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ClCG08G006080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G006080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:18354364..18354753
RNA-Seq ExpressionClCG08G006080
SyntenyClCG08G006080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578935.1 hypothetical protein SDJN03_23383, partial [Cucurbita argyrosperma subsp. sororia]4.8e-1352.69Show/hide
Query:  DGSQQQMLSYFYKTSTQTCLFVIKSPTSNKFSDILMALNTAPLNKSIQFPATAIEISKPPKVATVIPARRKLVKTMMYHSVKDFLKSLFFPSP
        + S++ +L  F  T+  +   +    +S K S I MA  TAP NK I+FPATA+   KP KVATVIPARRKLV TMMY+S++DFLKSL   SP
Subjt:  DGSQQQMLSYFYKTSTQTCLFVIKSPTSNKFSDILMALNTAPLNKSIQFPATAIEISKPPKVATVIPARRKLVKTMMYHSVKDFLKSLFFPSP
KAG6602134.1 hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]2.4e-0474.29Show/hide
Query:  KVATVIPARRKLVKTMMYHSVKDFLKSLFFPSPET
        KV +VIP +RKLVKTMMYH +KDFLKSLF P P+T
Subjt:  KVATVIPARRKLVKTMMYHSVKDFLKSLFFPSPET
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTCTAAATAAATGGAATGGAGGGTTTAGAGTATTGATTTACCTTACCAAAGCTTCGAAGCTTCTTAGAAACCTTAACCCCGACACTGATGGTTCCCAACAACA
AATGCTTTCATACTTCTATAAAACTTCAACTCAGACTTGCTTATTTGTAATCAAATCTCCAACCTCAAACAAATTCAGTGACATTCTGATGGCTCTAAATACTGCCCCAC
TTAACAAGTCCATCCAATTTCCGGCCACCGCCATCGAAATTTCGAAACCGCCGAAGGTTGCCACTGTAATTCCGGCGAGAAGAAAGTTGGTGAAGACGATGATGTATCAC
TCTGTAAAGGACTTTCTCAAATCCCTGTTTTTTCCTTCGCCGGAAACCCAACACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTCTAAATAAATGGAATGGAGGGTTTAGAGTATTGATTTACCTTACCAAAGCTTCGAAGCTTCTTAGAAACCTTAACCCCGACACTGATGGTTCCCAACAACA
AATGCTTTCATACTTCTATAAAACTTCAACTCAGACTTGCTTATTTGTAATCAAATCTCCAACCTCAAACAAATTCAGTGACATTCTGATGGCTCTAAATACTGCCCCAC
TTAACAAGTCCATCCAATTTCCGGCCACCGCCATCGAAATTTCGAAACCGCCGAAGGTTGCCACTGTAATTCCGGCGAGAAGAAAGTTGGTGAAGACGATGATGTATCAC
TCTGTAAAGGACTTTCTCAAATCCCTGTTTTTTCCTTCGCCGGAAACCCAACACCCATGA
Protein sequenceShow/hide protein sequence
MSILNKWNGGFRVLIYLTKASKLLRNLNPDTDGSQQQMLSYFYKTSTQTCLFVIKSPTSNKFSDILMALNTAPLNKSIQFPATAIEISKPPKVATVIPARRKLVKTMMYH
SVKDFLKSLFFPSPETQHP