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ClCG08G004810 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G004810
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCell wall protein RBR3-like
Genome locationCG_Chr08:15114185..15114781
RNA-Seq ExpressionClCG08G004810
SyntenyClCG08G004810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039040.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]1.6e-2047.06Show/hide
Query:  GKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHI
        G+K    N+S + +DG+SFH ++    WKY V+R IVD+  + +     L  MDLI++ GL + + N+GPFYPQLI EFIVNL ++F++P+SP++Q VHI
Subjt:  GKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHI

Query:  HR
         R
Subjt:  HR

KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]9.6e-2147.75Show/hide
Query:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF
        + K   KK+ + NV S+P+DG+SFH E+    WK+ ++R IVD   I +  Q  + +MDLI + GLE+ + N+GPFYPQLI EFIVNL  +F+DP+S ++
Subjt:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF

Query:  QRVHIHRHTFV
        Q VHI    FV
Subjt:  QRVHIHRHTFV

KAA0056211.1 uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa]1.1e-1945.71Show/hide
Query:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH
        +K    NV S+P+DG+SFH E+    WK+ +++ IVD+  I +  Q  + +MDLI + GLE+ + ++GPFYPQLI EFIVNL  +F++P+S ++Q VHI 
Subjt:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH

Query:  RHTFV
           FV
Subjt:  RHTFV

TYK27067.1 uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa]9.6e-2147.75Show/hide
Query:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF
        + K   KK+ + NV S+P+DG+SFH E+    WK+ ++R IVD   I +  Q  + +MDLI + GLE+ + N+GPFYPQLI EFIVNL  +F+DP+S ++
Subjt:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF

Query:  QRVHIHRHTFV
        Q VHI    FV
Subjt:  QRVHIHRHTFV

XP_008457264.1 PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo]1.3e-2049.52Show/hide
Query:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH
        +K  S NV S+P+DG+SFH E+    WK+ ++R IVD+  I +  Q  + +MDLI + GLE+ + N+GPFYPQLI EFIVNL  +F DP+S  +Q VHI 
Subjt:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH

Query:  RHTFV
           FV
Subjt:  RHTFV

TrEMBL top hitse value%identityAlignment
A0A1S3C6D9 uncharacterized protein LOC1034969906.1e-2149.52Show/hide
Query:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH
        +K  S NV S+P+DG+SFH E+    WK+ ++R IVD+  I +  Q  + +MDLI + GLE+ + N+GPFYPQLI EFIVNL  +F DP+S  +Q VHI 
Subjt:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH

Query:  RHTFV
           FV
Subjt:  RHTFV

A0A5A7T712 Cell wall protein RBR3-like7.9e-2147.06Show/hide
Query:  GKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHI
        G+K    N+S + +DG+SFH ++    WKY V+R IVD+  + +     L  MDLI++ GL + + N+GPFYPQLI EFIVNL ++F++P+SP++Q VHI
Subjt:  GKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHI

Query:  HR
         R
Subjt:  HR

A0A5A7TK74 Uncharacterized protein4.6e-2147.75Show/hide
Query:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF
        + K   KK+ + NV S+P+DG+SFH E+    WK+ ++R IVD   I +  Q  + +MDLI + GLE+ + N+GPFYPQLI EFIVNL  +F+DP+S ++
Subjt:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF

Query:  QRVHIHRHTFV
        Q VHI    FV
Subjt:  QRVHIHRHTFV

A0A5A7URQ6 Uncharacterized protein5.1e-2045.71Show/hide
Query:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH
        +K    NV S+P+DG+SFH E+    WK+ +++ IVD+  I +  Q  + +MDLI + GLE+ + ++GPFYPQLI EFIVNL  +F++P+S ++Q VHI 
Subjt:  KKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIH

Query:  RHTFV
           FV
Subjt:  RHTFV

A0A5D3DTI5 Uncharacterized protein4.6e-2147.75Show/hide
Query:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF
        + K   KK+ + NV S+P+DG+SFH E+    WK+ ++R IVD   I +  Q  + +MDLI + GLE+ + N+GPFYPQLI EFIVNL  +F+DP+S ++
Subjt:  SVKAKGKKMTSGNVSSIPLDGVSFHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEF

Query:  QRVHIHRHTFV
        Q VHI    FV
Subjt:  QRVHIHRHTFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCGAAAACTAATGAAGAAATCCCTAAGAAAATCCCTCCCCCTGTTAATATTGTTGAACAAGAGATTGGGCCTCGTGCTGAGTCTCCATCTAAGAGAAATGAGGA
AACTGAAGTAGATGTAGAAGGTGATGTTCATACTTCCCCTGTGACATCTGAAAATGCATCTGAACAGTCTCCATCTAAGGAAGACTCCAACTGGGGTTTTCAAAGCAACT
CAGACAACGAAGACACTGGAAAGGTGCGTGTCACTTGTGCTTCAGTCAAAGCAAAAGGAAAGAAAATGACTAGTGGGAATGTTTCCTCCATACCATTGGATGGGGTATCT
TTTCATACAGAAGATGGTGCATGTTTATGGAAGTATGGTGTAAAGAGAAATATCGTTGATAAAAATAAGATATGTGAAAGTGCACAAGAATATCTTGATCTCATGGATTT
AATACTTGAAGTCGGTTTAGAAAGGATTGTATTGAATTTGGGACCCTTTTATCCCCAACTTATTCATGAGTTCATAGTGAATTTGACTACAGATTTTGATGATCCCACAA
GTCCTGAGTTTCAGAGAGTTCATATCCATCGTCATACATTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCGAAAACTAATGAAGAAATCCCTAAGAAAATCCCTCCCCCTGTTAATATTGTTGAACAAGAGATTGGGCCTCGTGCTGAGTCTCCATCTAAGAGAAATGAGGA
AACTGAAGTAGATGTAGAAGGTGATGTTCATACTTCCCCTGTGACATCTGAAAATGCATCTGAACAGTCTCCATCTAAGGAAGACTCCAACTGGGGTTTTCAAAGCAACT
CAGACAACGAAGACACTGGAAAGGTGCGTGTCACTTGTGCTTCAGTCAAAGCAAAAGGAAAGAAAATGACTAGTGGGAATGTTTCCTCCATACCATTGGATGGGGTATCT
TTTCATACAGAAGATGGTGCATGTTTATGGAAGTATGGTGTAAAGAGAAATATCGTTGATAAAAATAAGATATGTGAAAGTGCACAAGAATATCTTGATCTCATGGATTT
AATACTTGAAGTCGGTTTAGAAAGGATTGTATTGAATTTGGGACCCTTTTATCCCCAACTTATTCATGAGTTCATAGTGAATTTGACTACAGATTTTGATGATCCCACAA
GTCCTGAGTTTCAGAGAGTTCATATCCATCGTCATACATTTGTTTAA
Protein sequenceShow/hide protein sequence
MNPKTNEEIPKKIPPPVNIVEQEIGPRAESPSKRNEETEVDVEGDVHTSPVTSENASEQSPSKEDSNWGFQSNSDNEDTGKVRVTCASVKAKGKKMTSGNVSSIPLDGVS
FHTEDGACLWKYGVKRNIVDKNKICESAQEYLDLMDLILEVGLERIVLNLGPFYPQLIHEFIVNLTTDFDDPTSPEFQRVHIHRHTFV