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ClCG08G006090 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G006090
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:18382128..18390274
RNA-Seq ExpressionClCG08G006090
SyntenyClCG08G006090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647260.1 hypothetical protein Csa_018328, partial [Cucumis sativus]1.8e-0556.14Show/hide
Query:  ADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPT
        +DL P+ PV +  +PV      GG   KSVIPK+R LVKTMIYHS+K++L+SLFRP+
Subjt:  ADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPT

KAE8647261.1 hypothetical protein Csa_018288 [Cucumis sativus]1.8e-0546.67Show/hide
Query:  MQSTLFSGNPIVVVADGADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        M+  +FSGN  V+           P  S+TA +    Y G GN KSVIPK+R LVK M+Y  IK W+ SLF PTP
Subjt:  MQSTLFSGNPIVVVADGADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0552.24Show/hide
Query:  VADG--ADLAPNNPVNSDTA--PVTAIGYRGG-GNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        VADG    + P  P   +TA     ++GYR G G  KSVIPK+R LVKTM+YH IKN++ SLFR  P
Subjt:  VADG--ADLAPNNPVNSDTA--PVTAIGYRGG-GNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

TYK18680.1 hypothetical protein E5676_scaffold481G00190 [Cucumis melo var. makuwa]1.9e-0762.5Show/hide
Query:  NNPV---NSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        NNPV    + TA   AI YRG GN KSVIPK+R LVK M+Y  IK W+ SLFRPTP
Subjt:  NNPV---NSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

XP_022141661.1 uncharacterized protein LOC111011963 [Momordica charantia]1.7e-1163.08Show/hide
Query:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        +ADG +LAPNNPV      VT   AIG R GG  KSVIPKRR+LVKTMIY+ IK++++SLFRP P
Subjt:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein8.6e-0656.14Show/hide
Query:  ADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPT
        +DL P+ PV +  +PV      GG   KSVIPK+R LVKTMIYHS+K++L+SLFRP+
Subjt:  ADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPT

A0A0A0KFQ1 Uncharacterized protein8.6e-0646.67Show/hide
Query:  MQSTLFSGNPIVVVADGADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        M+  +FSGN  V+           P  S+TA +    Y G GN KSVIPK+R LVK M+Y  IK W+ SLF PTP
Subjt:  MQSTLFSGNPIVVVADGADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

A0A5D3D590 Uncharacterized protein9.2e-0862.5Show/hide
Query:  NNPV---NSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        NNPV    + TA   AI YRG GN KSVIPK+R LVK M+Y  IK W+ SLFRPTP
Subjt:  NNPV---NSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

A0A6J1CJW3 uncharacterized protein LOC1110119638.1e-1263.08Show/hide
Query:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP
        +ADG +LAPNNPV      VT   AIG R GG  KSVIPKRR+LVKTMIY+ IK++++SLFRP P
Subjt:  VADGADLAPNNPVNSDTAPVT---AIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTGCAGAGACTTGTCGGGCAACAATCAGGTGCTACCCCAACCAGGTTGGATCTCCGACAATCCGGCCGTGGTCGGCGCCGACGAAATTGGGTACAGAGGC
GCCGGAAAAATGAAATCTGTGATACCCAAGAGGAGGATGTTGAATTTAGCTTATGAATCTCCCCTTACGGAAATCCTTGTCATTGCCCAACGAATTCGTCTTGCA
GCTTCCCTTTCGTGCCCTAACATTTGTATTAGCAACAATAATGCTCTTTACATGTTTAAGTTGTTAGATTGGTGTGGTACATTAGAGGTAGTTTCTGAAGAACTC
TTAACCATGCAATCCACACTCTTTTCCGGCAACCCCATCGTCGTCGTCGCTGACGGTGCCGATCTTGCTCCAAACAATCCGGTGAATTCAGACACAGCTCCGGTG
ACGGCGATTGGGTACAGAGGCGGTGGAAATACGAAATCTGTGATACCCAAGAGGAGGGTGTTAGTGAAGACGATGATTTACCATTCTATTAAAAACTGGCTCCTA
TCCCTCTTTCGTCCCACGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACTGCAGAGACTTGTCGGGCAACAATCAGGTGCTACCCCAACCAGGTTGGATCTCCGACAATCCGGCCGTGGTCGGCGCCGACGAAATTGGGTACAGAGGC
GCCGGAAAAATGAAATCTGTGATACCCAAGAGGAGGATGTTGAATTTAGCTTATGAATCTCCCCTTACGGAAATCCTTGTCATTGCCCAACGAATTCGTCTTGCA
GCTTCCCTTTCGTGCCCTAACATTTGTATTAGCAACAATAATGCTCTTTACATGTTTAAGTTGTTAGATTGGTGTGGTACATTAGAGGTAGTTTCTGAAGAACTC
TTAACCATGCAATCCACACTCTTTTCCGGCAACCCCATCGTCGTCGTCGCTGACGGTGCCGATCTTGCTCCAAACAATCCGGTGAATTCAGACACAGCTCCGGTG
ACGGCGATTGGGTACAGAGGCGGTGGAAATACGAAATCTGTGATACCCAAGAGGAGGGTGTTAGTGAAGACGATGATTTACCATTCTATTAAAAACTGGCTCCTA
TCCCTCTTTCGTCCCACGCCGTAG
Protein sequenceShow/hide protein sequence
MHCRDLSGNNQVLPQPGWISDNPAVVGADEIGYRGAGKMKSVIPKRRMLNLAYESPLTEILVIAQRIRLAASLSCPNICISNNNALYMFKLLDWCGTLEVVSEEL
LTMQSTLFSGNPIVVVADGADLAPNNPVNSDTAPVTAIGYRGGGNTKSVIPKRRVLVKTMIYHSIKNWLLSLFRPTP