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ClCG08G004060 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G004060
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:12805665..12807547
RNA-Seq ExpressionClCG08G004060
SyntenyClCG08G004060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592883.1 hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sororia]3.0e-5956.98Show/hide
Query:  LQKKNPKFFEEENQGKSMVITTN-RGSNPAESTIPSVSTFKIPSFFLKTFQKRFDYCNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFSACRFGS
        L K  PK F+EE Q  S+VI TN  GS+PAEST PSVS  K+P+FFLK F+KRFDYC  N  EKE S +IE KKK L E AS+F K FGG K SAC  G 
Subjt:  LQKKNPKFFEEENQGKSMVITTN-RGSNPAESTIPSVSTFKIPSFFLKTFQKRFDYCNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFSACRFGS

Query:  KIDGEHQDSSSESEAEEEEYRDERDEIFYG-----SETKKKLLKNEKISSQLKLPVSILDVFSKKNAMDFNFSFVKSRICKGKNGNRNRNLDYNQNLREN
        KIDG+  D  SESEA  ++YR++R+EIF       SET+  +  +EK SSQ +LP SILD+F K+N   FNF+F+KSRICK K+G RNRNL+Y +NLR N
Subjt:  KIDGEHQDSSSESEAEEEEYRDERDEIFYG-----SETKKKLLKNEKISSQLKLPVSILDVFSKKNAMDFNFSFVKSRICKGKNGNRNRNLDYNQNLREN

Query:  ESVTRL-SRENLK------------GERKNSTAISYHEDDEKGERLWQKRILMGERCKPVMHTSI
        ES     +REN K             + K STAISYHE DE G+RLWQKRILMG RCKP+ +TSI
Subjt:  ESVTRL-SRENLK------------GERKNSTAISYHEDDEKGERLWQKRILMGERCKPVMHTSI

KAG6607704.1 hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0850Show/hide
Query:  LQKKNPKFFEEENQGKSMVITTN-RGSNPAESTIPSVSTFKIPSFFL----KTFQKRFDYCNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFS
        L K  PK F+EE Q  S+VI TN  GS+PAEST PSVS  K+P+FFL    KTF+K+          K+ +S   +KKK L E AS+F K FGG K S
Subjt:  LQKKNPKFFEEENQGKSMVITTN-RGSNPAESTIPSVSTFKIPSFFL----KTFQKRFDYCNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACGGTAGACCAGCAGCGACGCACAACGAATGGGAACGAAATTCAACTGGCGAACGCGCGAACCGGATTACCGAGCACCCACAACTGGCCGGACGAAGACCACA
AACGGCAAAGGTGGAGACCACGAACGACGCTGATGTCGCCTGGCTTTGGCAACGAGAAATGAAAGAACGAAGGGCAGAGGGAGTGACAAAGAAGGAAGAACTGATAATGC
AATGGAGATCGGATTCCTTGCAAAAGAAGAACCCAAAATTTTTTGAAGAAGAAAATCAAGGTAAATCCATGGTTATCACCACAAACAGAGGATCCAACCCCGCAGAATCC
ACCATTCCTTCTGTTTCTACCTTCAAGATTCCATCCTTCTTTCTCAAAACCTTCCAAAAAAGATTCGATTACTGCAACACTAACAACGACGAAAAAGAAATTTCCAGCGA
CATCGAGAAGAAGAAGAAGTGCCTCATCGAATTTGCCTCTCTGTTCTACAAATTCTTCGGCGGATTCAAATTCTCGGCTTGCAGATTCGGAAGCAAGATCGATGGAGAAC
ACCAAGATTCTTCAAGCGAATCGGAAGCCGAAGAAGAAGAATATCGCGACGAACGGGATGAAATTTTTTACGGATCGGAAACAAAGAAGAAACTTCTTAAAAACGAGAAG
ATCTCAAGCCAATTGAAACTTCCTGTATCAATCTTAGATGTATTTAGCAAGAAGAATGCGATGGATTTCAATTTCAGTTTCGTCAAGAGCAGAATCTGCAAGGGGAAAAA
TGGGAACAGAAACAGAAATCTCGATTACAACCAAAATCTCAGAGAAAATGAATCGGTTACTCGATTGAGCCGAGAAAATCTTAAGGGAGAACGGAAAAATTCAACGGCAA
TTTCATACCATGAAGATGATGAAAAGGGAGAACGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGTAAACCTGTAATGCATACCTCTATAAGTCTTCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACGGTAGACCAGCAGCGACGCACAACGAATGGGAACGAAATTCAACTGGCGAACGCGCGAACCGGATTACCGAGCACCCACAACTGGCCGGACGAAGACCACA
AACGGCAAAGGTGGAGACCACGAACGACGCTGATGTCGCCTGGCTTTGGCAACGAGAAATGAAAGAACGAAGGGCAGAGGGAGTGACAAAGAAGGAAGAACTGATAATGC
AATGGAGATCGGATTCCTTGCAAAAGAAGAACCCAAAATTTTTTGAAGAAGAAAATCAAGGTAAATCCATGGTTATCACCACAAACAGAGGATCCAACCCCGCAGAATCC
ACCATTCCTTCTGTTTCTACCTTCAAGATTCCATCCTTCTTTCTCAAAACCTTCCAAAAAAGATTCGATTACTGCAACACTAACAACGACGAAAAAGAAATTTCCAGCGA
CATCGAGAAGAAGAAGAAGTGCCTCATCGAATTTGCCTCTCTGTTCTACAAATTCTTCGGCGGATTCAAATTCTCGGCTTGCAGATTCGGAAGCAAGATCGATGGAGAAC
ACCAAGATTCTTCAAGCGAATCGGAAGCCGAAGAAGAAGAATATCGCGACGAACGGGATGAAATTTTTTACGGATCGGAAACAAAGAAGAAACTTCTTAAAAACGAGAAG
ATCTCAAGCCAATTGAAACTTCCTGTATCAATCTTAGATGTATTTAGCAAGAAGAATGCGATGGATTTCAATTTCAGTTTCGTCAAGAGCAGAATCTGCAAGGGGAAAAA
TGGGAACAGAAACAGAAATCTCGATTACAACCAAAATCTCAGAGAAAATGAATCGGTTACTCGATTGAGCCGAGAAAATCTTAAGGGAGAACGGAAAAATTCAACGGCAA
TTTCATACCATGAAGATGATGAAAAGGGAGAACGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGTAAACCTGTAATGCATACCTCTATAAGTCTTCGATAG
Protein sequenceShow/hide protein sequence
MANGRPAATHNEWERNSTGERANRITEHPQLAGRRPQTAKVETTNDADVAWLWQREMKERRAEGVTKKEELIMQWRSDSLQKKNPKFFEEENQGKSMVITTNRGSNPAES
TIPSVSTFKIPSFFLKTFQKRFDYCNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFSACRFGSKIDGEHQDSSSESEAEEEEYRDERDEIFYGSETKKKLLKNEK
ISSQLKLPVSILDVFSKKNAMDFNFSFVKSRICKGKNGNRNRNLDYNQNLRENESVTRLSRENLKGERKNSTAISYHEDDEKGERLWQKRILMGERCKPVMHTSISLR