; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG08G004560 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G004560
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:14474973..14475606
RNA-Seq ExpressionClCG08G004560
SyntenyClCG08G004560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]2.1e-0434.86Show/hide
Query:  WIFNMKKKGHPLPLKQRWKHDQSLE----RKETWKTVQRGEIQLEHPPMEDVVFK-------KAD---------ENKTPTNKEIKSIQFQNNYSNRLLYS
        W  +M+     +P  + W  +  L+     + +WKT +RGE+  +HPP+E+V F        KA          E   PT K+IK+IQ QNNYSN++L +
Subjt:  WIFNMKKKGHPLPLKQRWKHDQSLE----RKETWKTVQRGEIQLEHPPMEDVVFK-------KAD---------ENKTPTNKEIKSIQFQNNYSNRLLYS

Query:  IAQQVSKFE
        IA Q+   E
Subjt:  IAQQVSKFE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCATGGATCTTCAATATGAAGAAGAAAGGCCATCCTCTCCCACTCAAACAAAGATGGAAACATGATCAGTCTTTAGAAAGAAAAGAAACATGGAAGACCGTCCA
AAGAGGAGAAATTCAATTGGAACATCCTCCAATGGAAGATGTAGTGTTCAAGAAAGCCGATGAAAATAAGACACCAACAAATAAAGAAATTAAAAGCATCCAATTTCAAA
ATAACTATTCAAACAGGCTATTATATTCAATAGCACAACAAGTTTCCAAGTTCGAAGAACTCCTCAATCCACCAATAGAAACGTTTGAAACACCCCTTTTCAGACCGCCT
GAAAAAATTAAATTAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCATGGATCTTCAATATGAAGAAGAAAGGCCATCCTCTCCCACTCAAACAAAGATGGAAACATGATCAGTCTTTAGAAAGAAAAGAAACATGGAAGACCGTCCA
AAGAGGAGAAATTCAATTGGAACATCCTCCAATGGAAGATGTAGTGTTCAAGAAAGCCGATGAAAATAAGACACCAACAAATAAAGAAATTAAAAGCATCCAATTTCAAA
ATAACTATTCAAACAGGCTATTATATTCAATAGCACAACAAGTTTCCAAGTTCGAAGAACTCCTCAATCCACCAATAGAAACGTTTGAAACACCCCTTTTCAGACCGCCT
GAAAAAATTAAATTAAACTAA
Protein sequenceShow/hide protein sequence
MESWIFNMKKKGHPLPLKQRWKHDQSLERKETWKTVQRGEIQLEHPPMEDVVFKKADENKTPTNKEIKSIQFQNNYSNRLLYSIAQQVSKFEELLNPPIETFETPLFRPP
EKIKLN