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ClCG08G004300 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G004300
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:13604578..13604898
RNA-Seq ExpressionClCG08G004300
SyntenyClCG08G004300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]8.1e-1041.12Show/hide
Query:  MDAAWNSSSNS-----------GQVRLAGLKYMSTLSRVKLIEGMTICYGLENLYSLSISNILVESDCLEAI--NLHEITVDISNVSLFIGEVTGCGKAL
        MDA+WNS  ++            +V +AGLK++    +V ++E + IC+GLE L S+ ISNI+VESDCLE +   L++  VD+S VS    E    G  L
Subjt:  MDAAWNSSSNS-----------GQVRLAGLKYMSTLSRVKLIEGMTICYGLENLYSLSISNILVESDCLEAI--NLHEITVDISNVSLFIGEVTGCGKAL

Query:  GVVAYSH
        GV+++SH
Subjt:  GVVAYSH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTGCTTGGAACTCAAGTTCCAATTCAGGACAAGTTCGATTGGCTGGCCTCAAGTATATGTCCACCTTGTCAAGGGTGAAGCTCATTGAAGGGATGACA
ATATGCTATGGGCTTGAGAATCTTTATTCATTAAGCATCTCAAATATTCTAGTTGAGTCTGATTGTTTGGAGGCAATCAATCTACATGAGATTACTGTCGATATT
TCTAATGTTTCTCTCTTCATCGGGGAGGTTACGGGATGTGGCAAAGCATTGGGAGTTGTCGCTTATTCTCATAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTGCTTGGAACTCAAGTTCCAATTCAGGACAAGTTCGATTGGCTGGCCTCAAGTATATGTCCACCTTGTCAAGGGTGAAGCTCATTGAAGGGATGACA
ATATGCTATGGGCTTGAGAATCTTTATTCATTAAGCATCTCAAATATTCTAGTTGAGTCTGATTGTTTGGAGGCAATCAATCTACATGAGATTACTGTCGATATT
TCTAATGTTTCTCTCTTCATCGGGGAGGTTACGGGATGTGGCAAAGCATTGGGAGTTGTCGCTTATTCTCATAGTTAG
Protein sequenceShow/hide protein sequence
MDAAWNSSSNSGQVRLAGLKYMSTLSRVKLIEGMTICYGLENLYSLSISNILVESDCLEAINLHEITVDISNVSLFIGEVTGCGKALGVVAYSHS