| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040843.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.9e-35 | 38.06 | Show/hide |
Query: RTYGLTSMMKIAQLVENRELTRNKACLR-----------------------ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFH
R GL MM AQLVENRE+ RN+A L+ + + N T P+RTITL+ + R+EG SRRL D EFQ+RR+KGLCF
Subjt: RTYGLTSMMKIAQLVENRELTRNKACLR-----------------------ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFH
Query: CDEQYSG-HKCTARDQKELRVLLIMENDEEWE----------------------------------------------------WLYTLGVTEVDWRNLS
C+E+YS HKC ++Q+ELR+ ++ N+EE E WLY+LGVT DW+NL+
Subjt: CDEQYSG-HKCTARDQKELRVLLIMENDEEWE----------------------------------------------------WLYTLGVTEVDWRNLS
Query: MVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALE
+ K+I +KGDPSLTKARVSLK ++K WE +D YLI+CR+++
Subjt: MVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALE
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| KAA0045922.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] | 3.9e-41 | 43.3 | Show/hide |
Query: GLTSMMKIAQLVENRELTRNKACLR--ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQYSG-HKCTARDQK-----EL
GL MMK+AQ ++NRE+ R+++ + +++ + T+P+RTITLR V+ N REGPSR+LSDVEFQVR +KGLCF C+E++ H+C +DQK EL
Subjt: GLTSMMKIAQLVENRELTRNKACLR--ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQYSG-HKCTARDQK-----EL
Query: RVLLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMW
RVL++ N EE E WL+TLGVTEV WR L++ Q KK++++GDPSLTK +VSLK ++K W
Subjt: RVLLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMW
Query: ETEDQGYLIKCRALEGGVSMTEWF
DQG+LI+CR LEGG++ E +
Subjt: ETEDQGYLIKCRALEGGVSMTEWF
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| KAA0052896.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.5e-35 | 35.77 | Show/hide |
Query: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
R GL MM +AQL ENRE RN+A L+ ++ N T PMRTITL+ ++EG S+RLS+ EFQ R++KGLCF C+E
Subjt: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
Query: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
+YS HKC ++Q+ELR+ ++ DE++E
Subjt: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
Query: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
WLY+LG TEVDWRNL+M+ +GKKI++KGDPSLTKARVSLK M+K WE DQG+LI+ R++EG
Subjt: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
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| TYK13668.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] | 2.4e-38 | 43.24 | Show/hide |
Query: GLTSMMKIAQLVENRELTRNKACLRENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQ-YSGHKCTARDQK-----ELRV
GL MMK+AQ ++NRE + T+P+RTITLR V+ N REGPSR+LSDVEFQVR +KGLCF C+E+ Y+ H+C +DQK ELRV
Subjt: GLTSMMKIAQLVENRELTRNKACLRENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQ-YSGHKCTARDQK-----ELRV
Query: LLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWET
L++ N EE E WL+TLGVTEV W L++ Q KK++++GDPSLTK +VSLK ++K W
Subjt: LLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWET
Query: EDQGYLIKCRALEGGVSMTEWF
DQG+LI+CR LEGG++ E +
Subjt: EDQGYLIKCRALEGGVSMTEWF
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| TYK14463.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.5e-35 | 35.77 | Show/hide |
Query: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
R GL MM +AQL ENRE RN+A L+ ++ N T PMRTITL+ ++EG S+RLS+ EFQ R++KGLCF C+E
Subjt: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
Query: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
+YS HKC ++Q+ELR+ ++ DE++E
Subjt: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
Query: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
WLY+LG TEVDWRNL+M+ +GKKI++KGDPSLTKARVSLK M+K WE DQG+LI+ R++EG
Subjt: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TCK3 Ty3/gypsy retrotransposon protein | 9.1e-36 | 38.06 | Show/hide |
Query: RTYGLTSMMKIAQLVENRELTRNKACLR-----------------------ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFH
R GL MM AQLVENRE+ RN+A L+ + + N T P+RTITL+ + R+EG SRRL D EFQ+RR+KGLCF
Subjt: RTYGLTSMMKIAQLVENRELTRNKACLR-----------------------ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFH
Query: CDEQYSG-HKCTARDQKELRVLLIMENDEEWE----------------------------------------------------WLYTLGVTEVDWRNLS
C+E+YS HKC ++Q+ELR+ ++ N+EE E WLY+LGVT DW+NL+
Subjt: CDEQYSG-HKCTARDQKELRVLLIMENDEEWE----------------------------------------------------WLYTLGVTEVDWRNLS
Query: MVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALE
+ K+I +KGDPSLTKARVSLK ++K WE +D YLI+CR+++
Subjt: MVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALE
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| A0A5A7TRA1 Transposon Tf2-1 polyprotein isoform X1 | 1.9e-41 | 43.3 | Show/hide |
Query: GLTSMMKIAQLVENRELTRNKACLR--ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQYSG-HKCTARDQK-----EL
GL MMK+AQ ++NRE+ R+++ + +++ + T+P+RTITLR V+ N REGPSR+LSDVEFQVR +KGLCF C+E++ H+C +DQK EL
Subjt: GLTSMMKIAQLVENRELTRNKACLR--ENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQYSG-HKCTARDQK-----EL
Query: RVLLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMW
RVL++ N EE E WL+TLGVTEV WR L++ Q KK++++GDPSLTK +VSLK ++K W
Subjt: RVLLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMW
Query: ETEDQGYLIKCRALEGGVSMTEWF
DQG+LI+CR LEGG++ E +
Subjt: ETEDQGYLIKCRALEGGVSMTEWF
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| A0A5A7UFA3 Ty3/gypsy retrotransposon protein | 2.6e-35 | 35.77 | Show/hide |
Query: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
R GL MM +AQL ENRE RN+A L+ ++ N T PMRTITL+ ++EG S+RLS+ EFQ R++KGLCF C+E
Subjt: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
Query: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
+YS HKC ++Q+ELR+ ++ DE++E
Subjt: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
Query: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
WLY+LG TEVDWRNL+M+ +GKKI++KGDPSLTKARVSLK M+K WE DQG+LI+ R++EG
Subjt: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
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| A0A5D3CR50 Transposon Tf2-1 polyprotein isoform X1 | 1.1e-38 | 43.24 | Show/hide |
Query: GLTSMMKIAQLVENRELTRNKACLRENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQ-YSGHKCTARDQK-----ELRV
GL MMK+AQ ++NRE + T+P+RTITLR V+ N REGPSR+LSDVEFQVR +KGLCF C+E+ Y+ H+C +DQK ELRV
Subjt: GLTSMMKIAQLVENRELTRNKACLRENSNANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDEQ-YSGHKCTARDQK-----ELRV
Query: LLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWET
L++ N EE E WL+TLGVTEV W L++ Q KK++++GDPSLTK +VSLK ++K W
Subjt: LLIMENDEEWE---------------------------------------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWET
Query: EDQGYLIKCRALEGGVSMTEWF
DQG+LI+CR LEGG++ E +
Subjt: EDQGYLIKCRALEGGVSMTEWF
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| A0A5D3CRH2 Ty3/gypsy retrotransposon protein | 2.6e-35 | 35.77 | Show/hide |
Query: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
R GL MM +AQL ENRE RN+A L+ ++ N T PMRTITL+ ++EG S+RLS+ EFQ R++KGLCF C+E
Subjt: RTYGLTSMMKIAQLVENRELTRNKACLRENS--------------------NANETLPMRTITLRGVSTMANRREGPSRRLSDVEFQVRRDKGLCFHCDE
Query: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
+YS HKC ++Q+ELR+ ++ DE++E
Subjt: QYS-GHKCTARDQKELRVLLIMENDEEWE-----------------------------------------------------------------------
Query: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
WLY+LG TEVDWRNL+M+ +GKKI++KGDPSLTKARVSLK M+K WE DQG+LI+ R++EG
Subjt: ----------WLYTLGVTEVDWRNLSMVINQKGKKIMLKGDPSLTKARVSLKRMVKMWETEDQGYLIKCRALEG
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