; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G003860 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G003860
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPectin lyase-like superfamily protein
Genome locationCG_Chr08:11301839..11303026
RNA-Seq ExpressionClCG08G003860
SyntenyClCG08G003860
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927702.1 polygalacturonase-like [Cucurbita moschata]1.2e-6347.28Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M+ILR  L+L+F  +FL S  AI+ S N+VS GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGGI DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+TVK ALFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

XP_022927888.1 polygalacturonase-like [Cucurbita moschata]2.6e-6346.94Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M+ILR  L+L+F  +FL S  AIA S N+VS GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGG+ DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+TVK  LFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

XP_022927889.1 polygalacturonase-like [Cucurbita moschata]6.1e-6547.96Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M ILR  L+++F  +FLNS  AIA S N+VS GAK DGKSDST AF+ AWANACGSI+P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DY+
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGGI DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D QE GVQN+TVK ALFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

XP_022989659.1 polygalacturonase-like [Cucurbita maxima]2.0e-6346.94Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M ILR  L+L+F  VFL S  AIA S N+V  GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGG+ DG+G+ LWACKN+ +TCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+T+K ALFSRTQNGVRIKAW+RPSNGFV+S+LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

XP_023531792.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]3.0e-6446.94Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M ILR+ L+L+F  +FLNS  AIA S N++S GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DY+
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGG+ DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+TVK ALFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

TrEMBL top hitse value%identityAlignment
A0A6J1EHY1 polygalacturonase-like5.6e-6447.28Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M+ILR  L+L+F  +FL S  AI+ S N+VS GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGGI DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+TVK ALFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

A0A6J1EJA0 polygalacturonase-like3.0e-6547.96Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M ILR  L+++F  +FLNS  AIA S N+VS GAK DGKSDST AF+ AWANACGSI+P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DY+
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGGI DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D QE GVQN+TVK ALFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

A0A6J1EMB1 polygalacturonase-like1.2e-6346.94Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M+ILR  L+L+F  +FL S  AIA S N+VS GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGG+ DG+G+ LWACKN+ KTCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+TVK  LFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

A0A6J1JGG6 polygalacturonase-like2.8e-6346.6Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M ILR  L+L+F  VFL S  AIA S N+V  GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGG+ DG+G+ LWACKN+ +TCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+T+K ALFSRTQNGVRIKAW RPSNGFV+++LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

A0A6J1JPZ1 polygalacturonase-like9.5e-6446.94Show/hide
Query:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR
        M ILR  L+L+F  VFL S  AIA S N+V  GAK DGKSDST AF+ AWANACGS +P SIYVP GR+YL+S TFNGPCKNNAIFIR+DGTLVAP DYR
Subjt:  MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYR

Query:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------
        VIG+S AWI+F+ VDGVTISGG+ DG+G+ LWACKN+ +TCP+GA+                                                      
Subjt:  VIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS------------------------------------------------------

Query:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                         D +E GVQN+T+K ALFSRTQNGVRIKAW+RPSNGFV+S+LFQ+I
Subjt:  -------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438606.0e-3131.31Show/hide
Query:  SLLVLYFSCVFLNSKCAIALSY------NIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNG-PCKNNAIFIRVDGTLVAPFD
        S L+L  + + L+     +L++      N++S+GAK DG  DST AF  AW  AC S  P +I VP+GRF + +  F+G  CK   I IR+ G++VAP D
Subjt:  SLLVLYFSCVFLNSKCAIALSY------NIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNG-PCKNNAIFIRVDGTLVAPFD

Query:  YRVIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACK-NAAKTCPTGASD--------------------------------------------------
        +R+I SS  WI F++V  V+I GGILD QGTSLW CK N    CPTGA                                                    
Subjt:  YRVIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACK-NAAKTCPTGASD--------------------------------------------------

Query:  -----------------------------------------------------AQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                              +E GV N+TV N  F  T NGVRIK W + SN F R+++FQ+I
Subjt:  -----------------------------------------------------AQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

P26216 Exopolygalacturonase5.8e-1840.87Show/hide
Query:  SYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIMFKNVDGVTISG-GIL
        S++I   GA  +GK+DST A Q+AWA+ACG     +I +P+G F +    F GPCK + + I+VDG L+A  D         WI    VD + I+G G L
Subjt:  SYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIMFKNVDGVTISG-GIL

Query:  DGQGTSLWACKNAAK
        DGQG ++W+  +  K
Subjt:  DGQGTSLWACKNAAK

P35338 Exopolygalacturonase5.8e-1840.87Show/hide
Query:  SYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIMFKNVDGVTISG-GIL
        S++I   GA  +GK+DST A Q+AWA+ACG     +I +P+G F +    F GPCK + + I+VDG L+A  D         WI    VD + I+G G L
Subjt:  SYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIMFKNVDGVTISG-GIL

Query:  DGQGTSLWACKNAAK
        DGQG ++W+  +  K
Subjt:  DGQGTSLWACKNAAK

P48979 Polygalacturonase5.4e-4839.66Show/hide
Query:  MAILRSLLVLYFSCVF-LNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDY
        MA  RSL  L    VF +NS  A  L+YN+ S GAKADGK+DST AF  AWA AC S+ P  IYVP G F+L+   F+GPCKNNAI  R+ GTLVAP DY
Subjt:  MAILRSLLVLYFSCVF-LNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDY

Query:  RVIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNA-AKTCPTGAS----------------------------------------------------
        RVIG++  WI F +V+GVTISGGILDGQGT+LWACK    ++CP+GA+                                                    
Subjt:  RVIGSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNA-AKTCPTGAS----------------------------------------------------

Query:  ---------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQN
                                                           + +E GVQN+TVK   FS TQNG+RIK+W RPS GF R++LFQ+
Subjt:  ---------------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQN

Q6H9K0 Exopolygalacturonase (Fragment)2.2e-1738.6Show/hide
Query:  YNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIMFKNVDGVTISG-GILD
        +N+  +GAK  G  D + A  KAW  AC S  P+++ +P+G + +      GPCK + I  ++DG + AP D      S  W+ F  +DG+T+SG G LD
Subjt:  YNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIMFKNVDGVTISG-GILD

Query:  GQGTSLWACKNAAK
        GQG + WA  N  K
Subjt:  GQGTSLWACKNAAK

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein3.7e-3630.42Show/hide
Query:  VLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAW
        +++    F++   + ++ +N+VSFGAK DG +DST AF KAW  ACGS   A++ VP G F L+  TF GPCK+   F +V GT+VAP DYR  G+S +W
Subjt:  VLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAW

Query:  IMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTG----------------------------------------------------------------
        I+F  V+  ++ GG  D +G+  W+C+ + + CP G                                                                
Subjt:  IMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTG----------------------------------------------------------------

Query:  ---------------------------------------ASDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                               A    E GV+N+TV +++F+ +QNGVRIK+WARPS GFVR+V FQN+
Subjt:  ---------------------------------------ASDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

AT1G05660.1 Pectin lyase-like superfamily protein3.5e-3429.72Show/hide
Query:  VLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAW
        +L+    F++   + +  +N+VSFGAK DG +DST AF KAW  AC S   A++ VP+G F L+  TF GPCK+   F +V GT++AP DYR  G+S  W
Subjt:  VLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAW

Query:  IMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTG----------------------------------------------------------------
        I+F  V+  ++ GG  D +    W+C+ + + CP G                                                                
Subjt:  IMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTG----------------------------------------------------------------

Query:  ---------------------------------------ASDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                               A + +E GV+N+TV +++F+ +QNGVRIK+WARPSNGFVR+V FQ++
Subjt:  ---------------------------------------ASDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

AT2G43870.1 Pectin lyase-like superfamily protein3.1e-4335.4Show/hide
Query:  LRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNG-PCKNNAIFIRVDGTLVAPFDYRVI
        + SLLVL+    F  S C+ A SYN++SFGAK DGK+D+T AF   W  AC S +P +I VP+GRF L+S TF+G  CK   +  R+DGTLVAP DYRVI
Subjt:  LRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNG-PCKNNAIFIRVDGTLVAPFDYRVI

Query:  GSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS--------------------------------------------------------
        G+   WI F+++DG+T+ GG+LD +G SLW CK + K CP+GA+                                                        
Subjt:  GSSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS--------------------------------------------------------

Query:  -----------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQN
                                                       D+ E GVQN+TVK   F+ T NGVRIK+WARPS+GF +++ FQ+
Subjt:  -----------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQN

AT2G43890.1 Pectin lyase-like superfamily protein8.9e-3832.65Show/hide
Query:  LRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIG
        L ++L+++FS   L      A +YN+VSFGAK DG++DST AF  AW  AC S    ++ VP+G F L+   F GPC++   F ++ GT+VAP DYR +G
Subjt:  LRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIG

Query:  SSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGA----------------------------------------------------------
        +S  WI+F  V+ ++I GG LD +G S WAC+ + K+CP GA                                                          
Subjt:  SSPAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGA----------------------------------------------------------

Query:  ---------------------------------------------SDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI
                                                      DA E GV+NIT+ N++FS + NGVRIK WAR S GFVR+VLFQN+
Subjt:  ---------------------------------------------SDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI

AT3G59850.1 Pectin lyase-like superfamily protein2.4e-4335.42Show/hide
Query:  LLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNG-PCKNNAIFIRVDGTLVAPFDYRVIGSS
        L+VL F    L+   + A +YNI+S+GAK DGK+DST AF   WA AC S+KP +I VP+GRF L+S  F+G  CK  ++  R+ GTLVAP DYRVIG  
Subjt:  LLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNG-PCKNNAIFIRVDGTLVAPFDYRVIGSS

Query:  PAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS-----------------------------------------------------------
          WI+F+++DG+++ GG+LD QG SLW+CK + K CP+GA+                                                           
Subjt:  PAWIMFKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGAS-----------------------------------------------------------

Query:  --------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQN
                                                    ++ E GVQNITVK A F+ T+NGVRIK+WARPSNGF +++ FQ+
Subjt:  --------------------------------------------DAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCTTAGAAGCCTTTTAGTGCTTTACTTTTCCTGTGTGTTTCTCAACTCAAAATGTGCCATTGCATTGTCATATAATATTGTTAGTTTTGGAGCTAAAGCTGA
TGGCAAATCTGATTCAACACACGCATTTCAAAAGGCATGGGCCAATGCATGTGGGTCCATTAAACCTGCCTCCATTTATGTGCCCCAAGGAAGATTTTACCTCCAAAGTG
GAACATTCAACGGACCTTGCAAGAATAATGCCATTTTCATACGCGTTGATGGCACTCTAGTGGCTCCCTTTGATTATCGAGTTATTGGCAGCTCTCCAGCTTGGATCATG
TTTAAGAATGTTGATGGAGTAACTATCTCAGGTGGCATTCTTGATGGTCAAGGAACTAGCTTATGGGCTTGTAAAAATGCTGCCAAGACTTGCCCAACAGGTGCCTCGGA
TGCACAAGAGCCTGGGGTGCAAAATATTACTGTGAAAAATGCTTTATTTTCACGCACTCAGAACGGAGTGAGAATCAAAGCATGGGCTAGGCCAAGCAATGGATTTGTCA
GGAGCGTTCTCTTCCAAAACATT
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCTTAGAAGCCTTTTAGTGCTTTACTTTTCCTGTGTGTTTCTCAACTCAAAATGTGCCATTGCATTGTCATATAATATTGTTAGTTTTGGAGCTAAAGCTGA
TGGCAAATCTGATTCAACACACGCATTTCAAAAGGCATGGGCCAATGCATGTGGGTCCATTAAACCTGCCTCCATTTATGTGCCCCAAGGAAGATTTTACCTCCAAAGTG
GAACATTCAACGGACCTTGCAAGAATAATGCCATTTTCATACGCGTTGATGGCACTCTAGTGGCTCCCTTTGATTATCGAGTTATTGGCAGCTCTCCAGCTTGGATCATG
TTTAAGAATGTTGATGGAGTAACTATCTCAGGTGGCATTCTTGATGGTCAAGGAACTAGCTTATGGGCTTGTAAAAATGCTGCCAAGACTTGCCCAACAGGTGCCTCGGA
TGCACAAGAGCCTGGGGTGCAAAATATTACTGTGAAAAATGCTTTATTTTCACGCACTCAGAACGGAGTGAGAATCAAAGCATGGGCTAGGCCAAGCAATGGATTTGTCA
GGAGCGTTCTCTTCCAAAACATT
Protein sequenceShow/hide protein sequence
MAILRSLLVLYFSCVFLNSKCAIALSYNIVSFGAKADGKSDSTHAFQKAWANACGSIKPASIYVPQGRFYLQSGTFNGPCKNNAIFIRVDGTLVAPFDYRVIGSSPAWIM
FKNVDGVTISGGILDGQGTSLWACKNAAKTCPTGASDAQEPGVQNITVKNALFSRTQNGVRIKAWARPSNGFVRSVLFQNI