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ClCG08G006110 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG08G006110
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr08:18403504..18408146
RNA-Seq ExpressionClCG08G006110
SyntenyClCG08G006110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647204.1 hypothetical protein Csa_019006, partial [Cucumis sativus]5.8e-1162.32Show/hide
Query:  ESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGPP
        + ++  VAEASN AV M +GYK G  KM SVIP +RKLVKTMMYHSIK F+ISFFR   S   G G PP
Subjt:  ESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGPP
KAG6578934.1 hypothetical protein SDJN03_23382, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1048.45Show/hide
Query:  PTAVDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGP
        PTA  +P VG +KFP +++  S+PA+  RP GES     AE +NR V           +  SVIP KR+LVKTMMYH++K+F+ S FR  PSAGA P
Subjt:  PTAVDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGP
KAG6578935.1 hypothetical protein SDJN03_23383, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1048.08Show/hide
Query:  IPILAPTA--VDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSA
        IP+  PT     +P VG KKFP  ++  S+PA+  RP  ES    VAE +NR V           +  SVIP KR+LVKTMMYHS+K+F+ S FR  PSA
Subjt:  IPILAPTA--VDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSA

Query:  GAGP
        GA P
Subjt:  GAGP
KAG6602131.1 hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]4.3e-0633.33Show/hide
Query:  MHFRVLPDVNRVSDLPPNEPAIGYRVGGLPYIAPSSVAGAPRPPPTHCRRFLKFADKIPSIPILAPTAVDVPEVGGKKF----------PVNLMTQSEPA
        M FRV PD NRV  LP   P   Y    LP I  + +A    P  +      K     P+IP          +VG  K           P   +  + PA
Subjt:  MHFRVLPDVNRVSDLPPNEPAIGYRVGGLPYIAPSSVAGAPRPPPTHCRRFLKFADKIPSIPILAPTAVDVPEVGGKKF----------PVNLMTQSEPA

Query:  VKGR-PEGESMDVVVAEASNRAVPM----AVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGP
        V  +  +G++  V+    +     +    ++GY+ G  K+ SVIP KRKLVKTMMYH IK+F+ S FR PP     P
Subjt:  VKGR-PEGESMDVVVAEASNRAVPM----AVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGP
KGN47677.1 hypothetical protein Csa_018325 [Cucumis sativus]1.8e-2064Show/hide
Query:  VDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVA---EASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGP
        +DVP VGG++FP+NLMT SE  ++ RPEGESM VV A   EAS+R V MA+GYK GG KM SVIPMKRKLVK MMY SIK+FVIS F   PS G+    P
Subjt:  VDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVA---EASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGP
TrEMBL top hitse value%identityAlignment
A0A0A0KDQ7 Uncharacterized protein2.5e-0471.43Show/hide
Query:  KVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFR
        +VGG K+ SVIP +RKLVKTM+YHS+KDF+IS FR
Subjt:  KVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFR
A0A0A0KH01 Uncharacterized protein8.7e-2164Show/hide
Query:  VDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVA---EASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGP
        +DVP VGG++FP+NLMT SE  ++ RPEGESM VV A   EAS+R V MA+GYK GG KM SVIPMKRKLVK MMY SIK+FVIS F   PS G+    P
Subjt:  VDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVA---EASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGP
A0A6J1CJW3 uncharacterized protein LOC1110119631.8e-0544.05Show/hide
Query:  LMTQSEPAVKGRPEGESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGPP
        ++ + EP   G     +  V+++E +  A   A+G + GG K+ SVIP +R LVKTM+Y+ IKDF+IS FR PPSA   P  PP
Subjt:  LMTQSEPAVKGRPEGESMDVVVAEASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCAGAGTGTTGCCGGACGTCAATCGGGTCTCCGATCTTCCTCCGAACGAGCCGGCGATTGGGTACAGAGTAGGCGGACTTCCTTATATCGCTCCTTCG
TCCGTCGCCGGAGCTCCACGACCGCCGCCAACCCATTGCCGAAGATTTCTAAAATTCGCCGACAAAATTCCCTCAATTCCGATTCTGGCTCCCACCGCGGTGGAC
GTGCCGGAGGTGGGAGGTAAAAAGTTTCCGGTGAACTTAATGACCCAATCAGAACCGGCCGTGAAGGGGAGACCCGAAGGAGAGTCGATGGATGTGGTGGTGGCA
GAAGCGTCGAATCGGGCGGTTCCAATGGCTGTCGGGTACAAAGTCGGCGGTGCAAAAATGGGATCTGTGATTCCGATGAAGAGGAAGTTAGTGAAGACAATGATG
TATCACTCCATAAAGGATTTTGTTATATCATTCTTCCGTACGCCGCCGTCCGCCGGCGCCGGTCCCGGAGGTCCACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCAGAGTGTTGCCGGACGTCAATCGGGTCTCCGATCTTCCTCCGAACGAGCCGGCGATTGGGTACAGAGTAGGCGGACTTCCTTATATCGCTCCTTCG
TCCGTCGCCGGAGCTCCACGACCGCCGCCAACCCATTGCCGAAGATTTCTAAAATTCGCCGACAAAATTCCCTCAATTCCGATTCTGGCTCCCACCGCGGTGGAC
GTGCCGGAGGTGGGAGGTAAAAAGTTTCCGGTGAACTTAATGACCCAATCAGAACCGGCCGTGAAGGGGAGACCCGAAGGAGAGTCGATGGATGTGGTGGTGGCA
GAAGCGTCGAATCGGGCGGTTCCAATGGCTGTCGGGTACAAAGTCGGCGGTGCAAAAATGGGATCTGTGATTCCGATGAAGAGGAAGTTAGTGAAGACAATGATG
TATCACTCCATAAAGGATTTTGTTATATCATTCTTCCGTACGCCGCCGTCCGCCGGCGCCGGTCCCGGAGGTCCACCGTAA
Protein sequenceShow/hide protein sequence
MHFRVLPDVNRVSDLPPNEPAIGYRVGGLPYIAPSSVAGAPRPPPTHCRRFLKFADKIPSIPILAPTAVDVPEVGGKKFPVNLMTQSEPAVKGRPEGESMDVVVA
EASNRAVPMAVGYKVGGAKMGSVIPMKRKLVKTMMYHSIKDFVISFFRTPPSAGAGPGGPP