI+ +  + + +EV+ G + +    +           ++G       +
Subjt:  MIKDLLNKTNATFVILQETKLADND---------------PSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKT---------DIIFG-------R

Query:  SFMT--FDISIMSNKLLEAISMPKTASMDHFNKFIDDCSLI-GPL----------------SQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFG
         F    FDI  +   L+   S       DH+   +D    + GP                 +   WW     + W GH F++ L+ +K  LK W K +FG
Subjt:  SFMT--FDISIMSNKLLEAISMPKTASMDHFNKFIDDCSLI-GPL----------------SQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFG

Query:  CTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGY
            KK  +LN+L   D  E+  GL+     +R S K EL ++   E++ WRQK K+KW K+   N     +  +GR               E+E  RG 
Subjt:  CTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGY

Query:  PPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPFTELEIKQAI
                          +  +    T++             L  F + YT     S   E  +W+ IS E    L++PFTE EI +AI
Subjt:  PPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPFTELEIKQAI

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)4.0e-1225.89Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW  + ++ W G+ F + L+ +K+ +K+W K+ FG   + K +    +  +D  E   GLDN  ++ R  +   + D+   E+V+WRQ+ K++WA+D   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN
        N     R  SGR                                   R    K+  +G G       ++    ++L +  F ++ Y+ N  A    E  N
Subjt:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN

Query:  WNLISTEQVAALEAPFTELEIKQA
        WN IS E+   L+ PF E E+K+A
Subjt:  WNLISTEQVAALEAPFTELEIKQA

A0A5H2Y6K0 VIRB2-interacting protein 21.8e-1225.78Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW  + ++ W G+ F + L+ +K+ +K+W K+ FG   + K +    +  +D  E   GLDN  ++ R  +   + D+   E+V+WRQ+ K++WA+D   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN
        N     R  SGR                                   R    K+  +G G       ++    ++L +  F ++ Y+ N  A    E  N
Subjt:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN

Query:  WNLISTEQVAALEAPFTELEIKQAI
        WN IS E+   L+ PF E E+K+A+
Subjt:  WNLISTEQVAALEAPFTELEIKQAI

A5BCE8 Reverse transcriptase domain-containing protein2.7e-1324.59Show/hide
Query:  MIKDLLNKTNATFVILQETKLADND---------------PSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKTDIIFGRSFMTFDISIMSNKLLE
        M+KD L   N   V++QETK  + D                +L A    G ILI+ +  + + +EV+ G + +             + F +       + 
Subjt:  MIKDLLNKTNATFVILQETKLADND---------------PSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKTDIIFGRSFMTFDISIMSNKLLE

Query:  AISMPKTASM--DHFNKFIDDCSLIGPL--------------SQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEH
        ++  P + S+  D + +  D   L  PL              +   WW     + W GH F++ L+ +K  LK W K +FG    KK  +LN+L   D  
Subjt:  AISMPKTASM--DHFNKFIDDCSLIGPL--------------SQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEH

Query:  EEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKI
        E+  GL+     +R S K EL ++   E++ WRQK K+KW K+   N     +  +GR               E+E  RG                   +
Subjt:  EEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKI

Query:  GDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPFTELEIKQAI
          +    T++             L  F + Y+     S   E  +W+ IS E    L++PFTE EI +AI
Subjt:  GDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPFTELEIKQAI

M5W647 Reverse transcriptase domain-containing protein (Fragment)4.0e-1226.34Show/hide
Query:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG
        WW  + ++ W G+ F + L+ +K+ +K W K+ FG   + K +    +  +D  E   GLDN  ++ R  +  ++ D+   E+V+WRQ+ K++WA+D   
Subjt:  WWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVG

Query:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN
        N     R  SGR                                   R    K+  +G      D  ++    ++L +  F ++ Y+ N  A    E  N
Subjt:  NGSEARRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTES-YTPNKRASSLPEIDN

Query:  WNLISTEQVAALEAPFTELEIKQA
        WN IS E+   LE PF E E+K+A
Subjt:  WNLISTEQVAALEAPFTELEIKQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGGATCTTTTAAACAAGACCAATGCCACCTTTGTCATTCTTCAAGAGACCAAATTAGCCGATAATGACCCCTCTCTGGATGCAATTAACAAAGTTGGTGACAT
TCTCATTCTCTGTAATGATCCATCTACACAAGTTGATGAAGTCATAGAAGGGGTATACGACCTTCCAAGGCCAAAGACAGATATCATTTTTGGTAGGAGTTTTATGACCT
TTGACATCTCTATAATGAGCAATAAATTGTTAGAGGCGATTTCAATGCCAAAGACTGCTAGTATGGACCATTTCAACAAGTTCATTGATGATTGCTCCCTCATTGGCCCT
CTCTCTCAAATGACTTGGTGGCTTCGAAATCCCTTATCTAGTTGGGCTGGTCATGACTTTATTCAAACGCTTAAAAACCTTAAAAAGGTTTTGAAAATATGGATCAAAGA
TACTTTTGGGTGTACAAATACCAAAAAAACAGACTTGTTGAATGAGCTAAATCGAATTGATGAACATGAAGAAGCTCACGGGTTGGATAATGCTTACCAACAGAGGAGGA
ACTCTATAAAAACCGAATTGGTGGATATCACTTTCATGGAAAAAGTCAGGTGGAGGCAAAAATGCAAATTGAAATGGGCCAAAGATAGGGTTGGCAATGGGAGCGAGGCA
AGGCGGGCGGGGTCGGGGCGGGGATTCCCCGTCGGGGAAACATGTCCCCGTGGGGACCTATTCCCCGAGATAGAGCCGAGGCGAGGATACCCTCCCTGTCCCTGCCCTGT
CCCCGGACGAGTACCTAGAGAATGTCCCCATAAAATAGGGGATTCGGGTCGAGGCCGCACGGACAAGGACACAACCTTGTTGATGACTGCAACATTGAAGCTGAGTTTAT
CAACTTTTACCGAGAGCTATACACCAAACAAAAGGGCATCGAGCCTCCCTGAGATTGACAATTGGAACCTCATTTCTACTGAGCAAGTTGCTGCCTTGGAAGCACCTTTT
ACTGAACTAGAGATCAAGCAAGCTATTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGGATCTTTTAAACAAGACCAATGCCACCTTTGTCATTCTTCAAGAGACCAAATTAGCCGATAATGACCCCTCTCTGGATGCAATTAACAAAGTTGGTGACAT
TCTCATTCTCTGTAATGATCCATCTACACAAGTTGATGAAGTCATAGAAGGGGTATACGACCTTCCAAGGCCAAAGACAGATATCATTTTTGGTAGGAGTTTTATGACCT
TTGACATCTCTATAATGAGCAATAAATTGTTAGAGGCGATTTCAATGCCAAAGACTGCTAGTATGGACCATTTCAACAAGTTCATTGATGATTGCTCCCTCATTGGCCCT
CTCTCTCAAATGACTTGGTGGCTTCGAAATCCCTTATCTAGTTGGGCTGGTCATGACTTTATTCAAACGCTTAAAAACCTTAAAAAGGTTTTGAAAATATGGATCAAAGA
TACTTTTGGGTGTACAAATACCAAAAAAACAGACTTGTTGAATGAGCTAAATCGAATTGATGAACATGAAGAAGCTCACGGGTTGGATAATGCTTACCAACAGAGGAGGA
ACTCTATAAAAACCGAATTGGTGGATATCACTTTCATGGAAAAAGTCAGGTGGAGGCAAAAATGCAAATTGAAATGGGCCAAAGATAGGGTTGGCAATGGGAGCGAGGCA
AGGCGGGCGGGGTCGGGGCGGGGATTCCCCGTCGGGGAAACATGTCCCCGTGGGGACCTATTCCCCGAGATAGAGCCGAGGCGAGGATACCCTCCCTGTCCCTGCCCTGT
CCCCGGACGAGTACCTAGAGAATGTCCCCATAAAATAGGGGATTCGGGTCGAGGCCGCACGGACAAGGACACAACCTTGTTGATGACTGCAACATTGAAGCTGAGTTTAT
CAACTTTTACCGAGAGCTATACACCAAACAAAAGGGCATCGAGCCTCCCTGAGATTGACAATTGGAACCTCATTTCTACTGAGCAAGTTGCTGCCTTGGAAGCACCTTTT
ACTGAACTAGAGATCAAGCAAGCTATTACTTGA
Protein sequenceShow/hide protein sequence
MIKDLLNKTNATFVILQETKLADNDPSLDAINKVGDILILCNDPSTQVDEVIEGVYDLPRPKTDIIFGRSFMTFDISIMSNKLLEAISMPKTASMDHFNKFIDDCSLIGP
LSQMTWWLRNPLSSWAGHDFIQTLKNLKKVLKIWIKDTFGCTNTKKTDLLNELNRIDEHEEAHGLDNAYQQRRNSIKTELVDITFMEKVRWRQKCKLKWAKDRVGNGSEA
RRAGSGRGFPVGETCPRGDLFPEIEPRRGYPPCPCPVPGRVPRECPHKIGDSGRGRTDKDTTLLMTATLKLSLSTFTESYTPNKRASSLPEIDNWNLISTEQVAALEAPF
TELEIKQAIT