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ClCG08G005208 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G005208
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationCG_Chr08:16448628..16450587
RNA-Seq ExpressionClCG08G005208
SyntenyClCG08G005208
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7826472.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Senna tora]8.1e-2649.6Show/hide
Query:  VFRLDF-EDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQ
        +F ++F  DM +ED     +K+D YLLEPR K    FD L+ WK NS+++ +L+ +ARD+LA+P+ST+ASE  FST GRVID ++S LAP  +EAL+CAQ
Subjt:  VFRLDF-EDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQ

Query:  NWLRSKAISVDLQSYLEDIVNVEEG
        NW RSK +S++++   +DI  +E G
Subjt:  NWLRSKAISVDLQSYLEDIVNVEEG

PNX73995.1 HAT family dimerization domain-containing protein, partial [Trifolium pratense]1.2e-2651.08Show/hide
Query:  SISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFR
        S++     S   T+SEV+   FE   D+D NS   +VD+YL EPR K   +FD L+ WK NS++Y  L  +ARD+LA+P+STVASE  FST GRV+  +R
Subjt:  SISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFR

Query:  SMLAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEE
        S L P  VEAL+CAQNWLRS  +SVD++ +LED+  +EE
Subjt:  SMLAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEE

XP_038877573.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]2.9e-3961.81Show/hide
Query:  SSCTTSISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRV
        SSCT  I +S   +T+A+  ++F  DF+D++++D+ SVD++VDIYLLEPR+K E+NFD LD WKGNSSRYK+L K+ARDLLA+P+STVA E  F+T G+V
Subjt:  SSCTTSISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRV

Query:  IDPFRSMLAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEE
        IDPFR+ L+PTIVEALVCAQN LRS+ IS+ L+ YLE+I + EE
Subjt:  IDPFRSMLAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEE

XP_038890289.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]6.0e-3766.1Show/hide
Query:  EDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSKA
        +D++++D+ SVD++VDIYLLEPR+K E+NFD LD WKGNSSRYK+ SK+ARDLLA+PVS VASE +F+T  RVIDPFR+ L+PT +E+LVCAQNWLRS+ 
Subjt:  EDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSKA

Query:  ISVDLQSYLEDIVNVEEG
        IS+ L+ YLE+I + EEG
Subjt:  ISVDLQSYLEDIVNVEEG

XP_038895827.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]1.4e-3066.67Show/hide
Query:  SSCTTSISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRV
        SSCT  I +S   + +A+ASE+FR DFED++++D+ SVD++V IYLLEPR+K E++FD LD WKGNSSRYK+LSK+ARDLLA+PVSTVASE  FSTSG+V
Subjt:  SSCTTSISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRV

Query:  IDPFRSMLAPTIVE
        IDPFR+ L+PT VE
Subjt:  IDPFRSMLAPTIVE

TrEMBL top hitse value%identityAlignment
A0A2K3L630 HAT family dimerization domain-containing protein (Fragment)6.0e-2751.08Show/hide
Query:  SISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFR
        S++     S   T+SEV+   FE   D+D NS   +VD+YL EPR K   +FD L+ WK NS++Y  L  +ARD+LA+P+STVASE  FST GRV+  +R
Subjt:  SISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFR

Query:  SMLAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEE
        S L P  VEAL+CAQNWLRS  +SVD++ +LED+  +EE
Subjt:  SMLAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEE

A0A5A7USD9 Transposase3.1e-2351.24Show/hide
Query:  DFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRS
        +FED          +++DIYLLE  I+ E +FD L  WK NS R++VL ++ARD+LAI VST+ASE  FST GRV+D  R  LAP IVEAL+C QNWL S
Subjt:  DFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRS

Query:  KAISVDLQSYLEDIVNVEEGY
          I   +Q  LE+    EEG+
Subjt:  KAISVDLQSYLEDIVNVEEGY

A0A7N2R2A5 Uncharacterized protein9.6e-2554.62Show/hide
Query:  EDMEDEDANSVDTKVDIYLLEPRIKCE-ENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSK
        + + DED+    +++D YLLE  +  E E FD LD W+ NSSRY++LS+VARD+LAIPVSTVASE  FST GRV+DPFRS L+P  VEAL+C QNWLRSK
Subjt:  EDMEDEDANSVDTKVDIYLLEPRIKCE-ENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSK

Query:  AIS--VDLQSYLEDIVNVE
          +  ++L+  ++++ N E
Subjt:  AIS--VDLQSYLEDIVNVE

A0A803MDM3 Uncharacterized protein1.5e-2553.6Show/hide
Query:  DMEDEDANSVDTKVDIYLLEPRIK-CEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSKA
        D+ED D     +++D+YL  P  K  +E+FD L  W   S  YKVL  +A+D+LAIPVSTV+SE  FSTSGRV+D FRS L P IVE L+CAQ+WLR+  
Subjt:  DMEDEDANSVDTKVDIYLLEPRIK-CEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSKA

Query:  ISVDLQSYLEDIVNVEEGYPYSHVP
        ISVD++  LED+   EEGYP +  P
Subjt:  ISVDLQSYLEDIVNVEEGYPYSHVP

Q2HTZ2 HAT dimerisation1.1e-2350Show/hide
Query:  DEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSKAISVD
        D+D N   T+VDIYL E R K   +FD L+ WK NS++Y     ++RD+LA+P+STVASE  FST GRV+  +RS L    VEAL+CAQNWLRS  +SVD
Subjt:  DEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSMLAPTIVEALVCAQNWLRSKAISVD

Query:  LQSYLEDIVNVEEGYPYSHVPDMN
        ++  LED+  +EE    + +P +N
Subjt:  LQSYLEDIVNVEEGYPYSHVPDMN

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.7e-1343.2Show/hide
Query:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDI--YL---LEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVAS--ELFS--TSGR
        ++  ST   A ++    +DF+    E A S  TK ++  YL   L PRI   + FD L+ WK N+ +Y  LSK+ARD+LAIP+S V+S   +FS  T  R
Subjt:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDI--YL---LEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVAS--ELFS--TSGR

Query:  VIDPFRSMLAPTIVEALVCAQNWLR
        ++D +RS   P IVEALVCA++WL+
Subjt:  VIDPFRSMLAPTIVEALVCAQNWLR

P03010 Putative AC9 transposase3.0e-1541.86Show/hide
Query:  SSCTTS---ISTSTSTSTAATASEVFRLDFEDM--EDEDANSVDT-KVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LF
        SSC+ S     T+T+ S   T  E    +F++   E +D + V++ ++D Y+ EP +K    FD L  W+G  + Y +L+++ARD+LAI VSTVASE  F
Subjt:  SSCTTS---ISTSTSTSTAATASEVFRLDFEDM--EDEDANSVDT-KVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LF

Query:  STSGRVIDPFRSMLAPTIVEALVCAQNWL
        S  GRV+DP+R+ L   IVEAL+C ++W+
Subjt:  STSGRVIDPFRSMLAPTIVEALVCAQNWL

P08770 Putative AC transposase3.0e-1541.86Show/hide
Query:  SSCTTS---ISTSTSTSTAATASEVFRLDFEDM--EDEDANSVDT-KVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LF
        SSC+ S     T+T+ S   T  E    +F++   E +D + V++ ++D Y+ EP +K    FD L  W+G  + Y +L+++ARD+LAI VSTVASE  F
Subjt:  SSCTTS---ISTSTSTSTAATASEVFRLDFEDM--EDEDANSVDT-KVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LF

Query:  STSGRVIDPFRSMLAPTIVEALVCAQNWL
        S  GRV+DP+R+ L   IVEAL+C ++W+
Subjt:  STSGRVIDPFRSMLAPTIVEALVCAQNWL

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.4e-1241.6Show/hide
Query:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDI--YL---LEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVAS--ELFS--TSGR
        ++   T   A ++    +DF+    E A S  TK ++  YL   L PRI   + FD L+ WK N+ ++  LS++ARD+LAIP+S V+S   +FS  T  R
Subjt:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDI--YL---LEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVAS--ELFS--TSGR

Query:  VIDPFRSMLAPTIVEALVCAQNWLR
        ++D +RS L P IVEALVCA++WL+
Subjt:  VIDPFRSMLAPTIVEALVCAQNWLR

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER6.9e-1238.79Show/hide
Query:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSM
        S   +TS    A  +   D   ME    N + +++D YL E  +   + FD LD WK N  +Y  LSK+ARD+L+IPVS  A + +F    R +D +++ 
Subjt:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSM

Query:  LAPTIVEALVCAQNWL
        L P  VEAL+CA+ WL
Subjt:  LAPTIVEALVCAQNWL

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain1.8e-0730.28Show/hide
Query:  ANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVA-SELFSTSGRVIDPFRSMLAPTIVEALVCAQNW------LRSKAI
        +N+V  ++  YL E  +  +   D LD WK NS RY  LS +ARD LA+  ++ A  E+F   G  ID  +  +     ++++C ++W      L+ K  
Subjt:  ANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVA-SELFSTSGRVIDPFRSMLAPTIVEALVCAQNW------LRSKAI

Query:  SVDLQSYLE
         +D +  +E
Subjt:  SVDLQSYLE

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain4.9e-1338.79Show/hide
Query:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSM
        S   +TS    A  +   D   ME    N + +++D YL E  +   + FD LD WK N  +Y  LSK+ARD+L+IPVS  A + +F    R +D +++ 
Subjt:  STSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASE-LFSTSGRVIDPFRSM

Query:  LAPTIVEALVCAQNWL
        L P  VEAL+CA+ WL
Subjt:  LAPTIVEALVCAQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAATCTTCAAGTTGTACTACTAGTATAAGTACAAGTACAAGTACTAGTACTGCAGCTACTGCTTCAGAGGTTTTTCGTTTGGATTTTGAAGATATGGAGGACGA
GGATGCCAACAGTGTGGATACAAAAGTTGATATTTACTTATTGGAGCCTCGTATTAAATGTGAGGAGAATTTTGATTTCTTAGATTGTTGGAAAGGAAATTCTTCTAGAT
ATAAGGTTCTTAGCAAGGTTGCACGAGATCTTTTAGCAATTCCAGTATCCACAGTTGCTTCTGAGTTGTTCAGTACCAGTGGGAGAGTAATTGATCCTTTTCGTTCTATG
TTAGCTCCAACCATAGTTGAAGCACTTGTGTGTGCACAAAATTGGTTACGTTCGAAAGCAATTAGCGTTGATCTTCAAAGCTACTTGGAGGATATTGTAAATGTTGAAGA
AGGATACCCCTACTCGCATGTCCCTGACATGAATGTGTTGGATCGTTGCATTTGTATCAAATACAAAGTGGGTTGTATCCATAGTGTCACCAGGATAAGGTATCCAGCCT
TATCCCTTTACTATAGACCCTTAGGCTGTAACTTGAACAATGATCCCCGTATGTCTCCACATACCGTTCAAGACTCATTGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAATCTTCAAGTTGTACTACTAGTATAAGTACAAGTACAAGTACTAGTACTGCAGCTACTGCTTCAGAGGTTTTTCGTTTGGATTTTGAAGATATGGAGGACGA
GGATGCCAACAGTGTGGATACAAAAGTTGATATTTACTTATTGGAGCCTCGTATTAAATGTGAGGAGAATTTTGATTTCTTAGATTGTTGGAAAGGAAATTCTTCTAGAT
ATAAGGTTCTTAGCAAGGTTGCACGAGATCTTTTAGCAATTCCAGTATCCACAGTTGCTTCTGAGTTGTTCAGTACCAGTGGGAGAGTAATTGATCCTTTTCGTTCTATG
TTAGCTCCAACCATAGTTGAAGCACTTGTGTGTGCACAAAATTGGTTACGTTCGAAAGCAATTAGCGTTGATCTTCAAAGCTACTTGGAGGATATTGTAAATGTTGAAGA
AGGATACCCCTACTCGCATGTCCCTGACATGAATGTGTTGGATCGTTGCATTTGTATCAAATACAAAGTGGGTTGTATCCATAGTGTCACCAGGATAAGGTATCCAGCCT
TATCCCTTTACTATAGACCCTTAGGCTGTAACTTGAACAATGATCCCCGTATGTCTCCACATACCGTTCAAGACTCATTGGCCTAG
Protein sequenceShow/hide protein sequence
MSQSSSCTTSISTSTSTSTAATASEVFRLDFEDMEDEDANSVDTKVDIYLLEPRIKCEENFDFLDCWKGNSSRYKVLSKVARDLLAIPVSTVASELFSTSGRVIDPFRSM
LAPTIVEALVCAQNWLRSKAISVDLQSYLEDIVNVEEGYPYSHVPDMNVLDRCICIKYKVGCIHSVTRIRYPALSLYYRPLGCNLNNDPRMSPHTVQDSLA